Marinobacter alkaliphilus: PBN92_13825
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Entry
PBN92_13825 CDS
T08753
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
mall
Marinobacter alkaliphilus
Brite
KEGG Orthology (KO) [BR:
mall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mall03016
]
PBN92_13825 (cmoB)
Transfer RNA biogenesis [BR:
mall03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
PBN92_13825 (cmoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_31
Methyltransf_12
CMAS
Ubie_methyltran
NpmA
PCMT
PrmA
Motif
Other DBs
NCBI-ProteinID:
WBU40165
LinkDB
All DBs
Position
3054510..3055502
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AA seq
330 aa
AA seq
DB search
MALFDWRAHFLPFIDFLQQSGHEPWAERLTRQLIARFEDNPHGDLPRWQSALDLLPEVPG
VAADLNCSAITLSAPDPLTQAQSESLEQGLRGLMPWRKGPFEFFGTHIDTEWRSDWKWDR
VAPHLSDLRGRTILDVGCGSGYHCWRMAGAGAGRVVGIDPGLLFMFQFLAVKGYLGEVPV
DLLPVRMEDLPDNLQMFDTTFSMGVLYHRRSPLDHLLELKGTLRPGGELVLETLVVDGPE
GFSLMPEDRYGQMRNVWFLPSCPTLLRWLDRTGFRNARVADVSDTTTEEQRQTDWMRFNS
LADFLDPNDSSKTIEGYPGPKRATIIAEKP
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcacttttcgactggcgagcgcactttctcccgttcatcgacttcctgcaacagtcc
gggcatgagccctgggcagagcggcttacccgccaactgattgcccggtttgaagacaac
ccccacggcgacctgccccgctggcaaagcgcactggatttgttacccgaggtgcccggt
gttgccgctgacctgaactgttccgccattaccctgtcggctcccgacccactgacccag
gcgcagagtgaaagtctagaacagggcctgcggggcctgatgccctggcgaaaaggccca
ttcgagttcttcggcacccacatagacaccgaatggcgatcagactggaaatgggaccgg
gttgctcctcatctgtcagacctcaggggcagaaccattctcgacgttggctgcggctcc
ggctaccactgctggcgcatggccggggctggcgccggccgcgttgtaggcatcgacccc
ggtctgctgttcatgttccagtttctggcagtcaagggttacctgggtgaggttccggta
gacctgctaccggtgcgaatggaggacttaccggacaacctgcagatgttcgacaccacc
ttttcgatgggtgttctgtaccaccgtcgctcgcccctggaccaccttctggaactcaag
ggcaccctccgcccaggcggcgaattggtactggaaaccctggtggttgacggtccggaa
ggcttcagtctgatgccggaagaccgctacggccagatgcgcaatgtctggttcctaccc
agttgccccaccctcttacgctggctggacagaaccgggtttcgcaatgcgcgggtggcg
gatgtcagcgacaccaccaccgaggaacaacggcagacggactggatgcgtttcaactct
ctggcggattttctcgacccgaacgattcgagcaaaaccatcgaaggctatccgggaccc
aagcgcgcaaccatcatcgccgagaagccctga
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