Marinobacter alkaliphilus: PBN92_14135
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Entry
PBN92_14135 CDS
T08753
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
mall
Marinobacter alkaliphilus
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_16
HTH_29
AAA_5
Xre-like-HTH
HTH_23
HTH_28
AAA
HTH_17
VpsR
AAA_2
RsmI_C
HTH_Tnp_1_2
AAA_30
HK
AAA_22
AAA_7
HTH_psq
LSDAT_prok
HTH_Tnp_IS630
Motif
Other DBs
NCBI-ProteinID:
WBU40226
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Position
complement(3129575..3130960)
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AA seq
461 aa
AA seq
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MSDSVATILLVEDDQSLGQLLAEELEMDGYTMLRAGTVDEARQQLREQRPSLIVSDLRLP
DGDGLQVLSFQQAEHPGIPFIVITAFGTVDQAVDALKAGADDFLTKPLSTDHLRLKIKRL
LAQADINRQLAEIQASQNGGNNLGLVGDSPAMARLRTEIRQVARSQAAVLINGESGTGKE
LVARAVHQQSDRAGQAFLAVNCAGIPPDLMESEFFGHEAGAFTGARQGRKGLFAEASGGT
LLLDEIGEMPLALQAKLLRVLQEGSIKPVGSDHEETVDVRILAATHVDLMKAVEQGEFRE
DLYYRLETLSLGIPPLRERGEDVELLAMHFLKEACRRHNRGFIKLSDVTLRVLRDYPFPG
NVRELSSAVERAVTFCEGDTIQPEHLPERIRKRQGVSPQPLAAPGSVNLSEWPTLEALQQ
DYVRRVMAAVDGNKRRAAQILGINRRTLYRWLETETGSAND
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattcggtagcaaccatactactggttgaggatgaccagagcctgggccagttg
ctggccgaagagctggagatggacggttacaccatgctccgggccgggaccgttgatgag
gcccggcagcagctgcgggaacaacggccaagcctgatcgtctcggacctgcgactgccg
gatggcgacggcctgcaggtgctgtcgtttcagcaggcagagcatccgggcattcccttt
atcgtgattaccgcctttggcacggtcgatcaggcggtggatgcactgaaagccggtgcc
gatgattttctgaccaagccactttcgacggaccacctgaggctcaagataaagcggctg
ttggcccaggcggacatcaaccggcagttggcggagattcaggccagtcagaatggtgga
aataacctgggcctggtgggcgacagtccggccatggcgcgcttgcgcaccgaaatccgg
caggtggcccgtagccaggcggcggttctgatcaacggtgaaagcgggaccggcaaggag
ctggtggcccgggcagtgcaccagcagagtgatcgggccgggcaggcgttcctggccgta
aactgtgcgggcattccgccggacctgatggaaagtgaattctttggccatgaagccggc
gcctttaccggcgccagacaggggcgcaaggggctgtttgcggaagccagtggtggcacc
ttgttgctggacgagattggtgagatgcccctggctctgcaggccaagctgctacgggtg
cttcaggaaggctccatcaagccggtcggctctgatcatgaggaaaccgtggatgtgcgg
attctcgccgccacccacgttgatcttatgaaggcggtggagcagggggagttccgggag
gatctgtactatcgcctggaaaccctgtctctcggtattccgccacttcgggaacggggt
gaggatgttgaattgctggccatgcatttcctcaaggaagcctgccgccgccacaaccgg
gggtttatcaaactcagtgatgtgacccttcgagtgcttcgggactatccgttccctggt
aacgttcgggagttgtccagtgccgttgagcgggcggttaccttctgcgagggcgatacc
attcaaccggagcatttgccggagcgcatccgaaagcgtcagggggtctctccccagcct
ttggcggcaccgggttcggtcaatctgtcagagtggccaacgctggaggccttacagcag
gactatgtgcgccgggtgatggcggcggtggatggcaataaacgccgggcggcacagatt
ctcggtatcaaccgccgcacactctaccgttggctggagacggaaacagggtcggccaat
gactaa
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