Marinobacter alkaliphilus: PBN92_16630
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Entry
PBN92_16630 CDS
T08753
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mall
Marinobacter alkaliphilus
Pathway
mall03030
DNA replication
mall03430
Mismatch repair
mall03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PBN92_16630
03430 Mismatch repair
PBN92_16630
03440 Homologous recombination
PBN92_16630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mall03032
]
PBN92_16630
03400 DNA repair and recombination proteins [BR:
mall03400
]
PBN92_16630
Enzymes [BR:
mall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PBN92_16630
DNA replication proteins [BR:
mall03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PBN92_16630
DNA repair and recombination proteins [BR:
mall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PBN92_16630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
GIY_YIG_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WBU40705
LinkDB
All DBs
Position
complement(3646762..3648213)
Genome browser
AA seq
483 aa
AA seq
DB search
MTKKPVLLSNETFAFLDIETTGGNPQRDRITEIGIRFWRAGEVVGEWQTLLNPEVRISGF
IERLTGISNELVEDAPLFSDIADELESQLAGVIFVAHNARFDYGFIKSEFRKLGRAFSAR
VLCTVRLSRVLYPEHSRHNMDALINRHNLPLVERHRAMGDVSAMLAFFEHTLVEHGTDTV
NQAIQRLLQRQSTPSNVPPEILAELPQGPGVYRFYGDNDALLYVGKSTNIAQRVASHFAG
DHQSTRGLRMSESLRRVEFTETAGELGALLLELKQIKSLNPLYNRRSRAAKNLVSIALTT
NKEGYLQAELARKVVPDQLGDYFGLFRSKRDALGAIRGIAGKNDLCGKLLGLEPAGAGPC
FQRSLGRCKGACEGAEDNTRYNLRMQIAFHSLRLKTWPWPGPVALVEENRDTDRTDILVV
YNWVHIATLHGEEELNDFEPGSDPVTFDLDSYKLLVKALLGRDKKPYRIIELPPLTQPAV
LMP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaaacctgtgcttctcagtaacgaaacatttgctttccttgatatcgaaacc
accggcggcaatccgcagcgagacaggattaccgagatcggtatccggttctggcgggcc
ggagaggtggtgggggaatggcaaaccctgctgaacccggaggtgcggatctccggtttt
attgaaaggctgacgggcatcagcaacgagttggtggaggatgccccgctgttttcagat
attgccgatgagctggagagtcagttggctggcgtgatctttgttgcccataacgcccgc
ttcgattacggcttcattaaatctgaattccgcaaactggggcgagcgttcagcgcccgg
gtgttgtgcacggtcaggctgtcccgggtgctctatcctgaacacagccgccacaatatg
gatgccctgatcaaccgccacaacctgccgctggtggagcgtcaccgggccatgggcgac
gtttccgccatgctggcgttcttcgagcatactctggttgaacatggcaccgacacggtg
aaccaggccatccagcgactgcttcaacgccagagtacgccttctaatgtgccgccagag
atcttagcggagttgccgcaggggccgggtgtttaccgattttacggtgacaacgatgcg
ctgctgtacgtgggcaaaagcaccaacattgcccaacgggtggcctcgcattttgccggt
gatcaccagtccacccgagggttacgcatgtcagaaagtctgcgccgggtggagtttacg
gaaaccgccggtgagctgggcgccttgttgctggaactgaaacagatcaaaagcctgaac
ccgctctacaaccgccgctcccgtgctgccaagaacctggtcagcatcgcactgacgact
aataaagagggctatctgcaggcggaactggcgcgaaaagtggtgccggaccagctcggg
gattacttcggattgttccgcagcaaacgcgatgcgctgggcgccattcgcggcattgcc
ggcaagaacgacctgtgcggcaaactgctcgggttggaaccagccggtgcgggcccatgc
ttccaacgcagcctgggtagatgcaaaggcgcctgcgagggcgcagaagacaacacccga
tacaacctgagaatgcagatcgccttccacagcctgcgcctgaaaacctggccctggccc
gggcccgtcgccctggtggaagagaaccgcgacaccgaccgcaccgatattctggttgtc
tacaactgggtgcacatcgccaccctgcacggcgaggaggaactgaacgactttgaaccg
gggtctgaccccgtcacctttgatctcgactcctacaaactgctggtcaaagccctgctg
ggccgcgataaaaagccgtatcgaatcatcgaactaccacctttgacgcaaccggctgtt
cttatgccgtga
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