Marinobacter alkaliphilus: PBN92_16765
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Entry
PBN92_16765 CDS
T08753
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mall
Marinobacter alkaliphilus
Pathway
mall03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mall00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PBN92_16765 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mall03019
]
PBN92_16765 (pnp)
03016 Transfer RNA biogenesis [BR:
mall03016
]
PBN92_16765 (pnp)
Enzymes [BR:
mall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PBN92_16765 (pnp)
Messenger RNA biogenesis [BR:
mall03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PBN92_16765 (pnp)
Transfer RNA biogenesis [BR:
mall03016
]
Prokaryotic type
tRNA degradation factors
PBN92_16765 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
WBU43288
LinkDB
All DBs
Position
complement(3683723..3685837)
Genome browser
AA seq
704 aa
AA seq
DB search
MQPRKKTFEMGGETFTLETGRVARQATGSVLVSTGDTAVLGTVVGAKEAKPGQPFFPLTV
NYFEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPNGYMNEVQVICTVMSAS
KNHDPDIAAMLAASAALAISGIPFDGPIGAARVGFTNDKGYFLNPTFEELASSDLDMVVA
GTEDAVLMVESEAKGLTEDQMLGGVLFGHQEMQAAITAIKEFAAEHGKPRWEWQPEAENT
ELLNAIKSEFGGAIEEAYAVRDKMARYERLGEIKAAAVEKLAGEEEGQPSEELVKKYFGK
VEKSVVRQQVIDGKPRIDGRDNKTVRPIEVEVGILPSVHGSALFTRGETQAIVTATLGTT
RDVQIIDALEGERKDPFLFHYNFPPYSVGEAGRVGTPGRREVGHGRLAKRGVLAVMPTIE
EFPYAIRAVSEITESNGSSSMASVCGSSLALMDAGVPVKAPVAGIAMGLVKEGDKFAVLT
DILGDEDHLGDMDFKVAGTKEGVTALQMDIKIQGITDEIMEIALEQAHAARLHILDEMNK
VISTPRAELSERAPSITTIKIHPDKIRDVIGKGGSVIRSICDETGASIDLDDDGNVKIYA
DNAAAAQAAVNRVKEITAEIEVGAIYKGRVERIVDFGAFVNILPGKDGLVHISQISERRI
ENVTDELSEGQEVLVKVLDVDNRGRVKLSMKEVKEGEQPTDFAD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ctgcaaccacgtaagaaaacgtttgaaatgggtggcgaaaccttcaccctggaaacgggt
cgtgttgcccgtcaggcaaccggttccgttctcgtgtctaccggcgataccgctgtgctg
ggtaccgttgtcggcgccaaagaagccaagcctggtcagcctttcttcccgctgaccgtt
aactacttcgagaagacttacgcggccggcaaaatccccggtggtttcttcaagcgcgaa
ggccgtccgtccgagaaagagacgctgacttcccgcctgatcgaccgtccgatccgcccg
ctgttccctaatggctacatgaacgaagtacaggttatctgtaccgtcatgtctgccagc
aagaaccacgatcctgacatcgcggcgatgctggcggcctctgctgcgctggcgatctcc
ggtatcccgttcgatggtcctatcggtgccgcccgtgttggtttcaccaacgataaaggc
tacttcctgaaccccacctttgaagagctggccagctctgatctggacatggtggttgcc
ggtaccgaagacgccgtactgatggttgagtccgaggccaaaggcctgaccgaagaccag
atgctgggtggcgtactgttcggccatcaggaaatgcaggcggccattaccgccatcaag
gaatttgccgctgaacacggcaagccgcgctgggagtggcagcctgaagccgaaaacacc
gagcttctgaatgccatcaaatccgaattcggtggtgccatcgaagaagcttacgccgtg
cgcgacaagatggctcgctacgagcgtctgggcgagatcaaggctgccgccgttgaaaaa
ctggccggtgaagaagaaggtcagccttctgaagaactggtgaagaagtatttcggcaag
gttgagaagtctgtggttcgccagcaggttatcgatggcaagccgcgtatcgacggccgt
gacaacaagactgtacgcccgatcgaagtggaagttggcattctgccgtctgttcacggt
tctgccctgttcacccgtggtgaaactcaggccatcgtaaccgccactctgggtaccacc
cgtgatgtgcagatcattgatgcactggaaggcgagcgcaaagacccgttcctgttccac
tataacttccctccgtattccgtaggtgaagccggccgcgttggtactccgggccgtcgt
gaagtgggtcatggtcgtctggccaagcgtggtgttctggcggttatgccgaccattgaa
gagttcccgtatgccattcgtgcggtttccgagatcaccgaatccaacggttccagctcc
atggcttccgtgtgtggttcttctctggcactgatggacgcgggtgttccggtcaaggca
ccggtggctggtatcgccatgggtctggtcaaggaaggtgacaagttcgccgttctgact
gacatcctgggtgacgaagaccacctgggcgatatggacttcaaggttgccggtaccaaa
gagggcgttaccgccctgcaaatggatatcaagatccagggcatcaccgacgagatcatg
gaaatcgcccttgagcaggcccacgctgcgcgtctgcacatcctggacgagatgaacaag
gtgatctccacgccgcgtgccgagctgtctgagcgtgcaccgagcatcaccaccatcaag
atccatccggacaagatccgtgacgttatcggtaagggcggttctgtgatccgttctatc
tgtgacgagaccggtgcgtctattgacctggacgacgatggcaatgtgaagatctatgcc
gataacgcagcagccgcacaagccgccgtgaatcgggtgaaggaaatcaccgccgagatc
gaagtgggcgcaatctacaagggccgcgttgagcgcattgtggacttcggtgccttcgtt
aacatcctgcctggcaaggatggtctggtgcacatttcccagatctccgagcgccgtatc
gagaacgtgactgacgagctgagcgaaggtcaggaagttctggtgaaggtgctggatgtg
gacaaccgtggtcgcgttaagctgtccatgaaggaagttaaggaaggcgagcagccgact
gacttcgctgactga
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