Marinobacter alkaliphilus: PBN92_16775
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Entry
PBN92_16775 CDS
T08753
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mall
Marinobacter alkaliphilus
Brite
KEGG Orthology (KO) [BR:
mall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mall03016
]
PBN92_16775 (truB)
Enzymes [BR:
mall01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PBN92_16775 (truB)
Transfer RNA biogenesis [BR:
mall03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PBN92_16775 (truB)
Prokaryotic type
PBN92_16775 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
WBU40733
LinkDB
All DBs
Position
complement(3686555..3687478)
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AA seq
307 aa
AA seq
DB search
MSRRRKGRDVNGILVIDKPQGVTSNGILQQIKRLYGAAKAGHTGALDPLATGVLPLCFGE
ATKFSQTMLDSDKAYITTARLGIRTETGDSEGAVVEEKPVPALTEAQVEAVLERFRGDIQ
QVPSMYSALKHKGRPLYEYAREGIEIERPARPVTIYELTLLAVREQELDLAVTCTKGTYI
RSLVEDIGAVLGCGAHVSALRRTLASGYTLENAHDVKDLEAMRERGESLDGLLLPPESAL
TMFPEYRLSGSALVSILNGQPVRIPGQSLEGFVRVYGDRNFVGLAEAMPEGDDTKLVPRR
LVKNSGG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttgagccgaagacgtaaaggccgtgacgtaaatggcatcctggtgatcgacaagccccag
ggtgtcacctccaacgggattctgcagcagatcaagcgcctgtatggggcggccaaggcc
ggccataccggtgcccttgatccacttgctactggtgttttgccgctgtgttttggcgaa
gccaccaagttttcccagaccatgctcgacagtgacaaggcgtatatcactaccgcgcgg
ttgggcatacggacagaaaccggtgatagcgaaggcgcagtggttgaagaaaaaccggtg
ccagcgttgaccgaagcccaggtggaagcggtgttagagcggtttcggggcgatatccag
caggtaccgtcgatgtattccgcgctgaagcacaaaggccggccactgtacgagtatgcc
cgcgaaggcattgagatcgagcgcccggcgcgtcctgtcaccatctacgagttgaccctg
ttggcggttcgcgagcaggagcttgacttggcggtgacctgtaccaagggtacgtatata
cgctcactggttgaagatattggtgcggtacttgggtgcggtgcccatgtcagtgcactt
cggcgtaccctggcctctggctacacgctggaaaatgctcacgatgtcaaagacctggaa
gccatgcgtgagcgcggtgagagcctggacggcttgctgctgccgccggaaagcgcgctg
acgatgtttcccgagtaccggctttctggctcggcactggtatcgatattgaacggacaa
ccggttagaataccgggtcagtcccttgaaggcttcgtgcgtgtctacggcgatcgtaac
ttcgtgggattggcagaagctatgccggagggcgatgacaccaaactggtgccgcgccgt
ctggtgaagaacagtggcgggtaa
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