Microbacterium albipurpureum: QSU92_02265
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Entry
QSU92_02265 CDS
T10962
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
malp Microbacterium albipurpureum
Brite
KEGG Orthology (KO) [BR:
malp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malp03019
]
QSU92_02265 (hrpA)
Enzymes [BR:
malp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QSU92_02265 (hrpA)
Messenger RNA biogenesis [BR:
malp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QSU92_02265 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_19
AAA_22
WHD_HA2
nSTAND_NTPase5
ResIII
T2SSE
nSTAND3
NACHT
AAA_30
SLFN-g3_helicase
FtsK_SpoIIIE
SRP54
TsaE
Motif
Other DBs
NCBI-ProteinID:
WJL96055
LinkDB
All DBs
Position
451070..454903
Genome browser
AA seq
1277 aa
AA seq
DB search
MPTTVPVITYPPELPVSAARDEIAAAIRDHQVVIVAGATGSGKTTQLPKICLELGRERIA
HTQPRRIAARSIAERIAEELEVPLGGTVGYKVRFTDQVSDDTRVALMTDGILLNEIHRDR
LLRRYDTIIVDEAHERSLNVDFLIGYLTRILPKRPDLKVIITSATIDPQSFAAHFADRSG
TPAPIIEVSGRTYPVEIRYHPQTEAADDDIDGLLAALRELDREPAGDVLVFLPGEAEIRD
AMDAVRGMYAKDASPTEVLPLYGRLTSAEQHRVFERSTTPGLRRRVILATNVAETSLTVP
GIRYVVDTGTARISRYSNRSKIQRLPIEPVSQASAQQRAGRAGRTAPGIAIRLYGEDDFT
ARPEFTEPEILRTSLAAVLLQMLSLGFGDVASFPFLTRPDSRGVKAALDLLTELGAVQAG
ERGPRLTEIGRRIARLPIDPRFARMLIEAERTKALGPVLAIVAGLSIQDVRERPEERREE
ADRLHARFTDPTSDFLTLLNLWNHLREQQSELGSSAFRRLCRSEHLNYVRVREWFDVHRQ
LSALLGARRADAAATADPDDVHRAILSGLLSQIGVLDERNRDPKRPAQGRAEYRGARGTR
FAMFPGSGLRKRRPAAVMAAELVETSRLFARTVAEIDPAWAEALAGDLAHRSVSEPHWSK
SAGAASAYEKITLFGVEIIPRRRVQLARFDRPLARELFLRHALVEGDVDLSHLDKRLSAF
ERRNTDLRRRLEKLEERERRRDILAGDEAVYAFYDARLPVDVFDVRSFERWWKDTSARTP
RLLDMTEADLLDDATRADERDFPTRWRQGDQVLSLAYRFEPGAPDDGVTVVIPLPLLAQL
RPDGFDWQVPGLRPELIAALIRSLPKAIRRHVVPAADWAARLGDELDGQGPESTDGLPAA
TLTAGLARLIQRAASQPVTTSDFDLERIPGHLLMSFRAVDERGRALGSDRDLAALQDRLR
GRARSSVARTLERPTDRVAAATAPGGPTLAERAGITTWDLGDLPAVVDTRVAGGVVRGYP
ALIDERDSVTLRIESTPDAAAAALRAGVRRLLLLAVPSPATYVLEHLTAPEKLALAASPY
PSARALIEDARSALADAVLDRVAGAEPVRTAAVFDRARAEFSRANVDELFALVSLAAKIL
TASRDVERAVREGTSMALLGALGDIKAQLASLIFPGFLSRTGTARLIHLPRYLRAAAERA
RALVDNPGRDRQRMTEFERAAAVFAEAGGSTPLPAGAPPALVRARWLLEEYRVSLFAQPL
GTAEPVSLQRIQKALRE
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgaccgtcccggtgatcacctacccccccgagctgcccgtcagcgcggcccgg
gatgagatcgccgccgccatccgcgaccaccaggtcgtgatcgtcgcgggggcgaccggg
tcgggcaagaccacgcagctgccgaagatctgcctcgagctcggacgggagcgcatcgcg
cacacccagccccgccgcatcgcggcgcgctcgatcgccgagcgcatcgcggaagagctc
gaggtgccgctcggcggcaccgtcgggtacaaggtccgcttcaccgaccaggtctccgac
gacacccgcgtcgcgctcatgaccgacgggatcctcctcaacgagatccaccgcgaccgg
ctgctgcgccgatacgacacgatcatcgtcgacgaggcgcacgagcggtctctgaacgtc
gacttcctgatcggctacctcacccgcatcctccccaagcgtcccgacctcaaggtcatc
atcacctcggcgacgatcgacccgcagagcttcgcggcccacttcgccgaccggtcgggc
accccggcgccgatcatcgaggtctcgggtcgcacctatccggtcgagatccgctaccac
ccgcagaccgaggcggccgacgacgacatcgacggactgctcgcggcactgcgcgaactc
gatcgcgagccggccggcgacgtcctcgtattcctgcccggcgaggcagagatccgcgac
gccatggatgccgttcgcggcatgtacgccaaggacgcctcgccgaccgaggtcctcccc
ctctacggccggctcacctcggccgagcagcatcgggtgttcgagcgatccacgaccccg
gggctccgtcgccgcgtcatcctcgccaccaacgtcgccgagaccagcctcaccgtgccc
ggcatccgatacgtcgtcgacaccggcacggcccgtatctcgcggtacagcaaccgcagc
aagatccagcggctgcccatcgagccggtgtcgcaggcatcggcacagcagcgcgccggc
cgcgcgggtcgcaccgcgccgggcatcgcgatccgcctctacggcgaagatgatttcacc
gcgcgtccggagttcaccgagcccgagatcctccgcacgagcctcgccgcggtgcttctg
cagatgctcagcctcggcttcggcgatgtggcgtccttcccgttcctgacccgccccgat
tcgcgcggcgtcaaggccgcgctcgacctcctcaccgagctcggggcggtgcaggccggc
gagcgaggtccgcgcctcaccgaaatcggacggcggatcgcccggctccccatcgacccg
cgcttcgcgcgcatgctgatcgaggccgagcgcacgaaggccctgggaccggtgctggcg
atcgtcgcgggcctgtccattcaggacgttcgcgagcggcccgaggagcgtcgcgaggag
gccgaccgcctgcatgcccggttcaccgatccgaccagcgacttcctgacactgctgaat
ctgtggaatcacctccgcgagcagcagtccgagctcggctcgagcgcgttccggcgcctg
tgccgcagcgagcatctgaactacgtccgggttcgggaatggttcgacgtccaccggcag
ctgagtgcgctgctgggcgcgagaagagcggatgccgcagccaccgccgatcccgatgac
gtccaccgcgcgatcctttcgggcctcctctcgcagatcggcgtcctcgacgagcggaac
cgtgatcccaagcgccccgcgcaggggcgtgcggagtaccgcggcgcgcggggcacccgc
ttcgcgatgttccccggctcggggctgcgcaagcggcgtccggcggcggtcatggccgcc
gaactcgtcgagacctcgcgcctgttcgcccgcaccgtggccgagatcgacccggcctgg
gcggaggccctcgccggcgatctcgcccaccgcagcgtcagcgaaccccactggtccaag
agcgccggcgcggcgtcggcgtacgagaagatcacgctgttcggagtggagatcatcccg
cggcgtcgcgtgcagctcgcccgattcgaccgcccgctcgcccgcgagctgttcctccgc
catgcgctcgtcgagggcgatgtcgatctgtcgcacctcgacaagaggctgagcgcgttc
gagcggcgcaacaccgaccttcgacgacgactggagaagctcgaggaacgcgagcgccga
cgcgacatcctcgccggcgacgaggccgtgtacgcgttctacgatgcgcgcctccccgtc
gacgtcttcgacgtgcgctccttcgagcgctggtggaaggacacctcggcccgcacaccg
cgccttctggacatgaccgaggccgacctcctcgacgacgccacgcgggccgacgagcga
gacttccccacgcggtggcggcagggtgaccaggtgctctccctcgcctaccggttcgaa
cccggcgctcccgatgacggcgtcaccgtcgtcatccccctgcctcttctggcacagctg
cgacccgacggcttcgactggcaggtcccgggccttcgccccgagctcatcgccgcactc
atccgctccctccccaaggccatccgccgtcacgtggtccccgctgccgactgggcggcg
cgcctcggcgacgagctcgacggtcagggcccggaatccaccgatgggctgccggcggcg
accctcaccgccggactcgcccgcctgatccagcgcgcggcgagccagcccgtcacgacg
tcggacttcgacctcgagcgcatccccgggcacctcctcatgtcgttccgcgcggtcgac
gagcgcggacgggcactcggcagcgaccgcgacctcgccgccctccaggaccgcctccgg
gggcgcgcccgctcgtcggtcgcccggaccctcgagcgtccgaccgatcgggtggccgcg
gcgacggcaccggggggccccaccctggcggaacgcgccggcatcaccacgtgggacctc
ggcgatctccccgccgtcgtcgacacgcgcgtcgcgggcggggtcgtgcgcggctacccc
gccctgatcgacgaacgcgacagcgtgacgctgcggatcgagtcgaccccggatgcggcg
gccgcggcgctgcgcgcgggcgtgcgccgtctgctgctgctcgcggtgccctcgcctgcg
acgtacgtcctggagcacctcaccgcgccggagaagctcgcgctcgcggcgagcccctac
ccctcggcgcgcgcactgatcgaggatgcgcgctccgccctggccgacgcggtcctcgat
cgagtggcgggcgcagagccggtgcggacggccgcggtcttcgaccgcgcccgcgcagag
ttctcccgggcgaacgtcgatgagctgttcgccctcgtctcgttggcggcgaagatcctc
accgcgtcccgcgacgtggagcgggcggtacgcgaggggacgtcgatggccctcctcgga
gcgctcggcgacatcaaggcgcagctcgcgagcctcatcttcccgggattcctctcccgc
acgggcacggcgcggctgatccacctcccccgctacctccgcgccgccgccgagcgggcg
cgggcactcgtcgacaaccccggccgagaccgacagcgcatgacggagttcgaacgggct
gccgcggtgttcgccgaggcgggcgggagcaccccgcttcccgcgggagcgccgcccgcc
ctcgtgcgcgcacggtggctgctggaggagtatcgcgtgagcctgttcgcccagcctctg
ggtacggccgagccggtctcgctgcagcggatccagaaggcgctgcgggaatag
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integrated database retrieval system
