Microbacterium albipurpureum: QSU92_03180
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Entry
QSU92_03180 CDS
T10962
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
malp Microbacterium albipurpureum
Brite
KEGG Orthology (KO) [BR:
malp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
malp03032
]
QSU92_03180 (topA)
03400 DNA repair and recombination proteins [BR:
malp03400
]
QSU92_03180 (topA)
Enzymes [BR:
malp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QSU92_03180 (topA)
DNA replication proteins [BR:
malp03032
]
Prokaryotic type
DNA Topoisomerases
QSU92_03180 (topA)
DNA repair and recombination proteins [BR:
malp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QSU92_03180 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Big_7
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WJL96218
LinkDB
All DBs
Position
complement(643521..646292)
Genome browser
AA seq
923 aa
AA seq
DB search
MVCNEERTPVASTGKKLVIVESPTKMRSIQGYLGDGYEVLSSVGHIRDLANKKDIPADKK
AAYGKYSIDIDNDFDPLYVVNDRKTKTVAELKRALKGADEVLLATDEDREGEAIAWHLLE
VLKPKVPVKRMVFHEITKDAIRAAVDNTRELDHALVDAQETRRVLDRLYGWDVSPVLWRK
VGSGREGAALSAGRVQSAATRMVVDRERERMAFVTASYWDVETGAVKGSLADGAQPFTAR
LARLDGAALARGTDFDDAGRLKKAVVVLDEVRARALAAALEAAGEASVSNLESKPGTRSP
KPPFTTSTLQQEAGRKLSMSAKHAMGVAQRLYEKGYITYMRTDSTALSAQAVTAARAQAV
SLYGDKAVPANPRAYRNNSKNAQEAHEAIRPSGEDFRTPSSVKDQLDRDELRMYDLIWKR
TIASQMSDAKYETTTVTITADVSVDGAVQRAEFTASGTVYTFKGFLEAYEEGTDEKRGDA
HRSDDQSLPVLSVGDLVRLRDIEAKGHATSPKPRYTEASLVKALEEKGIGRPSTFASIID
VILDRGYVRKRGQALVPSWLAFSVVRLLEQHFADLVDYDFTAALEDDLDRIARGEQRRTD
WLRAFYFGNEEHPGLRNIVENLGEIDARELNSTRITDTATLRFGKFGPYLEITDPEQPEA
EPRRVNIPDDLAPDELTPEKVQELRDAPVAGNRVLGTNPANGKLVVVKDGRFGPYIEETD
PEEPGEVDEATGEVIEEAPKKGRKDAAKTAPKPRTASLFASMSPDTIDLETALRLLDLPR
VVGEDPESGEPITAQNGRFGPYLKKGTDSRSLESEQQIFDVTLEQALALYAQPKYGARKA
SSALKEFDNDPVSGKPIKLRDGRFGPYVTDGETNATIPRGENAMDVTYERAVQLIADKRA
KGPAPKRTTRRTTTARKPAAKKK
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgcaacgaagaaaggacccccgtggcatccacaggcaaaaagctcgtcatcgtc
gagtccccgacgaagatgcgctccattcaggggtacctcggcgacggatacgaggtgctc
agctccgtcgggcacatccgcgacctggcgaacaagaaggacattccggccgacaagaag
gccgcgtacggcaagtactcgatcgacatcgacaacgacttcgatcctctctatgtcgtg
aacgaccgcaagaccaagaccgtcgccgaactcaagcgtgcgttgaagggggccgacgaa
gtcctcctcgccaccgatgaggaccgcgagggcgaggcgatcgcgtggcacctgctcgag
gtgctcaagcccaaggtgcccgtcaagcgcatggtcttccacgagatcacgaaggacgcc
atccgcgctgccgtcgacaacacccgcgaactcgaccacgccctcgtcgacgcccaggag
acccggcgcgtcctcgaccggctctacgggtgggatgtctcgcccgtcctctggcgcaag
gtcggaagcggtcgggaaggcgcagcgctcagtgccggtcgtgtgcagtccgcggcgact
cggatggtggtcgaccgcgaacgcgagcggatggccttcgtcaccgccagctactgggac
gtcgagaccggagcggtcaagggatcgctcgccgacggagcgcagcccttcaccgcgcgt
ctcgcgcgcctggacggcgccgccctcgcccgcggcaccgacttcgacgacgcgggtcgg
ttgaagaaggcggtcgtcgtcctcgacgaggtgcgggcgcgcgccctcgccgctgcgctg
gaggcagctggtgaagcatccgtctcgaatctcgaatccaagcccggcacccgcagcccc
aagccgcccttcaccacctcgaccctccagcaggaggcggggcggaagctctcgatgagc
gcgaagcacgccatgggcgtggcgcagcgcctttacgagaagggctacatcacctatatg
cgcaccgactccacggcgctgtcggcccaggcggtcacggcggctcgtgcgcaggcggtc
agcctgtacggcgacaaggcggtgcccgccaatccccgcgcgtatcgcaacaacagcaag
aacgcccaggaggcgcacgaggcgatccgtccctcgggcgaggacttccgcacgccctcg
tcggtcaaggatcagctcgatcgcgacgagctgcgcatgtacgacctcatctggaagcga
accatcgccagccagatgtccgacgccaagtacgagacgaccacggtgaccatcaccgcg
gatgtctcggtcgacggcgcggtccagcgcgcggagttcaccgcgtcgggcaccgtctac
accttcaaggggttcctcgaggcgtacgaggaggggaccgatgagaagcggggcgatgcc
caccgcagcgacgaccagtccctgcccgtgctgagcgtcggcgacctggtgcgcctgcgc
gacatcgaagccaagggccatgcgacgtcgccgaaaccgcgctacaccgaggcgagcctg
gtcaaggccctcgaggagaaggggatcggccgtccctcgacgttcgcgagcatcatcgac
gtgatcctcgaccgcggctacgtgcgcaagcgcggacaagcgctggtgcccagctggctc
gctttcagcgtcgtgcgactgctcgaacagcacttcgccgacctggtcgactacgacttc
acggctgcgctcgaggacgacctcgaccgcatcgcacgtggcgagcagcgtcgcaccgat
tggctccgtgccttctacttcggcaacgaggagcacccgggcctgcgcaacatcgtcgag
aacctcggcgagatcgacgcccgcgagctcaactccacccgcatcaccgacaccgccacc
ctgcgtttcggcaagttcgggccgtatctcgagatcaccgatcccgagcagcccgaggcc
gagccgcgccgggtgaacatccccgatgacctcgcgcccgacgagctcacccccgagaag
gtgcaggagcttcgcgacgcccccgtcgcgggcaaccgcgtgctcgggacgaacccggcg
aacgggaagctggtcgtcgtgaaggacggtcgcttcggtccctacatcgaggagaccgac
cccgaagagcccggcgaggtcgacgaggccaccggagaagtgatcgaggaggctccgaag
aagggcaggaaggatgccgccaagacggcgcccaagccccgcaccgcgtccctcttcgcg
tcgatgtcccccgacacgatcgacctcgagaccgcgctgcgcctgctcgaccttccccgc
gtggtcggcgaggatcccgagtcgggcgagccgatcaccgcccagaacggccggttcggc
ccgtacctgaagaagggcaccgactcacggtcactggagtcggagcagcagatcttcgac
gtcacactcgagcaggcactggcgctctacgcgcagccgaagtacggtgcacggaaggca
tcgagtgcgctgaaggagttcgacaacgatccggtgagcggcaagcccatcaagctgcgc
gacggccgcttcggaccgtacgtcaccgacggggagacgaacgcgaccatcccccggggt
gagaacgcgatggatgtcacctacgagcgcgccgtgcagctgatcgccgacaagcgggcg
aagggcccggcgcccaaacgcacgacgcgccgcaccaccaccgcccgcaagcccgcggcg
aagaagaagtga
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