Myroides albus: NWE55_00180
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Entry
NWE55_00180 CDS
T08487
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mals
Myroides albus
Pathway
mals03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mals00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NWE55_00180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mals03019
]
NWE55_00180
03009 Ribosome biogenesis [BR:
mals03009
]
NWE55_00180
Enzymes [BR:
mals01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NWE55_00180
Messenger RNA biogenesis [BR:
mals03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NWE55_00180
Ribosome biogenesis [BR:
mals03009
]
Prokaryotic type
rRNA helicases
NWE55_00180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
MatB
Motif
Other DBs
NCBI-ProteinID:
UVD79747
LinkDB
All DBs
Position
32601..34478
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AA seq
625 aa
AA seq
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MNNFEQLGLNESLLSAISDLGFENPSEIQVKAIPLLLEKNTDIVALAQTGTGKTAAFGFP
LIQKIDLSKKNTQALILSPTRELCLQIANEIKQYAKYVKGLHTVAIYGGASITEQAREIK
RGANIIVATPGRMQDMINRGMVNIKDIEYCVLDEADEMLNMGFYDDITAILADTPEEKNI
WLFSATMPAEVASIAREFMKTPEEITVGHKNQASTNVSHEFYLVGGRDRYLALKRLADAN
PDIFSVVFCRTKRDTQAIAEKLIEDGYNAAALHGDLSQAQRDAVMKSFRGKQIQMLVATD
VAARGIDVDDITHVINYQLPDEIETYTHRSGRTGRAGKSGTSMVIITKSELRKIGQIERI
IKTKFEEKPIPSGIEICEIQLYHLANRIKDVEVNQEIESFIPAITELLQDFDKEEIIKKV
VSVEFNRFLDYYQKPSNNLTSVSSSRGNSKEIPSDGAVRFFINLGAKDDLDWMTLKDYLK
ETLDLGRDDLFKVDVKEGFSFFNVEADHAEKVMSILNEESYKGRRVNVEISNNDGGRNNN
RRDHNRRGGRSNDRGGERSFRSGNSDRRGGERRSDDRRGGERRSDDRRGGERRSDRNSDN
NRAPRNERSSRRSSDAGSSRRTRRN
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatttcgaacaattaggattaaatgaatcccttctatcagcgattagtgattta
ggatttgaaaatccatcagaaatccaggtaaaggcgattcctttattattagaaaaaaat
accgatattgttgcgttagcccaaacgggaactgggaaaaccgcagcatttggttttcct
ttgatccagaagatagacttgtctaaaaaaaatacgcaagctcttatcttatcgccgact
agagagttatgtttgcaaatcgcaaacgaaattaaacagtacgctaagtacgtaaaaggc
ctacatactgttgctatttacggtggtgcaagcatcacagaacaagcaagagaaattaaa
cgcggtgcaaatatcattgttgctactcctggtagaatgcaggacatgatcaacagaggt
atggttaatatcaaagatattgagtactgtgttttagatgaggcggatgaaatgcttaat
atgggcttctatgacgatatcacagctattttagcggatactccagaagaaaaaaacatt
tggttgttttcagcaacaatgcctgcagaggtagcaagtattgcaagagagtttatgaaa
actccagaagaaattacagttggacacaaaaatcaagcttcgacaaatgttagtcacgaa
ttttaccttgttggaggtagagatcgttatttagcacttaaacgcttagctgatgctaac
cctgacattttctcagttgtattttgtagaacaaaaagagatacacaagcaattgctgaa
aagttaattgaagacgggtataatgctgctgctttacacggagatttatcacaagcgcaa
agagatgcagtaatgaaatctttccgcggtaaacaaattcaaatgttagtagctacagac
gttgctgctcgtggaattgacgttgacgacattacacacgtaattaactaccaattacca
gacgaaatcgaaacgtacactcaccgtagtggtcgtacaggacgtgcaggtaaatcaggt
acatctatggtaatcattaccaaaagtgaacttagaaaaatcggtcaaattgaaagaatt
atcaaaacaaaatttgaagagaaaccaatcccttcaggtattgagatttgcgaaattcaa
ttataccacttagcaaatagaatcaaagacgtagaggttaatcaagagattgaatcattc
attcctgcgattactgaattacttcaagattttgacaaagaggaaattatcaagaaagta
gtttctgtagaattcaacagattcttagattactaccaaaaaccttctaataatttaact
tctgtatcttcatctcgtggaaactcaaaagaaattccatcagacggtgcagttcgtttc
ttcatcaacttaggagctaaagacgatttagattggatgactcttaaggattacttaaaa
gagacattggatttaggtagagatgatttattcaaagttgacgtaaaagaaggtttctct
ttcttcaatgttgaagcagatcacgctgagaaagtaatgtctatcttaaacgaagaatct
tacaaaggtcgtagagtaaatgttgaaatctctaacaatgatggaggtagaaacaacaat
agacgtgaccacaacagaagaggtggacgtagcaacgacagaggtggagaaagatctttc
agaagtggaaattcagacagacgcggtggtgagagaagatctgacgacagacgcggtggt
gaaagaagatctgatgacagacgtggtggtgaaagaagatcagatagaaattctgacaac
aacagagctccacgtaacgaaagaagctcgagaagaagtagcgatgcaggatcttcaaga
agaacaagaagaaactaa
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