KEGG   Myroides albus: NWE55_05200
Entry
NWE55_05200       CDS       T08487                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
mals  Myroides albus
Pathway
mals03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mals00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NWE55_05200 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mals03021]
    NWE55_05200 (rpoC)
   03400 DNA repair and recombination proteins [BR:mals03400]
    NWE55_05200 (rpoC)
Enzymes [BR:mals01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     NWE55_05200 (rpoC)
Transcription machinery [BR:mals03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     NWE55_05200 (rpoC)
DNA repair and recombination proteins [BR:mals03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      NWE55_05200 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid
Other DBs
NCBI-ProteinID: UVD80653
LinkDB
Position
complement(1097432..1101703)
AA seq 1423 aa
MNKNKEKNTVKRFNKISIGLASPESILAESRGEVLKPETINYRTHKPERDGLFCERIFGP
VKDYECACGKYKRIRYKGIVCDRCGVEVTEKKVRRDRVGHINLVVPIAHIWYFRSLPNKI
GYILGLPSKKLDMIIYYERYVVIQAGIAKDAEGEPIKRLDFLTEEEYLNICDTLPMENQY
LDDNDPNKFIAKMGAECIMDLLATTDLDELSYTLRHAANNETSKQRKTEALKRLQVVESF
RESNLNRENRPEWMILKVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLM
EIKAPEVILRNEKRMLQEAVDSLFDNTRKSSAVKTESNRPLKSLSDSLKGKQGRFRQNLL
GKRVDYSARSVIVVGPELKLYECGLPKDMAAELYKPFVIRKLIERGIVKTVKSAKKIIDK
KEPVVWDILENVIKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCTAFNADFDG
DQMAVHLPLGPEAILESQLLMLASHNILNPANGAPITVPSQDMVLGLYYMTKLRKSTPEE
IVKGEGLTFYSVEEVHIAINEGKLDLNAGVKVRAKDYNAEGELVYQIIETTAGRILFNEV
VPEVAGYINEVLTKKSLRDIIGRILSITDVPTTAAFLDDIKNMGYGYAFRGGLSFSLGDI
MIPGRKQELIDDANQQVDHITMNYNMGLITNNERYNQVIDVWTSTNAMLTELAMKNIRED
KQGFNSVYMMLDSGARGSKEQIRQLTGMRGLMAKPKKSTAGGGEIIENPILSNFKEGLSI
LEYFISTHGARKGLADTALKTADAGYLTRRLHDVAQDVIVNSEDCGTLRGIEVKALKKNE
EVIESLGERVLGRVSLNDVVNPLNSEIIVHAGQEVSEAIAKAINAAPIESIEVRSPLTCE
AKAGICSQCYGRNLATAKMVQKGEAVGVVAAQSIGEPGTQLTLRTFHVGGTAGNISETSS
INSKFKGRLEMEDLKTVKGEDNEGKVIDIVISRSTEAKLFDVNTGILLTTNNIPYGSTIY
VEDGAIVEEGTTICKWDPYNGVIVSEFTGKIAYEDIEQGQTFMVEIDEQTGFQEKVITES
RNKKLIPTLLIYGKDGELIRSYNLPVGSHLMVNDGEKIKAGKVLVKIPRHTSKAGDITGG
LPRITELLEARNPSNPAVVSEIDGVVSFGKIKRGNREIIVESKTGDVRKYLVKLSNQILV
QENDFVKAGMPLSDGAITPEDILRIQGPSAVQQYLVNEIQEVYRLQGVKISDKHFEVVIR
QMMRKVQIQDPGDTLFLEDQLVHASDFIEENDRLFGMKVVEDAGESENLKEGQIVTMREL
RDENSLLRREDKNLVVARDVMPATGTPILQGITRASLQTKSFISAASFQETTKVLNEAAV
AGKVDTLTGLKENVIVGHRIPAGTGMRDYDNIVVSSLEEDGIL
NT seq 4272 nt   +upstreamnt  +downstreamnt
atgaataaaaataaagagaaaaataccgttaaaaggtttaataaaatctcaatcggttta
gcttcacctgaatcgattcttgctgaatcaagaggggaagttttaaaaccagaaactatt
aactatcgtactcataaacctgagagagatggtcttttctgtgaacgtattttcggacct
gtaaaagattatgagtgtgcttgtggtaagtataaaagaatccgttacaaagggatcgta
tgtgaccgttgtggggttgaagttactgagaaaaaagtacgtagagatcgcgtaggacac
attaacttggttgttccaatcgctcatatctggtacttccgttctcttccaaataagatt
ggttatatcttaggattaccatctaagaaattagatatgataatctattatgagcgttat
gttgttatccaagcgggtattgcaaaagacgctgaaggtgaacctatcaaacgtttagat
ttcttaactgaagaagagtatttgaatatctgtgatactcttccgatggaaaatcaatat
ttagatgacaatgatcctaataaattcatcgctaaaatgggtgctgaatgtattatggat
ttattggcaactactgacttagatgaattgtcatatacactgcgtcatgctgctaataat
gaaacatctaagcaaagaaaaactgaggcattaaaacgtttacaagttgtagagtctttc
cgtgaatcaaatttgaatcgcgagaacagacctgagtggatgatcttgaaagttattcca
gttattccacctgaattacgtccattagttccattagatggaggtcgttttgcaacttct
gatttgaatgacttatatcgtcgtgtaattattagaaacaaccgtttaaaacgattaatg
gagattaaagctcctgaagttattttgcgtaatgaaaaacgtatgcttcaagaagctgta
gattctctatttgacaacacaagaaaatcttctgctgttaaaactgaatctaatcgtcca
ttaaaatctttatctgattcgttgaaaggtaaacaaggtcgtttccgtcagaacttatta
ggtaaacgtgttgactattctgctcgttcagtaattgttgttggacctgagttaaagtta
tacgagtgtggattgccaaaagatatggctgctgaactttacaaaccttttgttattcgt
aagttaatagaaagaggtatcgtaaaaacagtaaaatctgcaaagaaaattatagataag
aaagagcctgttgtttgggatatcttagagaacgtgattaaaggacatccagttcttttg
aaccgtgctcctacgttacacagattgggtattcaagcttttcaacctaagttgattgaa
ggtaaagcaattcagttacacccattagtgtgtactgcatttaatgccgatttcgatggt
gaccagatggctgtgcatttaccattaggacctgaagctattttagagtctcaattgtta
atgttagcttctcacaatatcttgaatcctgcaaatggtgctcctattactgtaccttct
caagacatggtacttggtctatactatatgactaagttacgtaagtctacaccagaggaa
attgtaaaaggagaaggtcttactttctattctgtagaagaagtacacattgctattaat
gagggtaaattagatttgaatgcaggtgttaaagttagagctaaagactataacgctgaa
ggagagttagtttatcaaattattgaaactacagctggtagaatcttatttaacgaggtt
gtacctgaggtagcaggatatattaatgaagtattgactaagaaatctttaagagatatt
attggtcgtattttaagtatcactgatgtgcctactacggcagcattccttgatgatatt
aagaacatgggatacggttacgcattccgtggtggtttatcattcagtttaggtgatatt
atgattcctggacgtaaacaagaattaattgatgatgcgaaccaacaagtagatcatatt
acgatgaactataacatgggtcttatcacaaataatgagcgttacaatcaggtaattgac
gtttggacatctacaaacgcaatgttaactgagcttgcgatgaagaatatccgtgaggat
aaacaagggtttaactctgtgtacatgatgcttgattctggagcgcgtggttctaaagag
cagattcgtcagttaactggtatgcgtggtttgatggctaagcctaaaaaatctactgct
ggtggtggtgagattattgaaaacccaattctttctaactttaaagagggactttcgatt
ttagagtactttatttctacgcacggtgcacgtaaaggtcttgccgatacggcattaaaa
actgcggatgctggttacttaactcgtcgtttacacgatgttgcacaagatgtaattgta
aatagtgaagattgtggtactttaagaggaatcgaagttaaagctcttaaaaagaatgag
gaagttattgaatcattaggagaaagagtattaggtcgtgtttcattgaatgatgtagtg
aatccattaaactctgaaatcattgtacacgcaggtcaagaagttagtgaagcaattgct
aaagctattaatgctgcaccaattgagtcaatcgaggttcgctctccattaacttgtgag
gctaaagctggtatttgttctcagtgttatggacgtaacttagctactgctaagatggtt
caaaaaggtgaggcagttggagttgttgcagctcaatctattggtgagcctggtacacag
ttaacattaagaacgttccacgttgggggtactgcaggtaatatttcagaaacttcaagt
atcaactctaagtttaaaggtcgtcttgaaatggaagacttaaaaacagttaaaggagag
gataatgaagggaaagttattgatatcgttatttctcgttcgactgaggctaaattattt
gatgttaatacaggtattttattaactacgaataatattccttacggttctacaatctat
gttgaggatggagctattgttgaagagggaactactatctgtaaatgggacccttataat
ggtgtaattgtttctgagtttactggtaagattgcttacgaagatatcgagcaaggacaa
acgttcatggttgagatcgatgagcaaactggattccaagagaaagttattactgagtca
agaaataaaaagttaattcctactttattaatttatggtaaagatggtgagttaatacgt
tcttacaacttaccagtagggtcacacttaatggtaaatgatggtgagaaaattaaagct
ggtaaagttttagttaagattcctcgtcacacatctaaagctggggatattacaggaggt
cttccaagaattacagagttattagaagctcgtaatccttcaaaccctgctgttgtttct
gaaatagatggtgttgtatcttttggtaagattaagagaggtaaccgcgaaatcatcgtt
gagtctaaaacaggtgatgttagaaaatacttagttaagttatctaatcaaattcttgtt
caagaaaatgacttcgttaaagctggtatgccattatctgatggagctattactccggaa
gatatcttaagaattcaagggccttctgctgttcaacagtacttggttaatgaaattcaa
gaggtttaccgtttgcaaggtgtaaaaattagcgataaacacttcgaggttgttattcgt
caaatgatgcgtaaagtgcagattcaagatccaggggatactttattcttagaggatcaa
ttagtacacgcaagtgattttatcgaagagaacgatagattattcggaatgaaagtagtt
gaagatgctggtgaatctgaaaatctaaaagaaggacaaattgttacaatgagagagtta
cgtgatgaaaactctttattaagacgtgaagataagaacttagttgttgcgcgtgatgta
atgccagctacaggtactccaattcttcaaggtattactagagcttcattacagacaaaa
tcatttatctctgctgcttctttccaggaaacaacaaaagtattgaacgaagctgctgtt
gctggtaaggttgatacattaacaggattgaaagagaatgttattgttggacatagaatc
cctgctggtacaggtatgagagattacgacaatattgttgtaagttctttagaggaggat
ggtatcctttaa

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