Myroides albus: NWE55_05950
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Entry
NWE55_05950 CDS
T08487
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mals
Myroides albus
Pathway
mals03030
DNA replication
mals03430
Mismatch repair
mals03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mals00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NWE55_05950 (dnaE)
03430 Mismatch repair
NWE55_05950 (dnaE)
03440 Homologous recombination
NWE55_05950 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mals03032
]
NWE55_05950 (dnaE)
03400 DNA repair and recombination proteins [BR:
mals03400
]
NWE55_05950 (dnaE)
Enzymes [BR:
mals01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NWE55_05950 (dnaE)
DNA replication proteins [BR:
mals03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NWE55_05950 (dnaE)
DNA repair and recombination proteins [BR:
mals03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NWE55_05950 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
UVD80782
LinkDB
All DBs
Position
complement(1267609..1272138)
Genome browser
AA seq
1509 aa
AA seq
DB search
MYLIFDTETTGLPKSWSAPITDTDNWPRCVQIAWQLHDEMGNLIEHQDYLVRPEGFNIPY
DSERIHGISTELAEEQGISLAEVLAKFNIALSKTKFIVGQNLAFDLNIMGCEFYRMGVTS
IMSELPVLDTCTEVTAELLKIPGGRGGRYKLPTLTELHTYLFGVPFGEAHNATADVEATT
RCFLELLKKGVFSKEELQCDDTYIQRYIQANPEPFQPAGLKHINLKKASDEVRQRLSKLQ
GEPTEVISDEAKEKFKVAKFAHLHVHTQFSVLQSTISIPSLVKKAGEMELTAVAMTDHGN
MMGAFHFVMEVNNHNKKIEAQNKERAEKGETLVPLLTPIVGCEFFICEDHTDKSKKDNGF
QVVLLAKNKRGYHNLAKMASIAYTDGFYYVPRIDKEVVRKYKEDVIVLTGNLYGEVPGKI
LNIGEKQAEEALLWWKEEFGEDLYIELMRHGQEDENRVNQVLIDFSRKHDIKLIATNNSY
YLDKKDANAHDILLCVKDGEKQSTPIGRGRGYRYGLPNQEYYFKSSDEMKELFKDVPDAI
YNIQEVVDKVEPFVLHRDVLLPKFDIPEEFQDERDLEGDGSGKRGENNYLRYLTYEGAKR
RYKEITDEIRERLDFELATIERTGYPGYFLIVQDFIAAARDMGVSVGPGRGSAAGSAVAY
CLGITNLDPIEYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMEYVINKYGANQVAQIIT
YGKMATKSAIRDTARVLDLPLFEADRIAKLIPGMMPSKWNLNRFLTEDESAIKGVLRSEE
FDKVKELITLAQEDSLAAETIQQAKILEGSMRNTGIHACGVIITPDDITKFVPVTLAKDS
DLYVTQFDNSVAESAGLLKMDFLGLKTLTLIKDTVKLVKHRTGIDINPDEIPIDDVKTYE
LFQRGETVGVFQYESPGMQKYMRELKPTVFADLIAMNALYRPGPLEYIPSFISRKNGEEP
IVYDLDACEEYLKETYGITVYQEQVMLLSQKLAGFTKGEADVLRKAMGKKQKDVLDKMKP
KFVEQASAKGHDATILEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAA
VLSNNMNDIKSVTFFMEECKRMGLHVLGPDVNESYYKFTVNDEYAVRFGMGAIKGVGQGA
VNTIVENREKGNYKSIFDLAKRIDLRAANKKAFENLALAGGFDCFENTHRAQYFYMDAMD
NIPFLEKAIRYGAKSQENDNSSQFSLFGESAEVEIPEPVLPVCEEWTTMEKLAKEKEVVG
IYISGHPLDDFKFEMKYFCSSRVEEMRDLTELAGRTITFGGMISNVEFRTSAKGKDWAMF
TIEGYDEGCEFRLFNEDFLKFRHFLLQNTFVHVKAQVKEGWIRKDTGERGEPRLQFLEMK
LLYEVIPTSAKKLIILLNVKEIDEKLINNMKEVFSFNEGDKPVYFDLVELEKVFLDPVDQ
VKPIMPITFDEDMEFGDEEMAMEEVVVDEKREEIRIVNRVELSSRNMRVNITAELLEELE
RMQVNFKLN
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatttttgatactgaaacaacaggactcccaaagagttggtctgcccctatt
acagatacagacaactggccacgttgtgtacagattgcttggcaattacacgatgaaatg
ggaaatttaattgaacatcaggattaccttgttagacctgaaggatttaatattccttac
gattcagagcgcatccatggtatttctaccgaattagcagaggagcagggtatttctctt
gccgaagtgttagctaaatttaatattgcattatcaaaaacaaaatttattgtaggacag
aacttagcctttgaccttaatataatggggtgtgagttctatcgtatgggggtgacatct
attatgagtgagttgcctgtgcttgatacttgtaccgaagttacagctgagttacttaag
atacccggaggtagagggggtcgttataaattgcctactttaactgagctacatacttat
ttgtttggtgttccatttggagaagcacataatgcaactgctgatgttgaagcaactact
cgttgttttcttgagttattaaaaaaaggagtattctctaaggaggaactgcaatgtgat
gatacatatattcagcgctatatacaagcaaacccagagccatttcaaccagctggttta
aagcacatcaatcttaaaaaggcttctgatgaagttcgtcagaggttgtcaaagttgcaa
ggtgaacctactgaggttattagcgatgaagcaaaggagaagtttaaagtagcgaagttt
gctcatctccatgtacatacacaattttccgtcttgcaatctacgatttcaattccctct
cttgtaaaaaaagcaggtgaaatggaactgactgcggtggctatgacggatcacggaaat
atgatgggagcctttcattttgtaatggaggttaacaatcacaataagaaaatagaggca
cagaataaagagcgtgcggagaaaggagaaacattagtacctcttttaactccgattgta
ggatgtgagttttttatttgtgaagatcatacggataagtctaaaaaagacaatggtttt
caagtagtactgttagcaaagaataaaagaggatatcacaatttggctaagatggcttct
attgcctatacagatggtttctattatgtgccgcgtatagataaagaggttgttaggaaa
tataaggaagatgtgattgtcctaacaggtaacctctatggagaagtgccaggtaagatt
ctaaatattggtgaaaagcaggctgaagaggctttactttggtggaaggaagaatttggt
gaagacctctatattgagttaatgcgccatgggcaagaagatgaaaatagagttaatcaa
gtgcttattgacttttcaagaaaacacgatatcaaattaatagcaacgaataattcttat
tacttagataagaaggatgcgaatgcccacgatattttattgtgtgttaaagatggtgag
aaacaatctacacctataggtagaggaagaggctatcgctatgggttgccaaatcaagaa
tactatttcaagtcaagtgacgagatgaaggaactatttaaagatgttccggatgctatt
tataatattcaagaagttgtagataaagttgagccatttgttttacatagagatgtactt
cttccaaaatttgatattccggaagaatttcaagatgaaagagacttggagggtgatggg
agtgggaaaagaggtgaaaacaactatttgcgttatcttacttatgaaggtgcaaaacga
agatataaagaaattacagatgaaattcgcgagcgtttagactttgagttagctactatt
gaaagaacgggctatcctggttacttcttaattgtacaagactttattgctgcggcaaga
gatatgggagtttcggttgggccaggtcgtggttctgctgcaggttctgctgtagcttat
tgtttgggaattacgaatcttgatcctatcgagtatgatttgctttttgagcgtttcctt
aacccagatcgtgtatccatgcccgatatcgatattgattttgacgatgaaggtcgtggt
cgagtaatggaatatgtaatcaataagtatggagctaatcaagtggcgcagattatcact
tatggtaagatggcgactaagtctgcaattagagatacagcacgtgtattagacctgcca
ttgtttgaggcagatagaattgcgaagttgattcccggtatgatgccttctaagtggaac
ctaaatcgatttttaacagaggatgagagtgcaataaagggagtacttcgatcagaagaa
tttgataaagtaaaagagctcataacattagcacaagaagactcattagctgcagaaact
atacaacaagctaaaatattagagggttctatgcgaaatacaggaatccacgcttgtggt
gtaattattacaccagatgatattacaaagtttgttcctgttactttagctaaagattca
gatttatacgttactcagtttgataactcagttgcagagagtgcagggttattaaaaatg
gactttttagggttgaaaacattgactcttatcaaggacaccgttaagttggtaaaacat
agaacaggtatagatattaatcctgacgaaatccctattgacgatgtaaaaacttatgag
ttattccagcgtggggaaacggtaggtgtattccagtacgaatctcctggaatgcaaaag
tatatgcgtgaactgaagcctactgtatttgccgatttaattgcgatgaatgctttatat
cgaccaggaccattagagtatatcccttcgtttattagtcgtaagaatggtgaggaacca
attgtctacgatttagatgcttgtgaagaatacctaaaagaaacttatggtattaccgta
tatcaagagcaggtaatgcttctgtcacaaaagcttgctggatttacgaaaggtgaggcg
gacgtacttcgtaaagcaatgggtaagaagcaaaaggatgtcttggataagatgaaaccg
aagtttgtggaacaagcttcagcgaaagggcatgatgcaacaatattagaaaagatttgg
aaagactgggaggcatttgcttcgtacgcgtttaacaaatctcactctacttgttatgct
tggattgcctatcagactgcttatttaaaggctcattatcctgctgagtacatggctgct
gtactgtctaataatatgaatgatattaaatcggttactttctttatggaagagtgtaag
cgtatgggacttcatgtattaggacctgatgtgaatgaatcttattacaagtttacagta
aatgatgagtatgcagttcgctttgggatgggagcgataaaaggagtaggacaaggagct
gtgaataccattgttgagaatcgcgaaaaagggaattacaagtcaatatttgatttagcg
aagcgcattgatttgcgtgcagctaataagaaagcttttgaaaatcttgccttagctggt
ggttttgattgcttcgaaaatacacatcgcgcgcaatacttctatatggatgcgatggat
aatattccattcttagagaaggcaattcgctatggggctaaatctcaagagaatgataat
tcttcacaattcagtttatttggtgaaagtgctgaagtagaaataccagaacctgtctta
cctgtatgtgaggagtggacaacaatggagaaacttgcaaaggagaaggaagtagtaggt
atttatatatctggacatccacttgatgattttaagtttgagatgaagtatttttgctct
agcagagtggaagaaatgcgcgatcttacagaattagctggtcggacaataacctttggt
ggaatgattagtaatgttgaatttcgaacatctgctaaaggaaaggattgggcgatgttt
acgattgaaggatacgatgagggatgtgagtttagactttttaatgaagactttttaaag
tttagacatttcttattacagaatacctttgttcatgtaaaagctcaagttaaagaaggt
tggataagaaaggatacaggtgaaagaggagagccgagattgcagtttttggaaatgaaa
ttgctttatgaggttattccgacatcagcaaagaagttgataatattattgaacgtaaaa
gagattgacgagaagctaatcaataatatgaaagaggtgtttagttttaatgaaggggac
aaacctgtttactttgacttagtggagttagaaaaggttttcttagatcctgttgatcaa
gtaaaaccaattatgcccattacatttgatgaagatatggaatttggagatgaagaaatg
gccatggaagaagttgtagtagatgaaaagagagaagaaataagaattgtcaatagagta
gagctatccagtcgaaatatgcgtgtcaatattacagctgaactcttagaggaattggag
agaatgcaggttaattttaaattaaattag
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