Myroides albus: NWE55_09560
Help
Entry
NWE55_09560 CDS
T08487
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
mals
Myroides albus
Pathway
mals02020
Two-component system
mals02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mals00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NWE55_09560 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NWE55_09560 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mals03021
]
NWE55_09560 (rpoN)
Transcription machinery [BR:
mals03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NWE55_09560 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
MarR
Clp_N
GMP_synt_C
GCIP_C
Motif
Other DBs
NCBI-ProteinID:
UVD78381
LinkDB
All DBs
Position
complement(2087213..2088670)
Genome browser
AA seq
485 aa
AA seq
DB search
MLKQSLQLKLSQKLSPQQIQLMKLIQLPTLAFEQRLKEELIENPALESGKENESTHEEDN
YADEYDDFDNDRIETEDINIDEYLSDDETPEYKLQANNYSKDDEDYEAPIIAFDSFHQDL
LNQLNTFILTDENRAIAEFLVGSIDDMGYIRREIQDVVDDLAFTQGIYTDEATVEKILTI
VHELEPSGVGARNLQECLLLQLRHKTPTDAIELAKDIIENQFDSFTKKHYDKLLQKYGVT
KDQLRNAIDEIEKLNPKPGSAYVGNSRIVEHITPDFTIKIVDGELELSLNGRNAPELHVS
KDYQEMLQSYKESSKNNNAQKDAVQFIKQKLDGAKWFIDAIKQRQETLYVTMRAIVDYQE
EYFMTGDETKLKPMILKDIADVIGLDISTVSRVANSKYVDTPYGTHLIKNFFSEAMVNDQ
GEEVSTIEIKKILQNIINDEEKSKPYPDDKLAELLKEKGYPIARRTVAKYREQLDIPVAR
MRKRI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacaaagtcttcaattaaagttatcgcaaaaattatcacctcaacaaatacag
ttgatgaagctaattcaattgcctactttggccttcgaacaaaggttgaaagaagagtta
attgaaaatccagccctcgaaagtggtaaagaaaacgaatctacgcatgaagaagataac
tatgcggatgaatatgatgattttgacaatgacagaatagagactgaggatattaatatt
gacgagtatttaagtgatgatgagacacctgaatacaaattacaagctaacaactacagt
aaagatgatgaagactatgaagcacctatcattgcttttgacagttttcaccaagattta
ttaaaccaattgaacactttcatcttaacagatgaaaacagagctattgctgaatttctt
gtaggtagtatcgacgatatgggatatatacgcagagaaatacaggatgtagtcgatgac
ttagcttttactcaaggtatctatacagatgaagcaacagttgagaaaatcttaactatt
gtacatgaattagagccatctggtgtaggtgccagaaatttacaagaatgtctactgctt
cagctaagacataaaacacctacagatgcaatagaattagcaaaagacatcatagaaaat
caattcgactcttttactaaaaaacattacgataagctacttcaaaaatacggagtgacc
aaagatcaacttcgaaatgccatagacgaaattgaaaagttaaatccaaaaccaggaagt
gcctatgttggaaatagccgcatagtagagcacatcacccctgactttaccattaaaata
gtggatggagaattagaactatctctcaatggtcgtaatgcacctgaattacacgtttct
aaggattaccaagagatgttgcaatcttacaaagagtcttctaaaaacaacaacgctcaa
aaagatgcggttcagtttatcaaacaaaagttagatggagctaaatggtttattgatgct
attaaacagcgtcaagaaacactttatgtaaccatgcgcgctattgtggactaccaggaa
gaatattttatgactggtgatgagactaagttaaaaccaatgatccttaaagatattgct
gatgtaattggcttagacatatctactgtatcaagagtggcaaatagcaaatatgtggat
acgccttacggtacgcatttaatcaaaaactttttttcggaagctatggttaatgatcaa
ggagaagaagtatctactattgaaatcaaaaaaatactccaaaacatcattaatgatgag
gaaaagagcaaaccttatcctgatgataaattagctgaattattaaaagaaaagggctat
cctattgcaaggagaacagttgctaaatatagagagcaattagatattcctgtggcgaga
atgcgcaaacgcatttaa
DBGET
integrated database retrieval system
