Myroides albus: NWE55_10645
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Entry
NWE55_10645 CDS
T08487
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mals
Myroides albus
Pathway
mals03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mals00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NWE55_10645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mals03019
]
NWE55_10645
Enzymes [BR:
mals01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NWE55_10645
Messenger RNA biogenesis [BR:
mals03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NWE55_10645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Fe-ADH
CMS1
P-loop_SecA
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UVD78581
LinkDB
All DBs
Position
complement(2338701..2339960)
Genome browser
AA seq
419 aa
AA seq
DB search
MTFEDLHLNKNILRAIEELGYQAPTPIQEKVIPLVLAEKDLIGCAQTGTGKTAAFAMPII
HYLHKIGNTKKAKKAKVLIITPTRELAGQIADNFTAYAKYTNVTHITIYGGMSIKPQIEQ
LKKGADVIIGTPGRLLDLYKQKQLDLDSLHYLVIDEADLMLDMGFIDDVKKLIQLTPSNR
QTLLFSATMPLPVRELAHEFLQKPEYVAVDAISSSAKTVKQHVYFVEKSDKKKLLYHIIR
NQKLTDVLVFTRTKTGADSVVESLKKNGINAESFHGDKSQTARQEALDSFKNKETKVLVA
TDIAARGIDIDNLPCVINFDLPNIPETFVHRIGRTGRAGNEGIAISFCDKSEKTYWDTIV
KFTRTQPKVVSEHPYPWKEDVKTGQKKTGETSDQPKKDYRNKNKSRKSEASKKKKKRWY
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaagatttacatttaaataaaaatattctaagagctattgaagaattaggt
tatcaagcacctactcccattcaagaaaaagtaattccactggtacttgctgaaaaagac
ttaattggttgtgcgcagactggtacaggaaaaacagctgcatttgccatgcctattata
cattatctacacaaaataggtaatacgaaaaaagctaagaaagcaaaagttttaatcatt
actcctacaagagagttagctggtcaaatagcggataattttactgcttatgctaaatat
actaatgtaactcatatcactatttacggtggaatgtctattaaaccacagatagaacaa
ttaaagaaaggagctgatgtgattattggtactcccggacgactgttagatttatataaa
caaaaacagttagacctggattcacttcactatcttgtaattgatgaggcggatttaatg
ttagatatgggattcattgacgatgtcaaaaaactaattcaattaaccccaagcaataga
caaacactgttattctcggcaacaatgcctttgcctgttcgcgagttggctcatgagttc
ttacagaaaccagagtatgtagccgtagacgccatatcttcaagtgcaaaaacagttaaa
caacatgtttacttcgtcgaaaagtctgacaaaaagaaattgttgtatcacatcattaga
aaccaaaaactaactgatgtacttgtatttactcgaaccaaaaccggtgccgattctgtg
gttgaatctctaaagaaaaatggcattaacgctgaatccttccatggagacaaatcccaa
actgcaagacaagaagcattagacagtttcaaaaacaaagaaacaaaagtattagtagct
acagatatagcagcgagaggaatagatatcgataacctaccttgcgtaatcaattttgac
ttacccaatataccagaaacttttgtacatcgtattggccgtactggaagggcagggaac
gaaggtattgcaatatctttctgtgataagtcagaaaaaacatattgggatacaatagtg
aaatttactcgaacacagcctaaagtggttagcgagcatccatatccttggaaagaggat
gtgaaaacgggacaaaaaaagacgggagaaacttctgatcaaccaaagaaagattataga
aataaaaataaatcacgtaaatctgaagcttctaaaaagaagaagaaaagatggtattaa
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