Myroides albus: NWE55_10725
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Entry
NWE55_10725 CDS
T08487
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mals
Myroides albus
Brite
KEGG Orthology (KO) [BR:
mals00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mals03016
]
NWE55_10725
Enzymes [BR:
mals01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
NWE55_10725
Transfer RNA biogenesis [BR:
mals03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
NWE55_10725
Prokaryotic type
tRNA splicing ligases
NWE55_10725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
UVD78597
LinkDB
All DBs
Position
complement(2356188..2357579)
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AA seq
463 aa
AA seq
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MGRKLSGRDFIKIGFPQNNTINIALGQVNRYKKKENKNSILEEAKLVLQNPESFIGDGIW
GKVAESMIKQVEVKKHQLNTNRVPFSIYGEDAIDEQTKYQLFTALKLPVAVQGALMPDAH
YGYGLPIGGVLATDNAVIPYGVGVDIGCRMSMSVFNLPANFLKGKDHQLLNILSEHTKFG
MYETHKIKADHEVFSRDEFKNIPFVKGLLDKAYKQLGTSGGGNHFVEFGIVRLTETKPEW
KLEPGEYIAVLSHSGSRGLGANIAKHYTYLATKQCPLPSNAQHLAWLDLNTHDGQEYWLA
MNLAGDYAKACHDDIHRRIAKALGKQIAFTIENHHNFAWKEVINNKELIVHRKGATPAAE
GQLGIIPGSMTTNGYIVEGLGNAESLNSASHGAGRLHSRAACKQKFTKSEIKKELSSTGV
QLIGGSVDEAPMAYKNINAVMQAQSELVKVLGSFTPKFVRMDK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggaaactttctgggagagactttattaaaatagggtttcctcaaaataatacc
ataaacatcgccttagggcaagtaaatagatataagaaaaaagagaataaaaacagcata
cttgaagaagctaaacttgtactacagaatcctgaatcttttataggagatggtatctgg
ggaaaagtagcagagagtatgatcaaacaagtagaagtcaaaaaacatcaactcaatacc
aatagagttccgttctctatttatggggaagatgctattgacgaacagacgaagtatcaa
ctgttcactgctttaaaactacctgtagcagtacagggggcactaatgcctgacgcacac
tatggatatggtttacctataggcggggtattagctactgataacgcagttatcccttat
ggagttggagtagatataggctgtcgcatgagtatgtcagtctttaatttacctgctaat
ttcctaaaaggtaaagaccatcagttactaaacattttgtcagaacacactaaattcggt
atgtacgagacacataaaataaaagctgatcacgaggtattcagtagagatgaatttaag
aatatcccctttgtcaaaggtttattagacaaagcttataaacaattgggaacatcaggt
ggtggtaatcactttgtagagtttggcatcgtcagattgacagagactaaacctgagtgg
aaactcgagcctggagaatatattgcagttctttcacatagcggatcaagaggattaggg
gcaaacatcgctaaacattatacatacttagcgactaaacaatgtcccctaccaagcaat
gctcagcatttagcttggttagacctcaacacacatgatggacaagagtattggttagcc
atgaatcttgcaggagattacgcaaaagcttgccacgatgatatacaccgtcgcattgct
aaagcattaggtaagcagatagctttcaccatagaaaaccatcataacttcgcttggaaa
gaagtcattaacaacaaagaattaattgttcaccgcaaaggggctactcctgctgcagaa
ggacaattgggaataataccgggatctatgactactaatggctatatagtcgaaggtctg
ggaaatgcagagagcttaaattctgcctctcatggagcaggacgcctacactcacgcgcg
gcatgtaaacagaagtttaccaagagtgagattaaaaaagaacttagttctactggcgta
cagcttataggaggtagtgtagatgaagccccaatggcttataaaaacatcaatgcagta
atgcaagctcaaagcgaattagtaaaagtattgggaagctttaccccaaaatttgtaaga
atggataagtaa
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