Mameliella alba: KU6B_30750
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Entry
KU6B_30750 CDS
T06509
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
malu
Mameliella alba
Pathway
malu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
malu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KU6B_30750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malu03019
]
KU6B_30750
03009 Ribosome biogenesis [BR:
malu03009
]
KU6B_30750
Enzymes [BR:
malu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
KU6B_30750
Messenger RNA biogenesis [BR:
malu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KU6B_30750
Ribosome biogenesis [BR:
malu03009
]
Prokaryotic type
rRNA processing factors
KU6B_30750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
BBU56810
LinkDB
All DBs
Position
complement(3036773..3040099)
Genome browser
AA seq
1108 aa
AA seq
DB search
MGVQTDNMAKKMLIDATHAEETRVVVVDGNKVEEFDFESENKRQLAGNIYLAKVTRVEPS
LQAAFVDYGGNRHGFLAFSEIHPDYYQIPIADRQALMEEEEEAARAAAEEEEKPKKSRSR
SRKRSTKASDKTDKAEKSDKQAETAKETKPREPSGMETIDLDDDLETGEPGEGLSPMETV
HETPVEEPEAADPAPQETPVETDPAPEPAPVETPVQPEPQADPAPAEVPAPAEAPEVPGS
ETAADPAPATEALTPLDTEAAAEPAPTPEDEDTAEAAEPEDAPESETPPRPIAEGTKDEA
AVVSQEPDTGDDTVTPEETAAEAPVEAPDAAEPVAEVVAEADPAPVAEDSAEDDLAPEAS
DDDDEDDEDDKDDAAARDASIESVADDDTEEDIRPVRKPRPRRYKIQEVIKVRQIMLVQV
VKEERGNKGAALTTYLSLAGRYCVLMPNTARGGGISRKITNATDRSKLKEIAQSIDVPKG
AGLIIRTAGAKRTKTEIKRDYEYLQRLWEQIRELTLKSIAPAKIYEEGDLIKRSIRDLYS
REIDEVLVEGERGYRVAKDFMKMIMPSHAKNVKHYNEQMPLFARYQVESYLGGMFNPTVQ
LKSGGYIVIGVTEALVAIDVNSGRATKEGSIEETATKTNLEAAEEVARQLRLRDLAGLIV
IDFIDMDERKNNAAVEKKLKDKLKTDRARIQVGRISGFGLLEMSRQRLRPGMIEATTQPC
AACHGTGLIRSDDNMALQILRQIEEEGVRRRSREVLVKCPIGIANYLMNQKREHVAMIEA
RYGMSVRIEGDPHLVAPDFSMEKFKTATRVVPEATAPVVSVDTSLMDQVDEDTEAEQEEE
EEAPQAEKPETTSDDNGDEGKPKKRRRRRRRKSKSKDNGEGSETGAEGSTDKDDSAKEAE
KPVEAVEAADEAKTSEAAEADAPKADEGEDTAKPKRTRTRSRRTRSKPADAQTETDEGEV
AVAETAEAKPEATPEPTPKATEAPAAEVAEPVAEAAPVAETAEAPEPEVSEAPAEAAAET
TEDKPKRARTRRKASDVIAAVVGTPVAETAVEPASAPEETTEDASEEAQTEAAAAPAEPV
AEEAPEPVTETAEAEDKPKRRGWWSLGR
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
ttgggtgtgcaaacggataacatggcaaagaaaatgctcatcgacgccacccacgcggaa
gagacccgcgtcgtggtggtggacggaaacaaggtcgaggaattcgacttcgagtccgag
aacaagcggcagctcgccggcaacatctatctagccaaggtcacacgggtcgaaccctcg
ctgcaggcggcgttcgtcgattacggcggcaaccgtcacggcttcctggccttctcggaa
atccaccccgactactaccagatccccatcgccgaccgtcaggcgctgatggaggaagag
gaagaggccgcgcgcgccgctgccgaggaagaggaaaagcccaagaagtcccgctcgcgc
tcgcgcaagcggtcgacgaaggcatccgacaagacggacaaggcggagaagtccgacaag
caggccgagaccgccaaggaaaccaagccgcgcgaacccagcggcatggaaaccatcgac
ctcgacgacgacctggaaaccggcgagcctggcgagggcctgtcgccgatggaaaccgtg
cacgagaccccggttgaagagccggaggccgctgatcccgcccctcaggaaaccccggtc
gaaaccgatccggcgccggaacccgcgcccgtcgaaacgcctgtgcagcctgagccccag
gccgacccggccccggccgaagtgcccgctcccgccgaggcgcccgaggtgcccggttcc
gaaaccgcggcggaccccgccccggcgaccgaggccttgacgcctctggacaccgaggcc
gccgccgaaccggcgccgaccccggaagacgaggacaccgccgaagcggcagagcccgag
gacgcacccgagagcgaaacgccgccgcgccccatcgcagaaggcaccaaggacgaggcc
gccgtcgtctcgcaagagccggacaccggcgatgataccgtgacgcctgaagaaactgcg
gcagaagccccggtcgaggcgcccgacgcggcagagccggtggccgaggttgtcgcagag
gccgatcctgcccccgtggcggaggacagtgccgaggacgacctcgcgcccgaggcgtcg
gacgatgacgacgaagacgacgaagacgacaaggacgatgccgcggcgcgcgatgcctcg
atcgagtccgtggccgacgacgacaccgaagaggacatccgcccggtccgcaagccgcgc
ccgcgccggtacaagatccaggaggtcatcaaggtccgccagatcatgctggtgcaggtc
gtcaaggaagagcgtggcaacaagggcgctgcgctgaccacctacctgtcgctggcgggc
cgctattgcgtgctcatgcccaacaccgcacgtggcggtggcatcagccgcaagatcacc
aatgcgaccgaccgttccaagctcaaggaaatcgcgcagtcgatcgacgtgcccaagggc
gcgggcctgatcatccggacggcaggcgccaagcgcaccaagaccgagatcaagcgcgac
tacgagtacctgcagcgtttgtgggagcagatccgcgaactgacgctgaagagcatcgcg
ccggccaagatctacgaggaaggcgacctgatcaaacggtcgatccgcgatctctattcg
cgcgaaatcgatgaagtccttgtggaaggcgaacggggataccgggtcgcgaaggacttc
atgaagatgatcatgccgtcccacgccaagaacgtgaaacactacaacgaacagatgccg
ctttttgcgcgctaccaggtggaaagctacctgggcgggatgttcaacccgaccgtgcag
ctgaaatccggtggttacatcgtgatcggcgtgaccgaggcgctggtggccatcgacgtg
aactcgggccgcgccaccaaggaaggctcgatcgaggagaccgcgaccaagaccaacctg
gaggctgccgaggaggtggcgcgccagttgcgtctgcgtgacctcgcgggtctgatcgtc
atcgacttcatcgacatggacgagcgcaagaacaacgccgccgtcgagaagaaactgaag
gacaagctcaagaccgaccgcgcccgcatccaggtgggccgcatctcgggctttggcctg
ttggaaatgtcgcgccagcgtctgcgcccaggcatgatcgaggcgacgacgcagccctgc
gccgcctgccacggcaccggccttatccgctcggacgacaacatggcgctgcagatcctg
cgccagatcgaggaagaaggcgtgcgccgccgttcgcgcgaggtgctggtgaaatgcccc
atcggcatcgccaactacctgatgaaccagaagcgcgaacatgtcgccatgatcgaggcg
cgctacggcatgtccgtgcgcatcgagggtgacccgcatctggtggcgcccgacttctcg
atggagaagttcaagaccgcgacccgcgtcgtgcccgaggccaccgcacccgttgtgtct
gtcgacacgtcgttgatggatcaggtcgacgaggacaccgaggccgagcaggaagaagag
gaagaggcgccccaggccgaaaagccggagaccacctctgacgacaatggtgacgagggc
aagcccaagaagcgccgtcgtcgtcgccgtcgcaagtcgaagtccaaggacaacggtgag
ggatccgagaccggcgcagagggcagcaccgacaaggacgactcggccaaggaggccgag
aagccggtcgaggctgtcgaggctgcggatgaagccaagacctccgaggccgctgaggcg
gatgcgcccaaggcagacgagggtgaagatacggccaagcccaagcggactcgcacccgg
tcgcgccgcacgcgcagcaaacccgccgatgcccagacagagacggacgagggggaggtg
gcagtagccgagaccgccgaggccaagcccgaagccacaccggagccgacaccgaaagcc
accgaggcgcccgccgccgaagtggcggagccagtcgccgaagccgcgcctgtcgcagag
acagcggaagcgcccgaacccgaggtgagcgaagccccggccgaggccgcagcggaaacg
accgaggacaagcccaagcgcgcgcgcacgcgtcgcaaggcctctgacgtgattgctgcc
gtggttggcaccccggtcgcggaaaccgccgtggaaccggcctcggcacccgaggaaacg
accgaagacgcatcggaagaggctcagacagaggccgccgcagcgcctgcggaacctgtg
gccgaagaggcgccggaaccggtgacggaaaccgccgaggctgaggacaagcccaagcgg
cgcggttggtggtccctgggccgctga
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