Mameliella alba: KU6B_42510
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Entry
KU6B_42510 CDS
T06509
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
malu
Mameliella alba
Pathway
malu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
malu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KU6B_42510 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malu03019
]
KU6B_42510 (pnp)
03016 Transfer RNA biogenesis [BR:
malu03016
]
KU6B_42510 (pnp)
Enzymes [BR:
malu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KU6B_42510 (pnp)
Messenger RNA biogenesis [BR:
malu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KU6B_42510 (pnp)
Transfer RNA biogenesis [BR:
malu03016
]
Prokaryotic type
tRNA degradation factors
KU6B_42510 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
BBU57986
LinkDB
All DBs
Position
complement(4166040..4168178)
Genome browser
AA seq
712 aa
AA seq
DB search
MFKEVKKSMQWGEETLTLETGKVARQADGSVIATLGETSVMANVTFAKQQKEGQDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDIVAMIAASAALTISGAPFMGPIAGARVGFEDGEYVLNPTVEDMDQLRNNPEQR
LDLVVAGTKDAVMMVESEAYELTEDEMLGAVLFAHEQIQPVIDLIISLAEDAAKEPFDFQ
PPDYSALFDVIKAAGEDKMRAAYAISDKQERVTTVAAVKEEIKAGLSEEQLEDPNLGSAI
KKLESMVLRGDVVKNGRRIDGRALDQVRPIVCETGLLPRTHGSALFTRGETQGLVVTTLG
TGDDEQIIDALHGNYRSNFLLHYNFPPYSVGEVGRVGSPGRREIGHGKLAWRALQAVLPA
ATDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLVLEEDGSYG
ILTDILGDEDHLGDMDFKVAGTENGITSLQMDIKVAGITPEIMKAALAQAKDGRLHILGE
MAKALSSAGEFSVHAPRIETMQIPTDKIREVIGSGGKVIREIVEVSGAKVDINDEGIIKI
ASPDGESIQKAYDMIYSIVAEPEEGKVYKGKVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVYVKLLGFDDRGKVRLAMKMVDQETGEEITKQKEEAEE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagaagtcaaaaagtcgatgcagtggggcgaggaaacgctcacactggaaacc
ggcaaggttgcccgtcaggccgacggcagcgtcatcgccaccctgggcgagaccagcgtc
atggccaacgtgacctttgccaagcagcagaaggaaggccaggacttctttccgctgacc
gtccattaccaggaaaaatattacgcggccggcaaggtgcccggtggcttcttcaagcgt
gaagcacggccgaccgagaaggaaacgctgaccgcgcgcctgatcgaccgtccgatccgc
ccgctgttcgtccccggcttcaagaacgaagtgctggtgatgtgtaccgtcctgtcgcac
gacctggtcaatgacccggacatcgtggcgatgatcgccgcaagcgccgcgctgaccatt
tccggcgcgcccttcatgggcccgatcgccggtgcgcgcgtcggctttgaagatggtgaa
tacgtcctgaacccgaccgtcgaggacatggaccagctgcgcaacaaccccgagcagcgg
ctcgacctggttgtcgcgggcaccaaggacgcggtcatgatggtcgagtccgaagcctac
gaactgaccgaagacgagatgctgggcgcggttcttttcgcgcatgagcagatccagccg
gtcatcgacctgatcatctcgctggccgaagacgcggccaaggagcccttcgacttccag
ccgccggattactcggccctgttcgacgtgatcaaggccgcgggcgaagacaagatgcgc
gccgcctacgcgatttcggacaagcaggagcgcgtgaccacggttgccgccgtcaaggaa
gagatcaaggccggcctcagcgaggaacagcttgaagatccgaacctgggttccgcgatc
aagaagctggaatcgatggtgctgcgcggtgacgtggtcaagaacggccgccgcatcgac
ggccgcgcccttgaccaggtgcgcccgatcgtctgcgaaaccggcctgctgccgcggacg
cacgggtcggcgctgttcacccgtggcgaaacccagggcctggtcgtgaccacgctgggc
accggcgacgatgagcagatcatcgacgcactgcacggcaactaccgttcgaacttcctg
ctgcactacaacttcccgccctattcggtgggcgaggttggccgcgttggctcgcccggt
cgtcgtgagatcggccacggcaaactggcatggcgcgcgctgcaggcggtgctgccggcg
gcaaccgatttcccctacacgatccgcgtcgtgtccgagatcaccgaatccaacggctcg
tcctcgatggcctccgtctgcggcggctcgctgtcgatgatggatgcgggcgttccgctg
aaggcgccggttgccggtgtggcgatgggcctggtgctggaagaggacggttcctacggg
atcctgaccgacatcctgggcgacgaggatcacctcggtgacatggatttcaaggttgcg
ggcaccgagaacggcatcacctcgctgcagatggacatcaaggtcgctggcatcacgccc
gagatcatgaaggcggcgctggcacaggccaaggacggtcgcctgcacatcctgggcgag
atggccaaggccctgtcctcggccggtgagttcagcgttcacgcgccgcgcatcgagacc
atgcagatcccgaccgacaagatccgtgaagtgatcggctcgggcggcaaggtgatccgc
gagatcgtcgaagtgtcgggcgccaaggtggacatcaacgacgaaggcatcatcaagatc
gcctcgccggacggtgagtccatccagaaggcctatgacatgatctattcgatcgtggca
gagccggaagagggcaaggtctacaagggcaaggtcgtgaagatcgtcgatttcggcgcc
ttcgtgaacttctttggcaagcgtgacgggctggtgcacgtctcccagatcgagaaccgc
cgcctgaaccatccctcggacgttctgaaggaaggccaggaagtctacgtcaagctgctg
ggctttgacgatcgcggcaaggtgcgcctggcgatgaagatggtcgaccaggagaccggt
gaagagatcaccaagcaaaaggaagaagcggaggagtga
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