KEGG   Mycolicibacterium alvei: MALV_12270
Entry
MALV_12270        CDS       T06961                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
malv  Mycolicibacterium alvei
Brite
KEGG Orthology (KO) [BR:malv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:malv03016]
    MALV_12270
Enzymes [BR:malv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     MALV_12270
Transfer RNA biogenesis [BR:malv03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    MALV_12270
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: BBX26102
UniProt: A0A6N4URN7
LinkDB
Position
1270614..1271879
AA seq 421 aa
MMDEDPQVSADLDAAEPDEAESTPLLSPADGVPEVCVTAGEISSAATSLAKGSGPFAIDA
ERASGFRYSNRAYLVQIRRSGSGTALIDPVNHGGSPIDAMAPVADALAADEWVLHAADQD
LPCLSEIGLRPGKLYDTELAGRLAGFERVNLAAMVQRLLGLQLMKGHGAADWSKRPLPAD
WLNYAALDVEVLVELRNAIAAVLDDQGKTDWAAQEFEHLRTYVAQPTRRDRWRRTSGIHK
VRNPQALSAVRELWTTRDTIARGRDIAPGRILPDAAIINAATTDPKTLDELIALPVFGGS
KQRKSAKVWLDALARARDNTDPPEANEAQSGPPPAARWARRKPEAAARLEAAKASLAELS
QRVSVPAENLITPEVVRRLCWGWHPVGDTATAVEEFLVDAKVRPWQRELTVPVLTAALET
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgatggacgaagaccctcaagtttcagcagacctagacgctgccgagcccgacgaagcc
gaatcgactccgctgctctcccccgccgacggagtacccgaggtatgcgtcacagccggt
gaaatatcatctgccgcaacatctctggcgaaaggcagcggtccgttcgcgatcgatgcg
gaacgcgcgtcgggattccgctactccaaccgggcgtacctggtacagatccgacgctcc
ggttccggcaccgcactgatcgacccggtcaaccacggcggctcccccatcgacgcgatg
gctccggtcgccgacgcgctggccgccgacgaatgggtgctgcacgccgccgatcaggac
ctgccgtgcctgtccgagatcggcctgcgccccggcaagctgtacgacaccgagttggcc
ggtcgactggccggtttcgagcgggtcaacctcgccgcgatggtgcagcggttgctcggc
ctgcagctgatgaagggccacggcgccgccgactggtccaagcgcccgctgccggccgat
tggctgaactacgccgcactggacgtcgaggtactcgtcgaattgcgcaacgcgatcgcc
gctgtactcgacgatcagggcaaaaccgattgggcggcacaggaattcgagcacctgcgc
acctatgtcgcacaacccacccggcgcgaccgctggcggcgcacctccggcatccacaaa
gtgcgcaaccctcaggcactttcggccgtgcgcgagttgtggaccacccgcgacaccatc
gcccgtggccgcgacatcgcaccgggacggatcctgcccgacgccgccatcatcaacgcc
gccacaaccgaccccaagacgctcgacgaactgatcgcactaccggtcttcggtggctcc
aagcagcgcaagagcgcgaaggtctggctggacgccctggcccgggccagggacaacacc
gacccgcccgaggccaacgaggcccagagcggcccgcccccggcggcgcggtgggccaga
cgcaaaccggaggccgcagcccgcctcgaagccgccaaggccagtctggccgaactgtcc
cagcgggtctcggtgcccgccgagaacctcatcaccccggaagtggtgcgccgactgtgc
tggggttggcatccggtcggcgatacggccaccgcggtggaggaatttctcgtcgacgcc
aaggtccggccgtggcagcgggaactgacggtcccggtgctgaccgctgcactcgaaacc
gactga

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