Mycolicibacterium alvei: MALV_15400
Help
Entry
MALV_15400 CDS
T06961
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
malv
Mycolicibacterium alvei
Pathway
malv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
malv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MALV_15400 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
malv03400
]
MALV_15400 (fpg)
Enzymes [BR:
malv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MALV_15400 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MALV_15400 (fpg)
DNA repair and recombination proteins [BR:
malv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MALV_15400 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Auto_anti-p27
TackOD1
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
BBX26415
UniProt:
A0A6N4UR68
LinkDB
All DBs
Position
complement(1573086..1573871)
Genome browser
AA seq
261 aa
AA seq
DB search
MHHPRSVRRHEAGPADLTARLLGARITGTGRRGKYLWLTLADDDGQDETEALVVHLGMSG
QMLLGPIRDDRHLRIAAVLDDGTALSFVDQRTFGGWQLAELVTVDGTAVPQPVAHVARDP
LDPRFDRDRVVEVLRRKHSEIKRQLLDQTVVSGIGNIYADEALWRTKVNGARTAAQLPRR
RLGEVLDAAAAVMTDALSQGGTSFDSLYVNVNGESGYFERSLDAYGREGEPCRRCGAVMR
RDKFMNRSSFYCPRCQPRPRG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgcatcatccgcgttccgtacgccgtcacgaggccggtcctgctgacctgaccgcccgc
ctgttgggggcccggatcaccggaaccggacgtcgcggcaagtacctctggttgacgctg
gccgacgacgacggccaggacgagaccgaagccttggtggtgcatctgggcatgagcggc
cagatgttgctcgggccgatccgtgacgaccggcatctgcggatcgccgccgtgctcgat
gacggcacggccttgagtttcgtcgaccaacgtaccttcggcggctggcagctggccgaa
ttggtgacggtcgacggtaccgccgtgccccaaccggtcgcgcacgtggcacgcgatccg
ctcgacccccgcttcgatcgcgaccgtgtggttgaggtgttgcggcgcaaacactctgag
atcaaacgccagctgctcgaccagaccgtggtgtcgggtatcggcaacatctacgccgac
gaggcactgtggcggaccaaggtcaacggagccaggaccgccgcgcagctgccgcgccgc
cgattgggcgaggtgctcgacgccgccgctgcggtgatgaccgatgcgctgagccagggc
ggcacgtcgttcgactcgctgtatgtgaacgtcaacggcgaatccggttacttcgaacgg
tctttggatgcctacggccgcgaaggggagccgtgccggcggtgcggcgcggtgatgcgc
cgcgacaagttcatgaaccggtcatcgttctactgcccgagatgtcagccccgtccccgg
ggctga
DBGET
integrated database retrieval system
