KEGG   Mycolicibacterium alvei: MALV_20260
Entry
MALV_20260        CDS       T06961                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
malv  Mycolicibacterium alvei
Brite
KEGG Orthology (KO) [BR:malv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:malv03400]
    MALV_20260
Enzymes [BR:malv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MALV_20260
    5.6.2.6  RNA 3'-5' helicase
     MALV_20260
DNA repair and recombination proteins [BR:malv03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MALV_20260
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr WH4_Lhr DEAD WH2_Lhr Helicase_C ResIII AlkZ-like DUF6406 PhoH AAA_25 GST_C_2
Other DBs
NCBI-ProteinID: BBX26901
UniProt: A0A6N4UTQ7
LinkDB
Position
2079008..2083552
AA seq 1514 aa
MTTTPAGPLARFSALTREWFTAAFPAPTAAQAQAWSAIAEGLNTLVIAPTGSGKTLAAFL
WAIDELAQLPPGPRTGTTVLYVSPLKALAVDVERNLRTPLTGVTRVAERHGVPAPSISVG
VRSGDTPPGERRAMLSKPPDILITTPESLFLMLTSAARETLASVRTVIVDEVHAVAATKR
GAHLALSLERLDQLLDKPAQRIGLSATVRPPEEVARFLSGQAPTTIVAPPSGKTFDLSVQ
VPIPDMANLDNNSIWPAVEERIVDLIEAHRSSIVFANSRRLAERLTSRLNEIHAERAGIE
LSLDHNPQVGGGAPAQLMASGQASGAPPLLARAHHGSVSKEQRALVEDDLKSGRLRAVVA
TSSLELGIDMGAVDLVIQVESPPSVASGLQRIGRAGHQVGEISQGVLFPKHRTDLIGCAV
TVQRMRSGDIETMHVPANPLDVLAQHTVAAAALEPVDADAWFDAVRRSAPFATLPRSAFE
ATLDLLSGKYPSTEFAELRPRIVYDRDHGTLTARPGAQRLAVTSGGAIPDRGLFTVYLAT
DSEKPSRVGELDEEMVYESRPGDVISLGATSWRITEITHDRVLVIPAPGQPARLPFWRGD
SVGRPAELGAAVGAFTGELATLGRDEFEERCQTMGFDGFATDNLYRLLHDQREATGVVPS
DSTFVVERFRDELGDWRVILHSPYGLRVHGPLALAVGRRLRERYGIDEKPTASDDGIIVR
LPDSGETPPGADLFVFDADEIEPVVTAEVGGSALFASRFRECAARALLLPRRHPGKRSPL
WHQRQRAAQLLDIARKYPDFPIVLETVRECLQDVYDVPALTELMRRVAQRRLRVVEVETA
TPSPFAASLLFGYVGAFMYEGDSPLAERRAAALALDTVLLSELLGRVELRELLDPAVVAS
TSAQLQHLTEERAVRDAEAVADLLRMLGPLTEAEIAERATTEAIGGWLDGLHAAKRALPV
TYAGQSWWAAVEDIGLLRDGVGAPVPVGVPMAFTESVDDPLGDLIGRYARTHGPFTTSEV
ATRFGLGLRVTADVLGRMAVDGRLVRGEFTGAAPAATLGRATSDEWCDAEVLRILRRRSL
AALRAQVEPVSTAAYGRFLPSWQHVGSSHSSGIDGLSSVIEQLAGVLLPASAVESLVFGQ
RVRDYQPAMLDELLASGEVMWSGGGQIGSSDGWVAFHLAETAPLTLPAPVEIEFTDPHRA
IMETLGHGGAYFFRQLTDQASEAELKTALWELIWAGWVTGDTFAPLRAMLSGPRRSGTPA
HRQRQRPPRLSRYSVARPHSRAADPMVSGRWSALPGAEPDSTVRAHFQAELLLNRHGVLT
KGAASAEGVPGGFATLYKVLSAFEDAGRCQRGYFVESLGGAQFAAASTVDRLRSYLDGVD
PQRPDYHAVMLAATDPANPYGAALAWPERAGDADTHRPGRKAGALVALVDGQLVWFLERG
GKTLLSFTSDTETQRAAAAALAELVSGGRIPSLLVERINGVAVLDPGVDEGRAAVQDALT
GAGFSRTPRGLRLR
NT seq 4545 nt   +upstreamnt  +downstreamnt
atgaccaccacgccggccggtccgctggcccggttcagtgcgctgacccgggagtggttc
accgctgcgttcccggcaccgacggccgcgcaggcccaggcctggtcggccatcgccgag
gggctcaacaccctggtcatcgcacccaccggatcaggtaagacgctggcggccttcctg
tgggccatcgacgagctggcgcagttgccgcctggtccccgcaccgggacgacggtgctg
tatgtgtcgccactcaaggccctggccgtcgacgtcgaacgcaacctgcgcaccccgctg
accggcgtcaccagggtcgccgagcggcacggggtgccggccccgtcgatcagcgtcggc
gtccgctccggtgacaccccgcccggtgagcgccgcgcgatgctgagcaagccacccgac
atcctgatcaccacgccggaatccctgtttctgatgctgacgtcggcggcccgcgaaacc
ctggcctcggtgcggaccgtgatcgtcgacgaggttcacgccgtcgccgccaccaaacgc
ggtgcgcacctggcactctcgttggaacggctcgaccagctgctcgacaagccggcccag
cggatcgggctgtcggcgacggtacgtccacccgaggaggtagcgcggttcctgtccggc
caggcccccaccaccatcgtcgcgccgccgtcgggtaaaacgttcgacctctcggtgcag
gtcccgatcccggacatggccaatctcgacaacaacagcatctggcccgccgtcgaggaa
cgcatcgtggacctgatcgaggcccaccgctcctcgatcgtgttcgccaactcccgccgg
ttggccgagcgactgacctcccggctcaacgagattcacgccgaacgtgccggaatcgag
ctctcactcgaccacaacccgcaggtcggtggcggcgccccggcccaactcatggccagc
ggtcaggccagcggcgcaccgccgctgctggcccgggcccaccacggttcggtcagcaag
gagcagcgggccctggtcgaagacgacctcaagagtggccgattgcgcgccgtggtggcc
acctcgagcctggagttgggcatcgacatgggcgcggtcgatctggtgatccaggtcgag
tcgccgccgtcggtggccagcggcctgcagcgcatcgggcgggccgggcaccaggtcggc
gagatctcccagggcgtgctgttccccaagcaccgcaccgacctgatcggctgtgcggtg
acggtgcagcgcatgcgctccggtgacatcgagaccatgcacgtcccggccaatccgctc
gacgtgctggcccagcacaccgtggctgcggccgccctggaaccagtggacgccgacgcc
tggttcgatgcggtacggcggagtgcaccctttgccacgctgccgcgcagcgcgttcgag
gccaccctggatctgttgtccgggaagtacccgtccaccgagttcgccgagctgcggcca
cgcatcgtgtacgaccgcgaccacggaaccctgaccgcccgccccggagcccaacgcctg
gcggtgacctccggcggcgcgatccccgaccgcgggctgttcaccgtctacctggctacc
gactccgaaaaaccctcccgggtaggtgaactcgacgaggagatggtctacgaatcccgc
ccgggcgacgtcatctccctgggtgcgaccagctggcggatcaccgagatcacccacgac
cgggtgctggtgatccccgcgccgggccagccggcccggttgccgttctggcgcggcgac
agcgtgggacgccccgccgaactgggcgctgcggtcggtgcgttcaccggagagctcgcc
acactcggccgcgacgagttcgaagaacgttgccagacaatgggtttcgacgggttcgca
accgacaacctctaccggctactgcatgaccagcgggaggccaccggcgtcgttcccagc
gacagcacgttcgtggtggagcgtttccgggatgaactgggcgactggcgggtgatcctg
cattctccgtacggcctgcgggttcacgggccgctggccctggcggtgggccgtcggctg
cgggaacggtacggcatcgacgagaagcccaccgcgtccgacgacggcatcatcgtgcgc
ctccccgatagtggtgaaaccccgcccggcgcagacctgttcgtgttcgacgccgacgag
atcgaaccggtcgtcaccgcagaggtgggcgggtcggcgttgttcgcgtccaggttccgt
gaatgcgccgcgcgcgccctgttgctgcctcgccgacaccctggcaagcgatcgccgttg
tggcatcaacggcaacgcgccgcgcaactgctcgacatcgcccgcaagtacccggacttc
ccgatcgtgctggaaaccgtccgcgaatgcctgcaggacgtctacgacgtacccgcgctg
accgagctgatgcggcgggtggctcagcggcgcctgcgggtggtcgaggtagagaccgcc
accccctcgccattcgcggcctcgttgctgttcggctacgtgggtgcattcatgtacgag
ggtgacagcccgttggccgagcgtcgcgccgccgcgctggcactggacaccgtgctgctg
tccgaactgctcggccgggtggaactccgcgaactgctggatcccgcggtggtggcctca
acctcggcacagctgcaacacctgaccgaggaacgggccgtgcgcgatgccgaggccgtg
gccgacctgttgcggatgctgggtccgctcaccgaggccgagatcgccgagcgcgccacc
accgaggcgatcgggggctggctcgacgggctgcacgccgccaagcgcgcgctgccggtc
acctacgccggccagagctggtgggccgcggtggaagacatcggcctgctacgcgacggg
gtcggcgcgccggtcccggtcggggtgcccatggccttcaccgaatccgtcgacgaccca
ctcggagacctgatcggtcgctacgcccgcacgcacggcccgttcaccacctccgaggtc
gcgacgcggttcgggctcggcctgcgggtgaccgcagatgtgttgggccgcatggctgtc
gatggccggctggtgcgcggcgagttcaccggagccgccccggctgcgacattgggtcgg
gcgacttccgacgaatggtgcgatgccgaggtgctgcgcatcctgcgccgtcgctccctg
gccgcgctgcgcgcccaggtcgagccggtcagcactgccgcctacggtcgcttcctgccg
tcctggcagcatgtcgggtccagccacagctcgggtatcgacgggctgtcgtcggtcatc
gagcaactggccggcgtcctcctgcccgcgtcggccgtggagtcgctggtcttcggccag
cgggtgcgtgattaccagccggccatgctcgatgagctgctggcgtccggcgaagtgatg
tggtcgggcggcggccagatcggcagcagcgacggctgggtggcattccacctggccgag
acggcgccattgaccctgcccgctcctgtcgagatcgagttcaccgacccgcaccgggcc
atcatggagacgctcggtcacggcggagcgtacttcttccgccagctcaccgatcaggcc
tccgaagccgagctgaaaactgctctgtgggaactgatctgggccggctgggttactggt
gacacgttcgccccgttgcgggcgatgctgtctggtccccgacggtcggggacaccggca
caccggcagcgtcaacgtccaccccggctcagccgctacagcgtcgcgcgcccgcacagc
cgcgcagcggatccgatggtgtccggccggtggtcggcattgcccggcgctgaaccggat
tcgaccgtccgcgcgcatttccaggcggagctgttgctcaaccgacacggggtgctgacc
aagggggcggcgtcggccgagggcgtgccgggcgggttcgcgacgttgtacaaggtgttg
agcgcgttcgaggacgccggccgctgccagcggggctatttcgtcgagtcgctgggcggg
gcgcagttcgcggcggcctcgaccgtcgaccggctgcggtcctacctcgacggggttgat
ccgcagcggcccgactaccacgcggtgatgctcgccgcgaccgacccggccaatccttac
ggcgccgctctggcctggcccgagcgcgcgggcgacgcggacacacaccggccgggccgc
aaggcgggtgccctggtggcgctggtcgacggccaactggtgtggttcctggaacgcggc
ggcaagaccctgctcagcttcacctccgataccgagacgcagcgggccgccgcggccgca
ctggccgaactcgtgagcggcgggcggattccgtcgctcttggtcgagcggatcaacggg
gtcgcggtgctcgatcccggtgtcgacgaaggccgcgccgccgtgcaggacgcgctgacc
ggtgccgggttttcgcgcacgccgcgcggtttgcggcttcggtag

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