Mycolicibacterium alvei: MALV_25030
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Entry
MALV_25030 CDS
T06961
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
malv
Mycolicibacterium alvei
Pathway
malv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
malv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MALV_25030 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
malv03400
]
MALV_25030 (recB)
Enzymes [BR:
malv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MALV_25030 (recB)
DNA repair and recombination proteins [BR:
malv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MALV_25030 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
AAA_30
UvrD_C_2
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BBX27378
UniProt:
A0A6N4USH8
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All DBs
Position
2550999..2554253
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AA seq
1084 aa
AA seq
DB search
MNVFDLLGPLPKANSTTVLEASAGTGKTFALAGLVTRLVAEGAATLDQMLLITFGRAASQ
ELRERVRAQIVGALAALEDPARADNDLLRYLIAEDQQARGQRLRDALAGFDAATIATTHQ
FCQIVLKSLGVAGDSDSGVTLVESLDELVCEIVDDLYLAHFGALRETPELGYAEALKLAR
VVVANPATELRPLEPEPESPAGIRVAFARAVLAELEIRKRRRGVLGYDDLLTRLAGALAA
QGSAARVRMAQRWPIVMVDEFQDTDPVQWQVIERAFSGHSTLILIGDPKQAIYAFRGGDI
DTYLRAAATAGDKQTLGTNWRSDSVLVDRLQAVLRGAELGGPDIVVHDVQAHHQGHRLAG
APYNDPFRLRVVPRNRTGTKVIPIADLRHHIGRDLAADIGALLASGATYADRQLQAGDIA
VIVETHKDAGACHTALLDAGIPAVYTGDSDVFNSDAAGDWLYLLEAFDQPHRTGLVRAAA
ATMFFGETAETLAAGGDALTDRVADTLRTWAGHARDRGVAAIFEAAQLAGMSRRVLSWQG
GERLMTDLAQVTQLLGDTSHREGFGLAALRDWLRTQRSEGRGSSERNRRLDSDAAAVQIM
TVWVSKGLQFPIVYLPFAFNRYVPEPDLVLFHDEGVRCLQIGGPDPAVTRAGRAEAAADD
SRLTYVAMTRAQSQVVAWWAPSNDEPNGGLSRLLRGRAPGQSVVPDRCAPARVSDDDALA
RLQAWEAAGGPLLEESVIGAVMPVPAQAIPDDLAARHFHRSIDTAWRRTSYSGLLRAAED
AGNSGVSSEPEVAELDDESTDIAVVAPAQGADVPSPMASLPTGAAFGSLVHAVLETADPL
AADLTSELLAEVRRHAARWPVEIEADELAAALVPMHDTPLGPLAPGMTLRQIGLADRLCE
LDFEFPMAGGDLRGGEYARLAEIGALLDEHLPADDPMAVYAERLSTGLLGRQPLRGYLSG
SVDVVLRIGQRFVIVDYKTNWLGTGDAPLTAADYGRGRMAEAMLHSDYPLQALLYSVVLH
RFLSWRLPDYDPGTHLGGAMYLFVRGMCGPQTPVVDGHPAGVFGWEPPAALVVAMSELLD
QGAR
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtcttcgatctgctcggcccgttgccgaaggccaacagcaccacggtgttggag
gccagcgcgggcaccggcaagacctttgcgctggccggtctggtgacccgcctggtggcc
gagggcgcggcgacgctggatcagatgctgctcatcacgttcggccgggctgccagtcag
gagttgcgggagcgggtgcgggcccagatcgtcggtgcgctggcggcgttggaggacccg
gctcgcgccgacaacgatctactgcggtatctgatcgccgaggaccagcaggcccgcggg
cagcggctgcgcgacgccctggctggtttcgacgcggcgacgatcgccaccacgcatcag
ttctgccagatcgtcctgaaatcccttggtgtggccggagacagcgattcgggtgtgacg
ctggtcgagagtctggacgagttggtctgcgagatcgtggacgatctgtatctcgcccac
ttcggcgctctgcgggaaaccccggagctggggtatgccgaggcgctgaaactggcccgg
gtggtggtggccaatccggcgaccgagttgcgcccgctggaacctgaaccggagtccccg
gcggggattcgggtggcgttcgcgcgggcggtgctggcggagttggagattcgcaagcgg
cggcgcggcgtgctgggctatgacgatctgctgacccggctggccggggcgctggccgct
caaggttccgcggcgcgggtacgaatggcgcagcgctggccgatcgtgatggtcgacgag
ttccaggacaccgacccggtgcagtggcaggtgatcgagcgggcgttctccgggcattcc
acgctgatcctgatcggtgaccccaagcaggcgatctacgcattccgcggcggcgatatc
gacacctatctgcgggccgcggcgaccgccggagacaagcagacgctgggcaccaactgg
cgtagcgacagcgtgctggtcgaccggttgcaggcggtgctgcgcggtgccgaactcggg
ggccccgacatcgtggtgcacgacgtgcaggcacaccatcagggtcatcggctggccggg
gcgccctacaacgatcccttccggctgcgggtggtgccgcggaaccgcaccggcaccaag
gtgattccgatcgccgacctgcgccaccacatcggtcgggatctggccgccgacatcggg
gcattgttggccagcggcgccacctatgccgaccggcagctgcaagcgggcgatatcgcg
gtgatcgtcgagacccacaaggacgccggggcctgccataccgcgctgctcgacgccggt
atccccgcggtctacaccggggattcggatgtgttcaattccgatgcggccggggactgg
ctgtatctgttggaggccttcgatcagccgcaccgcaccgggctggtgcgtgccgcggcg
gccacgatgttcttcggggagaccgcggaaactcttgccgcgggcggtgatgcgttgacc
gaccgggtcgccgacacgctgcgcacctgggccggtcatgcccgggatcggggtgtggcg
gcgatattcgaggctgcgcagctggccgggatgagcaggcgggtgctgtcgtggcagggt
ggcgagcggttgatgaccgatctggcgcaggtgacccagctcctgggcgacacctcgcac
cgggagggcttcgggctggccgccctgcgggattggctgcgcacccagcggtctgagggc
cggggttcgtccgaacgcaaccgtcgcctcgacagcgacgcggccgcggtgcagatcatg
acggtgtgggtgagcaagggactgcagttcccgatcgtgtatctgccgttcgcgttcaat
cggtatgtgccggagccggatctggtgttgttccacgacgagggggtgcgctgcctgcag
atcggtggccccgatccggcggttacccgcgccgggcgggccgaggccgccgccgatgac
agccgcctgacctatgtggcgatgacccgggcccagtcgcaggtggtggcgtggtgggcg
ccgtccaacgacgagccgaacggcggcctgtcgcgcctgttgcggggccgtgcgcccggg
cagtccgtggtgcccgaccgttgtgcaccggcccgggtctccgatgacgatgcgctggcc
cggctgcaggcctgggaggccgcgggtggtccgctgctggaggagtcggtgatcggtgcg
gtcatgccggtgccggctcaggcgataccggatgatctggcggcacggcattttcatcgc
tccatcgacaccgcgtggcggcgcacgtcgtattcggggctgctgcgggcggccgaagac
gccgggaattccggggtgtccagcgagcccgaggtcgccgagctcgacgacgagtcgacc
gacatcgccgtcgtcgcccccgcccagggtgccgacgtgccctccccgatggcgtcgctg
ccgaccggggccgcgttcggatcgcttgtgcacgcggtgctggagaccgccgacccgctg
gccgcggatctgacatccgaactgctggccgaggtccgccgccacgcggcccgctggccc
gtcgagatcgaggccgacgaactcgccgccgcgctggtgccgatgcacgacactccgttg
ggcccgttggcgcccggcatgacgctgcgccagatcgggttggcggaccggttgtgcgag
ttggacttcgagttcccaatggccggcggcgatctgcgcggcggtgagtacgcccggttg
gccgagatcggggccctgctcgacgagcatctccctgcagacgatccgatggccgtctat
gccgagcggttgtcgaccgggctgctgggccgtcagccgctgcgcggctacctgtccggt
tcggtggatgtggtgctgcggatcgggcaacgcttcgtgatcgtcgactacaagaccaac
tggctgggcaccggcgacgcgccgctcaccgcggccgattacgggcgtggccggatggcg
gaagccatgctgcactcggactatccgttgcaggcgttgttgtacagcgttgtattgcac
cggttcctgagctggcggctgccggactacgacccgggcacacatctgggcggggcgatg
tacctgttcgtgcgcgggatgtgcgggccgcagacgcccgtcgtcgacggacacccggcc
ggggtgttcggctgggagccacccgccgcgttggtcgtcgcgatgtcggagctactggat
cagggggcccgatga
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