Mesorhizobium australicum: Mesau_04204
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Entry
Mesau_04204 CDS
T02417
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mam
Mesorhizobium australicum
Pathway
mam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mesau_04204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mam03019
]
Mesau_04204
Enzymes [BR:
mam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mesau_04204
Messenger RNA biogenesis [BR:
mam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mesau_04204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AGB46547
UniProt:
L0KM83
LinkDB
All DBs
Position
complement(4275769..4277190)
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AA seq
473 aa
AA seq
DB search
MTNENTLPGNDTAELSGFAALGITGALLKATHNAGFAEPKPIQMQAIPPQLEGRDIFGIA
QTGSGKTAAFALPILSKIIALGTKRRAKTTRALILAPTRELAVQIEDTIKILAKGAHVST
ALVLGGVSRFSQVKKVAPGVDILIATPGRLTDLVREGDLILSDTKWLVLDEGDRMLDMGF
INDVKRIAKATAPDRQTALFSATMPDEIAELAKGLLKNPVRIEVSPQSTAAAEIVQGVVF
ARTKQKRQVLSTMLADEAMKSVIIFSRTKHGADRVTKDLERDGFKAAVIHGNKSQNARQK
ALNDFRDGSVRILVATDIAARGIDVPGISHVVNFDLPDEAESYVHRIGRTGRNGMDGIAI
TLCDPSENSKLRQVERIIRTKLPIVADHLGSPDPARNPAEKNERFEPANDRDRNGRRDGR
RPGGEKKPNNGFGKKRFGDKPAFAGERKPEGAKPFKGNNKRRFGGKRPAARAA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaacgaaaacacattgcccggcaacgacaccgcggaactctccggtttcgcggcg
ctgggaattaccggtgcgctgctcaaggccacccacaatgccggcttcgccgaaccgaag
ccgatccagatgcaggcgatcccgccgcagctggaaggccgtgacattttcggcatcgcc
cagaccggctccggcaagaccgctgccttcgcgctgccgatcctgtcgaagatcatcgca
ctcggcaccaagcggcgcgccaagacgacccgcgcgctcatcctggcgccgacccgcgaa
ctcgcggtgcaaatcgaggacaccatcaagatcctcgccaagggcgcgcatgtctcgacg
gcactcgtgctgggcggtgtctcgcgcttcagccaggtgaagaaggttgctcccggcgtc
gatatcctcatcgccacgcccggccggttgaccgacctggtgcgcgagggcgacctcatc
ctctccgacaccaaatggctggtgctggacgagggcgaccgcatgctcgacatgggcttc
atcaacgacgtcaagcgcatcgccaaggcgaccgcgcccgatcgtcagacggcgctgttc
tcggccaccatgccggacgagatcgccgaactcgccaagggcctcctgaagaacccggtc
cgcatcgaggtctcgccgcaaagcaccgcggcggcagagatcgtccagggcgtcgtcttc
gcccgcaccaagcagaagcgccaggtgctgtcgacgatgctcgccgacgaagcgatgaag
tccgtcatcatcttctcgcgcaccaagcatggcgcggaccgggtgaccaaggacctggaa
cgcgacggcttcaaggccgccgtcattcatggcaacaagtcgcagaatgcccgtcagaag
gcactgaatgatttccgtgatggatcggtgcgcattctggtcgcgaccgacatcgccgcg
cgcggcatcgacgtgcccggcatcagccatgtcgtgaatttcgacctgccggacgaagcc
gaaagctatgtccaccgtatcggccgcaccggccgcaacggtatggatggcatcgcgatc
acgctctgcgatccttcggagaacagcaagctgcgtcaggtcgagcgcatcatccgcacg
aagctgccaatcgttgccgaccatctcggcagccccgatcccgcacgcaatcctgcggaa
aagaacgagcgcttcgaacctgccaacgatcgcgaccgcaatggccgtcgcgacggcagg
cggccgggcggcgagaagaagccgaacaacggcttcggcaagaagcgtttcggcgacaag
ccggcctttgccggtgagcgcaagccggaaggtgcaaaacccttcaagggcaacaacaag
cgccgcttcggcggcaagcgtccggccgcacgggctgcctaa
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