Candidatus Mycosynbacter amalyticus: GII36_01875
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Entry
GII36_01875 CDS
T08481
Name
(GenBank) type IV secretion system DNA-binding domain-containing protein
Organism
mama
Candidatus Mycosynbacter amalyticus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwB_AAD_bind
T4SS-DNA_transf
TraG-D_C
DUF87
AAA_10
AAA_16
AAA_22
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QHN42597
UniProt:
A0A857MT36
LinkDB
All DBs
Position
complement(345591..348377)
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AA seq
928 aa
AA seq
DB search
MKIINIMNFFVEFIQLILSPYVWVPVCLILGGLAVWNNRKIKQIQTVESTLLILEIPKTN
DKSELAAEQLFASLHGILRDAEELKRAGGVQEHLSFEIASVGGQIRFYVWTPTTLQSFVE
GQIYAQYPTVQIHEADEDYVAHERHHSVVHTAEITLTDSEFLPLKTFQSFEVDPLAGITG
TLAKLEDTGEELWIQVLVRPVPDSWHKNSNAWISKVKNGGGFSISSGFDMKWLGTLAEAL
VKPPETGAGGEAKPKELSERDKTRIAEAEKKATKLGYQVKIRLAYLGESQANAKLRMQAL
VGTYKQYNSTNLNGFKQSNSSMDKDSLGAYRSRVFMGGDGFVLNIEELASVFHLPHTNVE
TPNIVWASTKTAEPPAKLPVITGNEAIDENISAFGLTNFRGINHQFGMLRYDRSRHVYII
GQTGAGKSGLLELFALSDVYHNQGYAIIDPHGDFAINNMKFIPAHRIKDVVYFNPADTAH
PVGFNPLEVTDPNMKSNISSEVIGVLKRMFGESWGPRLEYILRYTILALLDRPETTMLDI
TRMLTDKKFRKETLDYCTDTVVLQFWKVEFASWNDKFVAEAIAPVLNKVGAFTANPVIRN
IIGQPKSTFNIREIMDDGKILVVNLSKGLIGEDNAGILGSFLVTKIQLAAMSRSDIPNVE
DRRPFYLYVDEFQNFATDSFATILSEARKYGLNLTVANQYISQMSDTVRGAVFGNVGTMI
SFRVSAEDAQILAQQFQPQFEANDLLQMHNRHFIVNMVIKGEKAPAFSATTLNLPPPQVD
NSAYIIQNSREQFSLPRAEVEQAISDLIQPPEQLKKPKATPTTPVPDTKQWPINAQTQMI
TPDSATPPPVPAETVPPAPTAPPVASVADDGTLQIRHDRKKKPTAATQQPAVTSSPAPAQ
TEEGSRDAPKKRKRKRTRKKKPATPTES
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcataaatattatgaattttttcgtcgagtttatccagctcatcctatccccg
tacgtatgggtccccgtatgtctcatcttgggtggactcgccgtctggaataaccgcaag
atcaaacaaatccagaccgtcgaaagtacactcctcatcctcgaaatcccgaaaaccaac
gacaaatctgaacttgccgcagagcagctatttgccagcctgcacggtattttgcgcgat
gccgaagagctcaagcgtgctgggggagtgcaggaacacctgagtttcgaaattgcttcg
gtaggcggccaaattcgcttctatgtttggacccccacgacgctccagagcttcgtcgaa
ggccagatctacgcccagtatccaaccgtacagattcacgaagccgacgaagactacgtc
gcacacgaacgccaccacagcgtcgtccatactgccgagatcacccttacagacagcgag
tttttgccgctcaaaacgttccagagcttcgaagtcgacccacttgccggtatcaccggt
acactcgccaagctcgaagacaccggagaagagctctggattcaagtactggtgcgccca
gtccccgacagttggcacaaaaacagcaatgcttggatcagcaaagtcaaaaacggtggg
ggattcagtatatcgagtggctttgatatgaaatggctcggcacactggccgaggcactt
gtaaaaccgccagagaccggagcaggcggtgaggccaagcctaaagagttatccgagcgc
gataaaacccgtatcgccgaagccgagaaaaaggcaaccaaactcggctaccaagtcaaa
atccgtctggcctacctcggcgaaagccaagccaatgccaagctccgcatgcaggccttg
gtggggacctataaacagtacaacagcaccaatctcaacggtttcaaacaatcaaacagc
agcatggacaaagattcgctgggcgcgtatcgtagccgtgtcttcatgggcggcgacggc
ttcgtgctcaatatcgaagagctcgccagcgtcttccacctgccgcacacaaacgtggag
acaccaaacattgtctgggccagcaccaagacggccgagccgccggccaaactacccgtc
atcaccggcaacgaagcaatcgacgaaaacatctctgcgtttggcctgacaaacttccgt
ggtataaatcaccagttcggcatgttacgttacgatcgctcacgccatgtctacatcatc
ggtcagacgggtgctggtaagtccggcttgctcgaactgtttgctctgagcgacgtctac
cacaaccaaggctacgctatcatcgatccgcacggcgattttgctatcaataacatgaag
tttatcccggcgcaccgtatcaaagacgtcgtgtatttcaatccagccgacaccgcgcat
cccgtcggtttcaacccgctcgaagtcaccgatcccaacatgaaaagcaacatcagctct
gaagttatcggcgtgctcaagcgtatgttcggtgaatcgtgggggccacgcctagagtat
attttgcgctacaccattttggcactgctcgaccgtccagagacgactatgctcgacatc
acacgcatgcttacagacaagaagttccgcaaagaaacgcttgattactgtaccgacaca
gtagtgcttcagttctggaaagtagaatttgccagctggaacgacaagtttgtggccgaa
gccatcgcgcctgtgctcaacaaggtgggcgctttcactgccaacccggtcattcgcaat
atcatcggtcagccgaagagtacattcaatatccgcgagatcatggatgacggcaaaatc
ctggtagtgaatctgagcaaggggctcataggcgaagataatgctggtatcctcggtagt
ttcctggtcaccaagatccagcttgccgccatgagccgcagtgacatccccaatgtcgaa
gaccgtcggccattctatctctatgtggacgagttccaaaactttgcgaccgactcgttt
gccactattctctccgaagctcgtaaatacggactcaacctcaccgttgccaatcagtat
atctcgcagatgagtgacacggtgcgcggcgcagtgtttggtaacgttggaaccatgata
tctttccgcgtctcggccgaagatgcccagatactcgcgcagcagttccagccgcagttc
gaggcaaatgatctgctacagatgcataatcgccatttcatcgtgaatatggtcatcaag
ggagagaaagccccggctttcagcgccaccacgctcaatctgccaccaccacaagtagac
aattcagcttatatcatccaaaacagccgggaacagtttagcctgccacgagccgaagtg
gaacaggcgattagtgatctcatccagccgccagagcagctcaagaagccaaaagcaacc
ccaactactcctgttcccgacacaaaacaatggccgatcaacgcccagacgcagatgata
actccggactccgccacaccgccacccgtgccagccgagacggtgccaccagcacctacc
gcgccgcctgtcgcttcagtggcagacgatggcacactacaaattcgtcacgatcgcaag
aaaaaacccactgccgccacgcagcagcccgccgttaccagcagcccagctccagcgcaa
acagaagaaggttctagagatgcaccgaagaaacgcaagcgcaaacgtacccgcaagaaa
aaaccggcaactccaaccgaatcttga
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