Candidatus Mycosynbacter amalyticus: GII36_04315
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Entry
GII36_04315 CDS
T08481
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
mama
Candidatus Mycosynbacter amalyticus
Pathway
mama03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mama00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GII36_04315 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mama03400
]
GII36_04315 (uvrA)
DNA repair and recombination proteins [BR:
mama03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GII36_04315 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GII36_04315 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
AAA_21
nSTAND1
AAA_22
AAA_33
nSTAND3
DnaJ_CXXCXGXG
Viral_helicase1
cobW
BCA_ABC_TP_C
ExoX-like_C
Septin
Motif
Other DBs
NCBI-ProteinID:
QHN43053
UniProt:
A0A857MKH0
LinkDB
All DBs
Position
complement(774346..777159)
Genome browser
AA seq
937 aa
AA seq
DB search
MPEVIRVTGAKEHNLKDVSVEIPRDKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSS
YARQFLGIMDKPDVESIDGLSPAISIDQKSTSRNPRSTVATVTEIYDYLRLLYARIGVPH
DPITGREVTRRTKDDIIDEVMQIAEGTRLMLLAPIAKDKKGEFAHVPEQYTRAGFARARV
DGVVYALDEFPTLKKNDRHTIEIVVDRLVMAADMRTRVAQSIEQALDVGGGIIGIYYADT
DEVHMLSQRYASLDNPDIEIPELEPRLFSYNTPQGACPVCTGLGTRLEVDPELVFNPNLT
IAEGAIRPYNRVNQDAWWLKKLAEVASAHRFNLQVPVKELSEEAIQKVLYGTGNQKYRVK
LGTGRYYDSTYEGVIPNLERRHKETDSEFMRKDIERFMREKKCHACGGKRLKPVVLAVTV
HGYNIMDICGLGIDEALDLFRNHFELTEQEQFIARAIMKEIVSRLTFMSNVGLNYLELGR
AANTLSGGEAQRIRLATQIGSGLQGVLYVLDEPSIGLHQRDNDRLIATLKRLRDLGNTVL
VVEHDEDTIREADYLLDIGPGAGVKGGEVVAAGTPAEVAKNPDSITGRYLSGTDKIEVPK
KRRTVEKDRKLIIRGARENNLKNVDVEFPLGLMTVVSGVSGSGKSTLVNDILAKELSARL
HRAQTVPGAHDDIEGIGQLDKVIIIDQSAIGRTPRSNPATYTGIFTPIRELFASTPEANI
RGYKAGRFSFNVKGGRCENCQGDGMIKIEMHFLPDVYVTCDVCKGKRYNQEALEIKYKGK
TISDVLEMTVETAAEFFENVPAVQRKLETLVDVGLGYIRLGQPATTFSGGEAQRIKLATE
LSRRSTGKTLYILDEPTTGLHSADVKRLLGILQKLVEGGNSMVIIEHNLDVIKTADHLID
MGPEGGSGGGTVVATGTPEELTKVAASFTGKYLKTLL
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgccagaggtgatacgggttacaggtgccaaagagcacaatctcaaagatgtgtcggta
gagataccgcgcgataaattagtggtgattacgggtcttagcggatcgggcaagtccagc
ttggcgtttgacactatctatgctgaaggccagcgtcgttacgtggagagtctcagtagc
tacgcacgccaattcctcggtatcatggacaaaccggacgtggaaagtatcgatggcctg
agtccggcaatctcgatcgaccagaaatcgaccagccgcaatccgcgcagtactgtggcg
actgtcacagaaatctacgattacctgcgcttgctctatgcccgcatcggtgtgccccat
gatcctattaccggacgtgaagtcacgcgccggacgaaggacgacattatcgacgaagtg
atgcagattgccgaaggcacgcgactgatgttactagcgcctatcgccaaagacaaaaaa
ggcgaatttgctcacgtacccgaacagtacactcgcgccggattcgcacgtgcgcgtgtc
gacggtgtagtatatgcgctcgacgaattccctacgctcaagaagaacgatcgccatacc
atcgaaatagtagtggatcgcctggttatggctgccgacatgcgtacgcgagtggcgcaa
agtatcgagcaagcactcgacgtaggtgggggaatcattggtatttactatgccgatacg
gacgaagtgcacatgctcagtcagcgttacgcttcgctagacaaccccgatatcgagata
ccagagctcgagccgcgcctgtttagctacaacacaccacaaggcgcatgcccagtctgt
actggcctaggtactcggctcgaagttgatccggagctagtgttcaacccaaatctgaca
attgccgaaggtgcaatccgcccgtataaccgtgtgaatcaagatgcatggtggctcaag
aagctggccgaagtggcaagtgcgcataggtttaatctacaggtgccggtgaaagaatta
tccgaagaggcgatccagaaagttctctatggtacgggtaatcagaaatatagggttaaa
ctcggtaccggtcgctattatgactccacgtatgaaggcgtaattccgaatttggagcgc
cgtcacaaagagaccgatagcgagtttatgcgcaaagatatcgagcgtttcatgcgtgag
aaaaaatgtcacgcctgcggtggcaagcgtctcaaacctgtggtgttggcagtgacagtg
catggctacaatatcatggatatttgcggacttggtattgatgaggcgttggacttgttc
cggaatcattttgaactcacagagcaggagcagttcatcgctcgcgctattatgaaagaa
atcgtatctcgcctgacatttatgagcaacgtagggctgaattatctagagcttggtcgt
gccgctaatacactcagtggcggagaggcacaacgtatccgcttggcgacgcagattggt
tctggcctgcaaggagtactatatgtgcttgacgaaccatctatcggcttgcatcagcgc
gacaatgaccgtctgattgctacacttaaacgcctacgcgatctcggcaatacggtgcta
gtggtcgagcacgacgaagacactattcgcgaagccgactacctgcttgatatcggccct
ggggcaggggtgaagggtggagaagtggtggctgcgggtacaccggccgaagttgccaaa
aatccagacagtatcactggtcgctacctgagtggaactgacaaaatagaggtgccaaag
aagcgtcgcacagtggagaaagatcgcaagcttatcattcgtggtgcccgcgaaaataac
ctcaaaaacgttgatgtcgagttcccgcttggcctgatgacggtagtaagcggcgtgagc
ggcagtggcaaatcgacgctggtgaatgacatcttggctaaagagctttctgctcgccta
catcgtgcccagactgtacctggagcacacgatgatatcgaaggtatcggccagcttgat
aaggtcattatcatcgaccagtcggctatcggacgcactccccgctccaatcctgctacc
tacacgggtatctttacgccgattcgcgagctcttcgccagtacaccagaggcaaatatt
cgtgggtacaaagcagggcgcttcagcttcaatgtcaaaggcggccgctgtgaaaactgt
cagggcgacggtatgatcaagatcgagatgcacttcctgccagacgtatatgtgacatgt
gatgtgtgtaagggcaaacgctacaaccaagaggcgctcgagatcaaatacaaaggcaaa
actatcagcgacgtcctagagatgacagtagagacggcagcagagttcttcgaaaatgta
ccagctgtgcaacgcaagctcgagacattggtggatgtgggcctcggctatattcgcttg
ggccagcctgccacgacatttagcggcggcgaagcgcagcgtatcaaactcgcgactgag
ctgtctcgtcgtagtactggcaagacactctacattctggacgaaccgacgacaggtctg
cactcggcggacgtcaagcgcctacttggcatactccagaaacttgttgagggcggtaat
agcatggtcatcatcgagcacaatctcgacgtcatcaagacagccgatcatctgatcgat
atgggccccgaaggtggtagcggtggcggtactgtggtggcaactggtacaccagaagag
ctcacaaaagtcgcagcttcgtttactggcaaatatctcaagacgttactttag
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