Candidatus Mycosynbacter amalyticus: GII36_04325
Help
Entry
GII36_04325 CDS
T08481
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
mama
Candidatus Mycosynbacter amalyticus
Pathway
mama03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mama00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GII36_04325 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mama03400
]
GII36_04325 (sbcB)
Enzymes [BR:
mama01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
GII36_04325 (sbcB)
DNA repair and recombination proteins [BR:
mama03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GII36_04325 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GII36_04325 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GII36_04325 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QHN43055
UniProt:
A0A857MMJ9
LinkDB
All DBs
Position
complement(777592..779025)
Genome browser
AA seq
477 aa
AA seq
DB search
MAQTFFFYDLETTGLNPREDRIMQFAGQRTDMNFNPIGESYNLLVALNDDTLPSPYALMV
TGVTPQETVADGYTEAQFAKIFMEEIATPDTIMLGYNSIRFDDEFMRAFLWRNYYDPYEW
TWKDGRSRWDMLDVVRMTRALRPDGIKWPTVDGKAVNKLELLSAENGLAHEKAHDALSDV
VALIGVTKLIAAQQPQLFQYLLKLRNKKEIQKLVNLDDKQPFVYSSGRYDADHDKTTVAL
PLAAADYGNVFVYDLRYDPTDWTSKSEKELADILFTPYADRGDDYRKLPVKKLQYNRAPA
VAPLGVLSQEDGWAKLQLNQATIEKHRALLLSHPEFAGRVANVLMKKPDWPPISDAEGQL
YDGFISDRDKLRSEVLRNTDMKDLKLYKPEFDDARLSALFPRYKARNFPRQSTPEELASY
ETWRAAHLQAKAPQFMQDMQKVAAAELTDHQQFVLTELKLWFESIMPEPAEPDTSEE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaactttcttcttttacgacctcgagacgaccggcctcaacccgcgcgaagac
cggatcatgcagttcgccgggcagcgcactgacatgaatttcaacccaataggcgagtcg
tacaatctgctggtagcgctaaacgacgatacactgccaagtccgtatgcactcatggtg
acaggtgtgacgccacaggaaacggtggcagacggctataccgaggcacagtttgccaag
atcttcatggaggagatcgctacgccggacactatcatgctgggttacaacagtatccgt
ttcgacgatgagtttatgcgtgcgtttttgtggcgaaattattacgatccgtacgaatgg
acctggaaagacggtcgttcgcgctgggatatgctcgacgtggtgcgcatgacgcgggca
ctgcgaccagatggtatcaaatggccgacagttgacggcaaagctgttaataagctcgag
cttctgagcgcagaaaacgggctagcgcatgagaaagcgcacgatgcactaagcgatgtg
gtagcactgatcggcgtgacgaaactgatcgccgcgcagcagccgcaacttttccagtat
cttctcaaacttcgtaacaagaaagagattcagaaattggtaaatctcgacgacaagcag
ccgtttgtctacagctcgggtcgctatgatgccgaccacgataagacgaccgtagcgctt
ccactcgccgcggcagattatggcaatgtgtttgtgtatgatctacgttacgatccgacg
gattggaccagtaagagcgagaaagagttggccgatattctgtttactccatacgccgat
cgcggtgatgactatcggaagctgcctgtaaagaagctgcaatacaaccgtgcgccagca
gtggcacccctcggcgtgctaagtcaagaagacggctgggccaagctacaactcaaccaa
gcgacaatagaaaaacatcgtgcactactcctctcgcatcctgaattcgccgggcgagtg
gcgaacgtacttatgaagaagcccgactggccaccgatatctgatgcagaggggcaactg
tacgatggcttcataagcgaccgtgacaaactccgtagtgaagtgctgcgcaatacggac
atgaaagatctcaaactctacaaaccagagttcgatgatgcgcgcctgtccgcgctcttc
cctcgctacaaagctcgtaattttccgcggcagtcgacaccggaggagttggcgagttac
gaaacgtggcgagccgcacatctgcaggcaaaagcgccgcagttcatgcaggatatgcag
aaagtcgctgctgctgagttgaccgatcatcagcagttcgtgctcaccgagctcaaacta
tggtttgaatcgatcatgccagagccagccgagccggatactagcgaggaatag
DBGET
integrated database retrieval system