Candidatus Mycosynbacter amalyticus: GII36_04835
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Entry
GII36_04835 CDS
T08481
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
mama
Candidatus Mycosynbacter amalyticus
Pathway
mama03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mama00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GII36_04835 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mama03019
]
GII36_04835 (rny)
Messenger RNA biogenesis [BR:
mama03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GII36_04835 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Ribosomal_S18
KH_PNO1_2nd
KH-I_KHDC4-BBP
KH_2
DUF1963
DUF2730
DUF5600
Motif
Other DBs
NCBI-ProteinID:
QHN43146
UniProt:
A0A857MKQ6
LinkDB
All DBs
Position
complement(878981..880489)
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AA seq
502 aa
AA seq
DB search
MIEILAAVVGLLLGVGGAVGYERSQRAGAKRKGEHAIADAEKKANDIVLKAQHKAIEITD
GAKKDEAQARKELKRTEDRLLDRETSLDRKLDELDKRAERMRTQEDEIEKLKIEIRDIRG
KQQEKLEKIAKLKKEDAAEKLMEMTERDIKHDLVGLVSKLQNDAMEDAEERAQTILLTAM
ERMSSEVTAERTVTALKLTDDEMKGRIIGKEGRNIQAIQRETGVDVLVDDTPGMVVLSSF
DPVRRQVARVTMEMLMKDGRIHPGRIEEVVAKAQKQVDKEIKQAGEDAAREVGVVGIPKE
MLRLLGELKFRTSYGQNVLKHSTEMAQIAGMIADEIGADIRTVKIATLLHDVGKAVTHKV
EGKHHHIGAELARKYGMKPEVVHAIEAHHDDIEATTPEALVVRVVDAASAARPGARNISA
ENFAERMRELENVATSFKGIDKAYAISAGREVRVIVSPKAVDDLSAIRLARDIATKIEST
MQYPGTIKVNVIRETRAIEFAK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgatagagattcttgccgcagtggtaggacttcttttgggtgtaggtggggcggttggc
tacgagcgctcgcagcgcgctggcgccaagcgcaaaggcgaacacgctatagccgacgcc
gagaaaaaagccaacgatattgtactaaaagcccaacacaaggctatcgaaattaccgac
ggtgccaaaaaagacgaagctcaggcgcgcaaagagctcaagcgtaccgaagaccgtttg
ctcgaccgcgagacctcactcgaccgtaaactcgatgagctcgacaaacgtgccgagaga
atgcgtacgcaagaggatgagatcgagaagctaaaaatcgagattcgtgatattcgtggc
aagcagcaggaaaagctggagaagattgccaagctgaaaaaagaagatgcggctgaaaag
ctcatggagatgacggagcgagatatcaaacatgatctcgtaggacttgtcagtaaactg
caaaacgacgccatggaagatgccgaagagcgtgcgcagacgatcctgctcacggccatg
gaacgtatgagcagcgaagtgacggccgaacgcactgtgacggcactcaaacttaccgat
gacgagatgaaaggccgtatcatcggcaaagaaggccgcaatatccaggctatccaacgc
gagaccggtgtggatgtgctcgtagatgacacgccgggtatggtggtgctgtctagcttt
gaccctgtgcgtcgccaggtagctcgtgtcactatggaaatgctcatgaaagacggtcgt
attcatccgggtcgtatcgaagaagtggtggccaaagcccagaagcaagtcgacaaagaa
atcaaacaggccggtgaagacgcggctcgcgaagtcggtgtcgtcggtataccaaaagaa
atgctgcgcctgctcggtgaactcaaatttcgcacgagttatgggcagaacgtgctcaag
catagtaccgaaatggcgcagatcgccggtatgatcgccgatgagatcggcgcagatatt
cgtacggtcaaaatcgccaccttgctgcatgacgtaggcaaagctgtcacacataaagtt
gaaggcaaacatcatcatattggagcggaacttgcgcgcaaatatggtatgaaacccgaa
gttgtccatgccatagaagctcaccacgatgatatcgaagccaccacgccagaagcgctt
gtggtgcgcgtagtcgatgctgcgagtgcagctcgtccaggcgctcgtaatatctcggca
gagaactttgctgaacgtatgcgtgaactcgaaaacgttgctactagcttcaagggcatc
gataaagcgtacgccatcagtgctggccgcgaagttcgcgtcatcgtgagtccgaaggcg
gttgatgatctgagcgctatccgcctcgcgcgcgatatcgccaccaagatcgaaagcacc
atgcaatatcctggtactatcaaagtcaatgtcattcgcgagacccgcgcgatagagttt
gcgaaataa
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