Megalobrama amblycephala (Wuchang bream): 125242814
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Entry
125242814 CDS
T08212
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125242814 (wdtc1)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125242814 (wdtc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_RFWD3
TPR_19
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_RIG_2nd
TPR_2
Beta-prop_IFT122_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_WDR35_TULP_N
ANAPC3
Beta-prop_WDR19_1st
TPR_17
TPR_1
Barstar
TPR_16
TPR_6
TPR_9
Motif
Other DBs
NCBI-GeneID:
125242814
NCBI-ProteinID:
XP_048007742
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All DBs
Position
LG13:37249208..37265718
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AA seq
673 aa
AA seq
DB search
MTCCETMSLRNVTSDLLHRQIREKRALDFQRHYHVTDPFIKRLGLEAELQGHSGCVNCLE
WNEKGDLLASGSDDQHAIIWDPFRHKKLITMHTGHAANIFSVKFLPHSEDRILITGAADT
KVHVHDLTAKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGIIRQYDLRESSKRSEVL
IDLTEYCGQLVEAKCLAINPRDNNYMAVGANGPFVRLYDIRMIHNHRKSMSQSTSAGVHT
FCDKRKSIPDGAGQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYL
FDLTFKQRPYTFLLPKKCHPSSEVQNGKTTNGVSNGIHLPASRLKLAKLTSGSNDLPPHL
ERIKQQANDAFARQQWTQAIQLYSLGLHEASQNAMLYGNRAAAYMKRKWDGDHYDALRDC
LKALSLNPGHLKAHFRLARCLFELKYIAEALECLDDFKGKFPEQAHSSACDALDKDIKAA
LFSKTESSDDKKGNSSIRLHNFSRKESIPEDEIVLRERSFDYKHRYCGHCNTTTDIKEAN
FFGSKGQYIVSGSDDGSFFIWEKETTNLVRILQGDESIVNCLQPHPSYCFLATSGIDPVV
RLWNPRPESENENCRVVEDMESAAQANQRRMNADPLEVMLLNMGYRITGLSSRGAEGSDE
DDSSEGQVQCRSS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgctgtgagaccatgtcgctgcggaacgtcactagtgatcttctgcacaggcag
atcagggagaagagagcgctggacttccagagacactatcatgtgaccgacccgtttata
aagcgtctggggctggaggctgaactacagggtcactctggctgtgtcaactgtctggag
tggaatgagaaaggagatctcctagcctcaggttcagatgatcagcatgccatcatctgg
gatcccttccggcacaaaaagctcatcactatgcacacaggacatgcagctaacatcttc
tcagtcaagttcctccctcactccgaagaccgaatcttgatcacaggagccgccgatacc
aaggtgcacgtgcacgacttgacggcgaaggagaccattcacatgttctcagaccacact
aaccgcgtcaaacggatcgcaacggctcccatgtggcccaacaccttctggagcgcggct
gaggatggcatcattaggcagtatgatctgagagagagcagtaaacgctcggaggtttta
attgatctgacggagtattgcgggcagcttgtggaagcaaaatgtctggcgatcaaccct
cgtgacaacaactacatggctgtgggagctaacgggccttttgttcggctctatgacatt
agaatgatccacaatcacaggaagtctatgagtcaaagtacctcggctggtgttcacacg
ttttgcgacaaacggaaatcgataccggatggtgccggacagtactatgtcgcaggtcac
ttacctgtgaagcttcctgactataataacagattgcgagttctggtggcaacctatgtt
acattcagcccagacggtactgagctgctggtaaacatgggtggagaacaggtgtattta
tttgatctgacgttcaaacagagaccgtacacttttctgctgcccaaaaagtgccatcca
tcatcagaggtgcaaaatgggaaaaccaccaacggtgtgtccaatgggattcatttacct
gcaagccgccttaaactggctaaacttaccagtggctctaatgatcttcctcctcatctg
gagaggatcaagcaacaggctaatgatgcgttcgcgcggcagcagtggactcaagccatt
cagctctacagtctgggcctccatgaagccagtcaaaatgctatgctgtacggaaaccgt
gctgctgcatacatgaagcgaaaatgggatggtgatcactatgacgcacttcgagactgt
cttaaggccttgtccctgaacccaggccacctgaaggcgcacttccgtttagcacgctgc
ctctttgagctcaagtacatcgctgaggctctggagtgtctagatgacttcaagggcaag
tttccagagcaggcacacagcagcgcttgtgacgccctcgacaaagacatcaaggctgcc
ctcttctcaaaaacagaatcctctgacgacaaaaaggggaacagctccatccgcttgcat
aatttcagccggaaagagtccatcccggaggatgagatcgttctcagagagcgaagcttc
gactacaagcatcgctactgtggccactgcaatacgaccactgacattaaggaagcaaac
ttctttggaagtaaaggacagtacattgtaagcggttcagatgatgggtcgtttttcatc
tgggagaaagagacaacgaacctggtgcggatcttacagggggacgagtctatagtgaac
tgcctacagccgcaccccagctactgcttcctggccaccagcggtatcgatcccgtggtg
cgactgtggaacccaagaccggagtcggagaatgagaactgtcgggtggtggaggacatg
gagagtgcggcccaagccaaccaacggcgcatgaatgcggatccgctggaggtgatgctg
ttgaacatgggctaccgcatcacaggcctgagcagcagaggagccgagggctcggacgaa
gacgacagctcggagggccaggttcagtgccgctctagctag
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