Megalobrama amblycephala (Wuchang bream): 125242879
Help
Entry
125242879 CDS
T08212
Symbol
cicb
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125242879 (cicb)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125242879 (cicb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Tudor_5
Fer4_11
Motif
Other DBs
NCBI-GeneID:
125242879
NCBI-ProteinID:
XP_048007896
LinkDB
All DBs
Position
LG13:complement(19367196..19415136)
Genome browser
AA seq
2635 aa
AA seq
DB search
MRPPKKQRGRSPLSTRAKGARKRGGKPEGHSQTTPPAPSHQKYTPSKEDSSQDKHINSSN
ISNSEGLNKQIRERTMETSKSEENAVILNKAKSPRNINANNLTDNTDSIKIASNAHENLH
SNSTDICNTNTQDFTSTNSKGSNQHANSAPSNTQNTNNTANSLNKSNSFSANHTSTTPSS
RKTATFKARVPKKKYMYEHQASSTSPISSIPVAQLALHSNHSNHLCSPHNSISQSTTPVV
RDDLVKADSDLDNSENSRREIGKIASTEAPKGDRTKGDMLKSEMPSEREKVIQGVEIDGY
GEQAPNSVRSSSTDTASEHSVDLEVPEPSCVQLNTGNHVRRFNLSNNSTLSVLLSPNHTQ
TEQRGSATIAEALAKGLKNQRVLARRRPRRTLKEDKKLIKECVFICGVVRGSSREQLNVE
LQINGEGTLLSYPFHTLVSRPHQPIDLILDAPPPGNELVEVGTRVCVPYGGDNDRECYRE
GVVAQVDSHSACPYMVLLQEELDQKKERCSNEETQQTSSTQTVCVARQNLRLLVPPWDGV
MREKEREEREHREEIEVERELCQLSEGMDLVTASTPRDNCRFPSPHTGVHHYGSTHLSSS
TSPAVVMVANNMFTLAARTEDEGTGNRARVREREHERKQLQTPEVDMEVLRLNMAPLRDG
GGHLVSGGPKTCAPNQHRQIFSKPPGYPSPITVVRGISGTSLGSPQPTPSPAILGSDGGI
SHPMPPSVPPSPSSRGSLTPLEKTPTPSQTSTPIPGSSASSSASSSRSRTPLSAAQQKYK
KGDVVCTPNGIRKKFNGKQWRRLCSREGCMKESQRRGYCSRHLSMRTKEMEGAVGERGSG
GGGESSSGTVTPSDLRGRASSEFDWDETSRDSSETSSRGTDSRPRLGLPSLISQDYSRFD
FDECEAATMLVSLGSRSVTPSYSPISNQSPFSPTPSPSASPLFGFHPANFSPITASPVLP
PRRHKHPSGTNSGVPKHGTGGTEREKDRHLSGIVPSFHTSLTFTVPMSPGKRRTDAPPPP
TPLSQEYAKPDQEQSCRDSSLVTNLCIISPQTTTVTHPQRLPSTTASSPPASPLSLESGS
QSTVSQQPLRDSPVIVRNPEVPLIKFTELPLARVAAVDRTNSTENSQTGVHPETGLQVPV
PINAASTNGSVLLQNPTSTLVLVSTTSSIPNPTPAGLPTQSSATLACISVPSPVPGPGLI
GAGDGGGQDKSAPVTLQQPVPCHPAPTALLPLILPTETLHPVPCKDIIMGRPGTVWTNVE
PRSVPVFPWHSLVPFLAPTQSDPSAQPGEGQQTVSHPQTASLKKESQSGSVLKEIIEGAH
NPSSRPTPSADELPPEREKDAERERPDSETESDVDDPFFPGVLPDPPISASPGKRRSQSL
SALPKDDKSSPGKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYAL
GPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEGRGVPGGKDIRERSMSETTEP
PSVSMGMELKGVGPGMVSVSERGGGEGHGQLPRPRAFSQSAMHNLERSERGNPQALAELA
QMCGDGGQVAGRGALSQTQRGVSEDMTSDDERMVICEEEGDDDVIEDSYPGSSIDLKCKE
RVTDSDSENGSGDEGERKRVFAPVICSSSYGPGHGRSVSLSSYPTSRRFSDTSSKRKRTM
EGGDGERREGEGGVSQSSGGQSILVSSGGGVSSVLGAVRVASTVVTNVVRPVVSTPVPIA
SKSPHDRKPALPQTQLLIGPGATGNTATASAGGGGYYSSSSPNPVSASAGQGGLVTNLVL
GGTFQAPPTVQLVTPPPPQNPASPASAPLTHSNGPLPLPMLQSHILPSASLAPSSGQKPI
TQVQYILPTLSANNPKSPSPQQASQPTSIFTLPTALPTHASLANGKQSGYVSSPAVGVVS
PGARVQTQSPVLQGKMLVPMATVRAAPAPSQQFPLVAPPLPVQNGAQAGSKIIQIAPMPV
VQSQLPSTGPVQPGSPFSVTMGTATVVAPGSTPSQTVLLPPPPTRITYVQSTPGVPSPLP
LVSTTTGSSSQTVSAAPGSAYVQSPLATFAAIAHPGQTLVQPLIAGQPSLLAPAQSPSAP
HAPAMTAIYTPTNVTLATGVVSMATVSPSVVYTVSSSSGLSSHILPKHTTTNSMTSVTSD
RQGNVSSHSERQLHQERTLDRQHTDSPGYTQSSERQTEKVSLLQPDKQFQVPSKGGSSSV
VPPQGTSVPLQPGSPAQPSHSGSAPGTPKLITARPPQKVKATVANIPVGSYDGGGRGKER
DKERDREKEREREKDKESGSRFSFEIDKAAETSSPAALPPEEGSTEAPTHSVAESGTHSG
RGKEANAKEAEWKDSHPSSPLPPPSGSDPAPTQSHGDKDAPPKKVKARPPPLKRPFDSVD
KVLSEVYFEERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTGENLDSSTE
DPISPKRKSRRRSSCSSEPNTPKSAAKCEGDIFTFDRPDGEDILGELEFDKVPYSSLRRT
LDQRRALVMQLFQEHGFFPSAQSTAAFQARYADIFPTKVCLQLKIREVRQKIMQTAAPSE
SAGISDLSSLPGPSGAAASDIAVGVDPQEKEAEREGEQNSPDDPRNAGDSQDSTR
NT seq
7908 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaccaaagaaacagagaggacgctctcctttatcgacaagagcaaaaggagca
agaaaacgagggggcaagcctgaaggacattcacaaacaacaccacctgcaccttcacat
cagaaatacactccatccaaagaagatagctctcaggacaagcatatcaacagtagcaac
atatcaaacagtgaggggttaaataagcaaataagagaaaggacaatggaaacatccaaa
tctgaagaaaatgcagtaattctgaataaagcaaaaagccccaggaacattaacgctaac
aatttaacagataatacagactcaatcaagatagccagcaacgcacatgaaaatttacac
agtaatagcacagacatctgtaacacaaacacacaagactttactagcacaaacagtaaa
ggtagcaaccaacatgcaaacagcgctcctagcaatacacaaaacacaaataatacagcc
aacagtttaaataaaagcaactctttcagtgccaaccacacttccaccacaccctccagt
cgaaaaacagccactttcaaagccagggtgcccaagaagaaatacatgtatgaacatcaa
gcttccagtacatctcccatcagttcgatccctgtagcccaactcgctcttcatagcaat
cacagcaatcatctatgttctccacacaactcaatttctcagagcactactcccgtggtc
agagatgatttggttaaagcagattctgatctggacaatagtgagaatagtaggagagaa
ataggtaaaatagcaagcacagaagctccaaaaggagatagaactaagggtgatatgttg
aaaagtgagatgccttctgaaagagaaaaggtgatccaaggagtggaaatagatggatat
ggggagcaagccccaaattctgtgcgctcatcatccacagacacagccagtgaacattca
gtggatctggaagtacctgagccctcttgtgtgcagctaaatacaggtaaccacgtaaga
agattcaacctgtccaacaattcaaccctgtctgtcctcctgtcccccaatcacacacaa
actgagcagagagggtctgcaacaatagcagaagcactagctaaaggactgaaaaaccaa
agggtgctagcacgtagacgaccaagaagaactttaaaggaagacaagaagctgatcaag
gaatgtgtatttatttgtggtgtggtgcgtgggtccagtagagagcagctgaatgtagag
ttgcagattaatggggaggggacactgctctcatatccatttcatactttagtaagtcgt
ccacaccaacccattgacctcattttagacgccccacccccaggaaatgaacttgtggag
gttgggacgcgtgtttgtgtgccttatggaggagataatgatagggagtgctacagagaa
ggtgtggttgctcaggtagactctcattcagcttgcccctacatggtgcttttgcaggag
gagttggaccagaagaaggagaggtgtagcaatgaggagacgcaacagacatcaagtaca
cagactgtatgcgttgcccgccagaacttgcgtctccttgttccgccatgggatggggtt
atgagagagaaagaacgagaggagagagagcacagagaggagatagaagtggagagggaa
ctatgtcagttaagtgagggaatggatttggtaactgcaagtactcccagggacaactgc
agatttccatccccacacacaggggttcatcactatggaagcacacatctttcatcttcc
acttcaccagcagttgtgatggtagcaaacaatatgtttactttagcagctaggacggag
gatgagggaactgggaatagggcaagagttagagaaagagaacatgagagaaagcaattg
cagactccagaggtggacatggaggttttgcggcttaacatggcaccactcagagatggt
ggaggacacttagtctcagggggaccaaaaacatgtgcacctaatcagcacagacaaatt
ttctccaaacctcctgggtatccaagtcccattacagtggtgcgaggcatctctgggaca
tctttaggaagtccacagccaaccccttcacctgcaattttagggtctgatggagggatc
tctcaccctatgccaccctctgtgcctccttcccccagctctaggggttctctgacacct
ctagaaaagactcctacaccttcacagacctccaccccaataccagggagttctgcctct
tcttctgcttcttcctcaagatcaaggacacctttgtcagctgcccaacagaaatacaag
aaaggcgatgttgtttgtacacctaatggaatccgtaagaagttcaatggaaagcagtgg
cggcgtctgtgctcacgagaaggctgcatgaaagagtcccaacgtcgtggctactgttct
cgtcacctctccatgcgtaccaaagaaatggagggagcagtgggagagagagggagtgga
ggaggtggagagagtagctcagggaccgtgaccccttcagatctgcggggtcgtgctagc
agtgaatttgattgggatgagacttctcgtgacagtagtgagacaagcagccgaggtact
gactctcgcccacgtcttggcttgccatcactgatttctcaagattactctcgttttgac
tttgatgaatgtgaggctgcaactatgctggtatctctgggctcaaggtctgtaacaccc
tcatactcaccaatttcaaatcagtccccattctcacctacaccttccccatcagcatca
ccactttttggctttcaccctgcaaatttcagtcctattactgcctctccagtcttgcct
cctcgccgccacaaacacccaagtggtaccaacagtggtgtcccaaaacatggaacagga
ggcacagagagggagaaagacagacacttgtctggtattgtgccatccttccacaccagt
ctaaccttcactgtacctatgagcccaggcaaacgcaggacggatgccccacctccccca
actccattgtcacaggaatatgccaaacctgatcaggaacaaagctgtcgtgactcttcc
cttgtaacaaatctctgcattatctctcctcagaccactactgtcacacacccccaaaga
ctgccttcaaccactgcctcttccccaccagcttctcccctaagcttagaatcaggttca
caatctacagtgtcccagcagcctttgagagactctccagtaatagtgagaaatcctgag
gttcctttaataaagtttacagaactcccactggctagagttgcagcggtggacaggacc
aattccacagaaaatagccaaactggtgtacatccagagacaggactacaggttcctgtt
ccaattaacgctgcttccactaatggatctgtcttactgcagaatcccacctcaactctt
gttctagtgtctactacctcttccattccaaacccaacccctgcaggtctacctacgcaa
tccagcgccactttagcctgcatatcagtgcctagccctgtcccagggcctggtctcatt
ggtgcgggtgatggagggggacaagataagagtgccccagtgacgctgcagcagcctgtc
ccttgtcatcctgctcctactgccctgctgccgctcatacttcccacagagaccttgcat
cctgtgccatgcaaagacatcataatgggccgacctggaactgtgtggactaatgttgag
cccagatcggttccagtgtttccttggcattcattggtccctttcctggcacccacccaa
tcagatccatcggctcaacctggtgagggccaacaaactgtcagtcatccccagacagct
tctctgaagaaagagtctcagagcgggtcagtgctgaaggagattatagagggagcacat
aacccttcctcacgccccactccctccgctgatgaactgcccccggagagagagaaggat
gcggagcgagagagacctgacagtgaaacagaaagtgacgtggatgatccgtttttcccc
ggtgttcttcctgatccgccaatttctgcgtctcctggaaagcgtagatctcagtccctc
agtgcactgcccaaagatgacaaatccagtcctggcaagagggagaaagaccacatccgg
agacccatgaacgcatttatgatcttcagcaagcggcaccgtgcactggttcaccagaga
cacccaaaccaggacaaccgcaccgtcagtaaaatacttggagagtggtggtatgccttg
gggcccaaagaaaaacaaaaataccacgacctcgcatttcaggtgaaggaggcacacttt
aaggcacatcctgactggaaatggtgtaataaagacagaaagaaatccagcagcgaggga
cgtggtgttccagggggcaaagacatccgcgagaggagcatgtcagaaaccacagaacct
ccgtctgtgtcaatggggatggagctcaaaggtgtggggcccggcatggtgagcgtatca
gagcgaggcggaggtgagggacatggtcaattgcctcgtcctcgtgccttctctcagagc
gccatgcacaatctggagaggagcgagagaggcaatccacaggcactcgctgagctggca
cagatgtgtggggatggtggtcaggttgcagggcggggtgctctctctcagacgcagagg
ggggtaagtgaggacatgacaagcgacgatgagcgtatggtcatctgtgaagaagagggg
gatgatgacgtcattgaggactcatatccgggtagctccattgacctgaagtgtaaggag
agggtgacagacagtgacagtgaaaatggatctggagatgaaggagaacgcaagagagtt
tttgctccagtgatttgctcctcgtcttacggccctggtcacggtcggagcgtgtctctc
tcctcctaccccacttctagacgctttagtgacacttcctcaaaaagaaaacgaacaatg
gagggaggtgatggagagcgaagggaaggtgaaggaggtgtgtcccagtcatctggaggt
cagtccatcctggtcagttctggcgggggagtgtcgtcagttctaggagctgtgagagtt
gcgtccactgtcgtcactaatgtggtgcgtcctgtggtcagcacaccagtgccgatcgcc
agcaagtccccacatgacaggaaacccgctcttccccagacacagcttctcatcggccct
ggtgccacaggaaacacagcaacagcttcagctggagggggtgggtactattcctcatca
tcgcccaatcccgttagtgcatcagcaggtcaaggggggctggtgaccaatctagttttg
ggaggcacattccaggctccacccactgtacagcttgtcacacctcctcctccacaaaac
ccagcctccccagcatctgccccacttactcatagtaacggtccgttgcctctgcccatg
ctgcagtcgcacattctcccctccgcctcattagcgccctcgtcaggccagaaaccgata
acacaggtccagtacattctccctaccctctctgccaacaatcccaagagcccctctcct
cagcaggccagtcagccaaccagtatcttcaccctacccacagctctgcccactcacgcc
tcactggccaacgggaagcagtcggggtacgtctccagtcctgctgtgggagtggttagc
ccaggagccagagtgcaaacacagtcaccagtcttgcagggcaagatgctggttcccatg
gcaacagtgagggctgctcctgccccctctcagcagtttcccttggtagcccctcctctt
cctgttcagaatggagcacaggcaggaagcaagattattcagattgctccgatgcctgtc
gtccagtcgcaactcccctctacgggaccagtgcaacctgggagccctttttctgttact
atgggaacagctacagtggtcgccccaggctctaccccgtctcaaactgtgctgctaccg
cccccaccaacaagaatcacttatgtacagtccactcctggggttccttctcctttgcca
ttagtttccaccacaacaggctcctcttctcagacagtttcagcagcacctggatctgct
tatgtgcaatcacccttggcgacctttgcagcgatcgctcatccaggacaaactttggtg
cagccactgattgcaggtcagccatcgctgctggccccagcacagtctcccagcgcccct
cacgctcctgccatgaccgccatctacacccctacaaatgtgaccttggcaactggtgtg
gtgtctatggcgacagtgtcaccaagtgtggtgtacacagtgtccagttcctctggccta
tcttcacacatccttcctaaacacaccacaacaaactccatgacctctgtaacctcggat
aggcaggggaacgtatcttcacattctgagagacagttgcaccaggagagaacactggac
cggcagcacacggacagtccgggctacacgcagtcctctgagagacagacagagaaagtc
tctctcttacagccagacaaacagttccaggtgccgagtaagggcggtagcagctcagtt
gtgcctccacagggcacctcagtgccactgcagcctggaagccctgctcaaccctcacat
tctggcagtgctccggggacacccaaactgatcacagcaaggcctcctcagaaagtgaaa
gccacagtggccaacatccctgtgggcagttatgatggaggagggagaggcaaagaacga
gacaaggagagggacagggaaaaagagagagagcgagagaaggacaaagagagtggtagt
cggttctcatttgagatagacaaggcagctgagacgagttccccagcagcgcttccacca
gaggaggggtcaactgaagcccccactcactctgtagcggaaagtggtacccatagtgga
cgtggcaaagaagcaaatgctaaggaggctgaatggaaggactcccacccttcttctcca
ttacctcctccctctggatcagatcctgccccaactcagtctcatggtgataaagatgcg
ccacctaaaaaagtcaaggcccgccccccaccactcaaacgaccatttgattctgttgac
aaggtcctgtcagaggtgtactttgaggagcgcttcgcagagcttccagagttccgtcca
gaggaggtgctgccctctccaaccctgcagagtctggccacctccccacgagccatactg
ggcagctaccgcaggaagaggaaaaactccaccggtgagaacctggactcgtccacagaa
gatcctatctctccaaaaaggaaaagccgccgcagatctagctgcagttcagagcccaac
acacctaaaagcgctgcaaagtgtgagggggacattttcacctttgataggccagatgga
gaggatatactgggggagctggagtttgataaggtgccctactcctctctcaggcgaact
cttgatcagaggagagctcttgtcatgcagctattccaggaacatggcttcttcccttca
gctcaatctactgctgcgttccaggcacgatacgctgatatcttccccacaaaagtgtgc
ttacagctcaaaatccgtgaggtccggcaaaagatcatgcaaacggcagctccatcggaa
tcggccggcatttcagatctttcctcgttaccgggaccttctggggcggcagccagtgac
atagctgtaggcgtggaccctcaggaaaaagaggccgagcgagagggtgagcagaacagc
ccagacgatcccagaaacgctggcgattcacaggactccaccagatga
DBGET
integrated database retrieval system
