Megalobrama amblycephala (Wuchang bream): 125242954
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Entry
125242954 CDS
T08212
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mamb01001
]
125242954 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125242954 (prpf4bb)
Enzymes [BR:
mamb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125242954 (prpf4bb)
Protein kinases [BR:
mamb01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
125242954 (prpf4bb)
Spliceosome [BR:
mamb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125242954 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
CSTF_C
Motif
Other DBs
NCBI-GeneID:
125242954
NCBI-ProteinID:
XP_048008051
LinkDB
All DBs
Position
LG13:complement(6827949..6855425)
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AA seq
1021 aa
AA seq
DB search
MADVEMDLRSKRLNNGSEDLESPEKSGNEDENGEMSGEDEEEGEEEAEVNGEKQESCSKH
HSSSGSKHKKKKHKHRSKHKKHKHASEEDKDRKRKHRHKHKKHRRKEEPSSLPSGAINRR
AEDGSPSLGNAALDDKALLEDLEKQRALIKAELDSQLMEGKVQSGMGLILQGYNSGSEED
GEGQRARNGEQRQRGHGARTRSPKDQISRGGRSRRDSTDTSKPIAKRRSRSRSRERAGRD
AKLERTTKSAKETVKEHSKSKEKKRSRSRDKSKERGRRSQSPSTRRCSAERKPDQKGHSD
RRSSPRTEEKREQARQRSGSQGRKSRSQDRRSHSKDARLGRSETDREKRPGKSPSKDTSS
GKENRSPHQRRALSPQRRRSSSPRHRDRQSNQPPSGSADRSSKLSHSPSRNRSPARRARS
RSNERRRDSPSRKRPRVDGIGRSRETSPARRRMSRSPLRRRSVSPRRQSRSSPRRRSRSP
LRRRSADRDRFGRSRLRRSTSRDRERRRRRRSRDEDKFKGSLSEGMKADQDSSSEEVMED
FDAEEEDEEALIEQRRQQRLAIVQKYKAVNEDSNMGSMASEPSSPQSSTRSRSPSPDDIL
ERVAADVKEYERENVNTFEANIKAKHNLIAQEKEGANPKKPSAPDMFTESDDMFAADFDS
ARLRAAGIGKDFKENPNLRDNWTDAEGYYRVNIGEILEKRYDVYGYTGQGVFSNVVRARD
TARAGQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLV
FEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNES
KTILKLCDFGSASHVADNEITPYLVSRFYRAPEIVIGKPYDYGIDMWSVGCTLYELYTGK
ILFPGSSNNHMLKLAMDVKGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDKVTEREKVTVM
STINPTKDLLADMIGGQRLPEDQRKKVMQLKDLLDGTLMLDPAKRISINQALQHPFIQEK
I
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtggaaatggatttacggagcaagaggctgaataacgggtcagaggatttg
gagagtccagagaagagcgggaatgaggatgaaaatggtgaaatgtctggagaggatgaa
gaggagggtgaggaggaagcagaggtgaatggagaaaagcaagagagctgttctaaacat
cacagcagcagcggcagcaaacacaagaaaaagaaacacaagcaccgtagcaagcacaaa
aaacacaaacatgcatctgaggaagataaggaccgcaaacggaaacatagacacaaacat
aagaagcacagacgcaaagaggagccgtcctctttgccgtctggggccatcaacagaagg
gctgaggatggctccccttctctgggcaatgcagccctggatgacaaggcccttcttgaa
gatctggagaaacaaagagcactgattaaagctgagctggacagccagctgatggagggg
aaagttcagtcaggaatgggcctaattctacagggttacaattctggctctgaagaggat
ggagagggacagagggcacgtaacggggaacaacggcaaagaggtcacggggccagaacc
cgctcgcccaaagaccagattagcagggggggtagatcccgacgggactcaacagacacc
agcaaaccaatcgctaaacgacgcagtcgcagccgttcccgagagagagccgggagagac
gctaagcttgaacgaacgaccaaaagtgcaaaagagacagttaaggagcatagcaagtca
aaagagaaaaaacgctcccggagcagggacaaatccaaggagcgcgggaggaggtcccag
tccccatctacgagaagatgctctgcagagagaaaaccagaccagaagggacattctgat
cgccgttcttctcctcgtactgaagagaagcgggaacaagccaggcagagatcaggctca
caagggcgcaagagccggtcgcaagatcgacgatctcattcgaaagatgcccggttgggt
cgatcagaaactgacagagaaaagaggccaggaaagtctccatccaaagacacgtcttct
gggaaagagaatcggtcgcctcatcaacgacgagctcttagccctcaacgccgacgcagt
tcctctcctcgccacagggaccgccagtccaaccagcccccctcgggttctgcggaccgg
agctctaaactgagccactcgccgtctaggaacagatcaccagccaggagagcacgaagc
cgctcgaatgagcgccggagagattccccttccaggaagcgtcctcgtgtggatggaatt
gggagatcgcgggaaacgagtccagctcggcgcagaatgagccgctcaccactcagacgt
aggtctgtatcaccacggagacaatctcgctcctcccccagaaggcgaagtcgatcaccc
ctgagacgcagatctgctgatagggatcggtttggccgttccagactgcgacgatcaact
tccagagatcgcgagaggaggaggaggaggcgaagccgagatgaagacaagtttaaaggc
agtctgtcagagggtatgaaagcagaccaagactcctcctctgaagaagtgatggaagat
tttgatgcagaagaggaggatgaagaggctctgattgagcagcgacgacaacagcggctt
gcaatcgtacagaaatataaagcagtaaatgaggacagtaatatgggctccatggcatca
gagcctagcagtcctcagagtagcacccgcagtcgttcaccctcccctgatgacatcctg
gaacgggtagcggccgacgtgaaggaatacgagcgagagaatgtaaacacttttgaggcc
aacatcaaggccaagcacaacctcatcgctcaggagaaagaaggagccaacccaaagaag
ccctcagcacctgacatgttcactgagtcagatgacatgtttgctgcagattttgacagt
gccagactcagggctgcaggcattggtaaagactttaaggagaaccccaacctcagggac
aactggactgatgcagaaggatactaccgtgtgaacatcggtgagatactggaaaagcgg
tatgatgtgtatgggtacactggacagggtgtgttcagtaatgtggtcagagctagagac
actgcccgggctggccaggaggtggcagtcaagatcatccgaaacaatgaactcatgcag
aaaacgggactgaaggagcttgagtttctgaagaagctgaatgatgcagatcctgacgat
aaatttcattgtttgcgtctcttcagacacttttaccacaaacagcatctctgtttggtg
tttgaacctctcagtatgaatctgcgggaagtgctgaagaagtatggtaaagacgtaggg
ctacatatcaaggcagtgcggtcctacagtcagcagctctttctggccctcaaactactg
aaacgctgcaacatccttcacgctgacatcaaaccagacaacatattggtaaatgagtca
aagaccattcttaaactctgtgatttcggctctgcgtctcatgtcgccgacaatgaaatc
actccctacttagtcagcagattctatagggcacctgaaattgtcattggtaaaccatat
gattatggcattgatatgtggtcagtcggctgtaccctgtatgagctgtacacaggtaag
atcctgttccctggctcctccaacaaccacatgctgaaactggccatggatgtgaagggc
aagatgcctaacaagatgatccggaaaggcttgtttaaagaccaacattttgaccagaac
ttgaacttcctgtacatagaggtagacaaagtgactgaaagggagaaggtaactgtgatg
agcactattaaccccactaaagacctgcttgcggacatgatcggaggtcagaggttacct
gaggatcaaaggaaaaaggtcatgcagctgaaggatctgttggatgggactctgatgctg
gaccctgctaaacgcatcagcatcaaccaggccctgcagcaccctttcattcaggagaag
atatga
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