Megalobrama amblycephala (Wuchang bream): 125243009
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Entry
125243009 CDS
T08212
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mamb00535
]
125243009 (col14a1a)
Proteoglycans [BR:
mamb00535
]
Extracellular matrix (ECM) proteoglycans
Others
125243009 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Fn3_VIN3
Pur_ac_phosph_N
Fn3_Dep-1_2nd
VWA_3
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
125243009
NCBI-ProteinID:
XP_048008155
LinkDB
All DBs
Position
LG13:complement(17221812..17390742)
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AA seq
1876 aa
AA seq
DB search
MQVSGSRIKLWCPLISLALIQFFAPVSAQVPVPRRLRFKVLSAGKLLVSWKEPKGEYDGY
KFIYNTEPGGETSELQIARGENKAIIKDFNPRKEYSVKVIAVSGNLHSRALQGKYTAEDQ
SSDGDTTQLQKLKEAGPVEEGNEISGVDQFVCTTPAIADIVILVDGSWSIGRINFRLVRM
FLENLVNAFDVGIDKTRIGLAQYSGDPRIEWHLNGFSTKDAVIDAVKNLPYKGGNTLTGL
ALTYILENSFKPESGARADVPKIGILITDGKSQDDVIPPAQSLRSSGVELFAIGVKNADE
NELKAIASEPEDTHVYNVADFSIMSTIVDGLTRKVCDGVEQQDKEINRDSSTEETVSPPQ
DLVISEVTAHSFRVSWTHAPGSVEKYRVVYHPTRADILEEIAVGGTENSVVLQNLNSLTE
YEIAVFAVYRSAASDALRGNEITLALPTVSDLELYEVTENSMRARWRDAEGASGYMILYA
PLSSETTDERELKVDETVTDVELKGLIPDTEYTVTVYAMFGEEASDPVTVQETTISLRPP
RNLRVTEVDHSSVRLNWDAVSNKVKGYRVLYIKTDGVQTNEVELGPVTNVYLKNLSPLTE
YTVAVFALYDSGQSEALSGGFTTKLVPAPFSLMTSEVTSESFRVSWSHPARDVVLYKMAW
SPTGGGDEMEMMLNGAVDSYVIQDLSPFTEYKVSLSAIYKEETESNAVVVLENTLDWTTE
VPTTIPSTTAIVHLGLTNLWVDEETHFSMQVNWEVLDSDVEQYKVTYVSADRTEETVLVS
GNRRSVILQPLLSDTRYKITVTPIYADEESTALSMSSSGKTMPLSGPSNLRVSDEWYNRF
RISWDGPQFPTMGYRVIYQPISVSGPALETFVGDDVNTLLILNLLSDTEYSVQVIASYTT
GSSQPLTTKGKTLFLGVSNLSTKQVLSTSMCAQWQPHHHASLYRVVIESLLNGQKQESRV
GGGASRECFFNLSPNTQYKISVYTLSQDTEGPAVTTMATTAPAPTQPPTAPPTTIPPPTI
PPAKEVCKAAKADLAFLVDGSWSIGDDNFQKIIRFLYSTTGALDVIGPEGTQVAIAQFSD
DARTEFKLNSYSDKEALLDAVQRITYKGGNTKTGRAIKHVKEAIFTEDAGVRRGIPKVLV
VLTDGRSQDDVNKISKEMQMEGYIIFAIGFADADYGELVNIASKPSERHVFFVDDLDAFK
KIEEQLITFVCEAATATCPSVLMSGNTLAGFRMMEMFGLVEKHYSSVQGVSMEPGTFNSF
PCYRLHKDALVSQPTRYLHPEGLPSDYTISMLFRILPETPQEPFALWEILDKNNEPLVGI
ILDNGGKTLTFFNYDYKGEFQTVTFEGTEIKKIFYGSFHKLHVAISKTAAKVVIDCKTVG
EKSINAAGNITIDGVEVLGRMVRSRGSRENSAPFQLQMFDIVCSISWASRDKCCELPGLR
VEEDCPAMPHACTCAQDSKGPPGPSGPPGGPGIRGSRGDRGEPGLTETAGHSHFVSAARL
VGPQGPPGEMGPSGPQGPPGPQGPNGLSIQGAPGAPGEKGEKGEIGLPGPQGVPGASGGP
GRDGPPGQRGLPGKDGPQGRLGPPGPMGGPGAPGAPGSSGPPGQIGDQGLPGPPGTKGER
GERGDMQSQAAVRAIARQVCEQLIQSHLSRYNSILNQIPSQSVSVRTVQGPPGEAGRPGP
PGPQGEQGPSGRPGFPGASGQNGRPGERGLPGERGEKGNPGIGTQGPRGPPGPPGPPGEG
RTGSQGPPGRPGIQGTSGRPGTPGSPGAAGPPGYCDQNSCLGYNVGVQQLPSNPYQNYGP
ATNYDDEEDDEDPYRGYRAYPPQYYQPSYPDPHASRLGPAHPGDTVGMRSPGTRRFSRST
AEDGSIGESEVQVTAE
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgtcgggatcgaggattaagctgtggtgtccgcttatctcgctggcactgatt
cagtttttcgcccctgtttctgctcaagttccagtcccaagaagacttcgatttaaagtt
ctgagtgcaggcaagctacttgtctcatggaaagaaccaaaaggagaatatgatggctac
aaatttatatataatactgaaccaggtggggaaacaagtgagttgcaaattgcaagggga
gagaataaagcaataataaaggattttaatcccaggaaggagtattcagtcaaggttata
gctgtgagtggaaacctgcacagccgagcacttcagggaaaatatactgcagaagaccag
agcagtgatggagacactactcaacttcaaaaactgaaagaagctggacctgtggaagag
ggcaatgagatctcaggagtggatcagtttgtctgcacaactcctgccatcgcagatatt
gtcatcctggttgatggatcttggagtattggaagaatcaatttccgtctggttcgcatg
ttccttgaaaacctggtcaatgccttcgatgtgggaatagacaaaacccggattggactg
gcccagtacagcggagatccaagaattgagtggcacttgaatggcttcagcacaaaagat
gcagtaatagatgctgtcaaaaacctgccttacaagggaggtaacactctcacaggtctt
gctcttacctacatcctggagaacagcttcaaacctgagtctggggctcgtgccgatgtt
cccaaaattggaatcctgataaccgacggcaaatcccaggatgacgttatcccacctgct
cagagtctgagaagttctggagtcgagttatttgccattggtgtgaagaatgctgatgag
aatgagctgaaggccatcgcctctgaaccagaggacacacacgtttataacgtggctgac
tttagtatcatgagcaccatagtggatggtctgaccaggaaggtgtgtgatggagtggag
caacaggacaaagaaattaaccgagattcttccactgaagagactgtgtccccaccccag
gacttggtcatttctgaggtgactgcacacagttttcgtgtgtcctggactcatgcacct
ggaagtgtggaaaaatatcgggtggtttaccatccaaccagagcagacattctggaagag
attgcggtgggcggcacagagaattcagttgtcctgcagaatttgaactctctgactgaa
tacgagattgctgtgttcgctgtgtaccgcagcgcagcgagtgacgctctcagaggaaac
gagatcacactggctctacccacagtgagtgatctcgagctgtacgaagtgacagaaaac
agcatgagagcccgctggagggatgcagagggggcttctgggtacatgatcctttacgct
ccactgagcagtgagactacagatgaaagagagctaaaggtggatgagacggtgactgat
gtggaactgaagggattgattcctgacacagagtacaccgttacggtctatgccatgttc
ggagaggaggccagtgatcctgttactgttcaggagaccaccatatccctgagacctcca
cgcaacctgcgggtcactgaagttgaccacagctctgtccgactcaactgggatgcagtg
tccaataaagttaagggctaccgtgtcttgtatatcaagacagatggtgtccagaccaat
gaggtggagttgggtcccgtcaccaatgtgtacctgaagaacctgtcacccttaacagag
tacacagttgctgtttttgctctctacgacagcggccaatcagaggctctcagtggcgga
ttcactacaaagcttgtgccagccccttttagcctgatgacatcagaggtcacctcagag
agtttccgggtgagctggtcacatcctgccagggatgtggtgctttataagatggcctgg
tcaccaactggaggaggagacgagatggagatgatgctgaatggagctgtggactcatat
gtaattcaagacctgagtccttttacagagtataaggtgtcactgtcagccatctacaaa
gaagaaacggagagcaacgctgtggttgtgcttgagaatacattggactggaccacagaa
gttccaaccaccattccctccactacagcaattgttcatctgggattgactaacctatgg
gtggacgaggagacccacttcagtatgcaagtgaactgggaggtgctggactcagacgtg
gagcagtacaaagtgacatatgtcagcgcagaccgcacagaagagacggtattagtctca
ggaaacagaagaagcgtgatcctgcaaccactcctctcagacacaaggtacaagatcaca
gtgacccctatttatgcagatgaagagtccacggcactatccatgtcctcttccggcaaa
acaatgccactttctggccccagtaacctcagggtgtctgatgaatggtacaatcgtttc
cgcatcagctgggatggacctcagttccccactatgggttacagggtcatctaccagcct
atctctgtgtcaggtccggctctagagacgtttgtaggagatgatgtgaacaccctgctg
atcctcaatctgttgagtgacacggagtacagcgttcaggtcatcgcctcctacaccacc
ggatccagccaacccctcaccaccaagggcaaaacactgttcctgggggtgagcaatctc
agcacaaaacaggtgctcagtaccagcatgtgtgcgcagtggcaacctcaccaccatgcc
tccctctaccgagtcgtcattgagtcactgctcaacggtcagaaacaggaaagtagggtc
ggtggtggtgcatccagagagtgcttctttaacctttccccaaacacccagtacaagatc
agcgtctacaccctttcacaggatacagagggccctgccgtcaccaccatggcaaccact
gctccagcacccacccagccaccaaccgcaccacccaccacgatccctcctcctaccatc
cccccagccaaagaagtttgcaaagcagccaaggcagacctggccttccttgtagatggc
tcctggagtataggagatgacaactttcagaagattattcgtttcctgtacagcacaact
ggtgcacttgatgtgattggccccgagggaacacaggtggccattgctcagttcagtgat
gatgccagaactgagttcaagctcaactcctatagcgataaagaagctctgctggatgcc
gtacagcgcatcacatacaagggaggaaacaccaagacaggtcgagccattaagcatgtg
aaggaggccatttttactgaggacgcgggcgtacgcaggggcattcctaaagtgctggtg
gtgctcacagacgggcgctctcaggatgatgtcaacaagatctccaaggagatgcagatg
gagggatacatcatctttgccattggcttcgctgatgctgactacggggagctggtgaac
attgccagcaagcctagcgaaagacatgtgttctttgtggacgatctggatgccttcaag
aaaattgaagaacagctcataacttttgtttgtgaggctgcaactgccacttgcccctcg
gtgttaatgagtgggaacactttagctggtttccgtatgatggagatgtttggtttggtt
gagaagcactacagcagtgtgcaaggtgtctcaatggagcctgggactttcaacagcttt
ccctgctaccggttacacaaggacgccctcgtctcccagcctaccaggtatctacatccc
gaaggccttccctccgactacacaatatctatgctctttcgcatactgcctgaaactcct
caggaaccttttgcattgtgggaaatcctcgacaaaaacaatgagccactggtgggcatt
atcctggacaacggagggaaaacattaacctttttcaattacgactacaagggtgaattt
caaacggtgactttcgaaggaactgaaattaagaagattttctatggcagtttccataag
cttcatgtggccatcagcaaaaccgcggctaaagtggtgatcgactgcaaaacggttgga
gagaaatccatcaatgccgcaggtaacatcaccattgatggagtggaggttctgggacgc
atggtccgctcacgtggaagcagagagaactccgcaccgtttcagctccagatgtttgac
atagtctgcagtatatcatgggccagtcgggataagtgctgtgagctcccaggcttgaga
gtagaagaggactgtcctgccatgccccatgcctgcacctgtgctcaggacagcaaaggg
ccacctggaccctcgggaccaccgggcggtcctggtatcagaggttcaagaggagatcgg
ggggagccaggcttgacggagactgcagggcattcacactttgtttcagcagcccggctg
gtggggcctcaagggccacctggcgagatgggaccttcaggaccacaggggccaccgggt
cctcaggggccaaatggactgtccattcagggggcaccgggggctccaggagagaaagga
gagaagggtgaaataggtctgccaggtcctcagggtgtaccaggtgccagtggaggacca
gggcgagatggacctccaggacaaagaggtctaccagggaaagatggaccccagggacga
ctgggccctccaggaccaatgggcggccctggtgctcctggggctccaggatcaagtgga
ccaccagggcaaattggtgatcaggggctacctgggcctcccggcactaaaggcgaacga
ggagagagaggtgacatgcagtctcaggccgctgtccgcgccatagcgcgacaagtttgt
gaacagctcattcagagtcacttgtctcgctacaactctatcctgaaccagattcccagt
cagtctgtttcagtacggacagtacaaggtccaccaggtgaggctggtcggccgggacct
ccggggccacagggagagcagggtccttctggcagaccaggattccctggagccagtggg
caaaatggccgcccaggagagagaggtctccctggagaaaggggagagaagggcaatcca
gggatagggacacaaggtcctcgtggtcctccaggacccccagggcctcctggagaaggt
cggacaggaagtcagggccctccagggagacctggaattcaaggcacctcaggacgtcca
ggcacccctggtagccctggtgctgctggaccccccggctactgtgaccagaactcctgc
ctcgggtacaacgttggagtacaacagttaccctccaacccctaccaaaactacggcccc
gccaccaactacgacgacgaggaggatgacgaggacccttaccgtggctaccgtgcctac
cctcctcagtactaccaacccagctaccctgacccccatgcctccaggcttggccccgcc
caccctggtgacacggtggggatgaggtcacctggcacgcgtcgcttctcccgcagcacg
gccgaagatgggagcatcggtgagtcggaagtacaagtgacggccgaatag
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