Megalobrama amblycephala (Wuchang bream): 125243023
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Entry
125243023 CDS
T08212
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125243023 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125243023 (prpf3)
Spliceosome [BR:
mamb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
125243023 (prpf3)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
Motif
Other DBs
NCBI-GeneID:
125243023
NCBI-ProteinID:
XP_048008180
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Position
LG13:10891449..10921858
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AA seq
733 aa
AA seq
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MSLPKREVDELRPWVERIVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDDSAS
SFVERLFEALEESKNSRGSKGAGEKNRKRELKEVFGDEVEGVKDGHSVDTAVKKKRVPRF
EEVDEPAVLPGPPTESPGMLTKMQIKQMMEAATRQIEERKKQLSIVAPVPTVQSRLIPSQ
TDSSAPRPILPAVGATQSIAPSQAANFMNDAIEKARKAAELQAKIQSTLAMKPGILGALG
NTGPHNLVALANLHAMGIAPPKVEPREITKPTPLILDELGRTVDASGKEIELTHRMPTLK
ANIRAVKREQFRQQLKEKPSDDLESTSYFDPRVALTPAQRAKKGFRFHEQGRFEKIAQRI
RTKAQLEKLQMEIAQAAKKTGIQASTKLALIAPKKELGEGEIPHIEWWDSYILPSHIELS
ACTNLDEVEMHGVTNLVEHPIQMAPPVDTDKPVTLGVYLTKKEQKKLRRQTRREGQKEVQ
EKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLT
AEQRKEKKVKKLKEDLSHGVHIAVYRKETDGMINTFLVLLQQHSTCSHCARIHLQFERIR
NLHNPAKKFKVEANANQLYLTGTVVLHKDVNIVVVEGGPKSQKKFKRLMLNRIKWDEPNS
KRDEPQDSDDEGSRKNNKCTLVWEGTAKERSYGEVKFKQCPTESMAREHFKKHGTEHYWD
LALSQSVLETTDD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcccaagcgtgaggttgatgagctgaggccatgggtggaacgcatagtaaag
aaggtccttggtttttctgaacccactgtggtcacagcagcattacactgtgtgggaaaa
ggcctggacaagagaaaaaccacagaccagctaaggccgtttcttgatgattcggcaagc
agctttgttgagcgtctatttgaagctcttgaggaaagcaaaaactcccgtggcagcaaa
ggagctggagagaagaaccgcaaaagagaactgaaggaagtgtttggagatgaggtggaa
ggagtgaaggatggacacagtgtggatacagcagtaaagaagaagagggtacctcgcttt
gaggaggtggacgaaccagctgttttacctggaccccctacagagagtcctggcatgctt
accaagatgcagatcaagcaaatgatggaagcagccacacggcagattgaggagagaaag
aaacagctaagtattgtggctcctgtccccactgtgcagtccagactgattccatctcag
acggactctagtgctccacgtcccatcctcccagcggtgggtgctactcagtccatcgct
ccttctcaggctgctaacttcatgaatgacgctatagagaaagcccgcaaggcagctgag
ctgcaggccaagatccagtccacgctggccatgaaaccaggaattctgggtgctttggga
aacacaggcccacataacctggtagccctggccaacctgcacgccatgggcattgcacca
cctaaagtggagcctcgtgaaatcacaaagccaactcccctcattttggatgagctcgga
cgaactgttgatgccagtgggaaagaaattgagctcacacatcgtatgcccactctaaaa
gcaaacatcagagcggtgaagagggaacagtttcggcaacagttaaaggaaaaacccagc
gatgacctggaatccacatcttactttgacccacgagtggcccttactcctgcacagaga
gccaagaaaggctttaggttccatgaacaggggcgctttgagaagatcgcccagcgcata
cgcaccaaggctcagttggagaagttacagatggagattgctcaggctgccaagaagaca
ggcatacaggcgtccactaaactagctcttattgcccccaagaaagagctgggagagggg
gagattcctcatatagagtggtgggactcctacatcttgccttcccacatagaattatct
gcatgtacaaatttagatgaggtggaaatgcatggagtcaccaacctagttgaacacccc
attcagatggcccctccagtggatacagataagccagtgactctgggtgtgtatttgact
aagaaggaacaaaagaagttgaggagacaaactcgtagagaaggccagaaagaggtgcag
gaaaaggtccgattgggtcttatgcctccacctgaacccaaagtgcggatctctaatctg
atgagggttttggggacggaagctgtgcaggaccccactaaagtggaggctcatgttaga
gcacaaatggccaagaggcagaaggcccatgaggaggcaaatgcagcacgcaaactcacg
gcagaacaaaggaaagagaagaaggtgaagaaacttaaggaggatttgagtcatggggtt
cacattgctgtttacagaaaagaaacagatgggatgatcaataccttcctcgtcctcctg
cagcagcacagcacctgctcccactgcgctcgcatccacctccaatttgaaagaatccga
aatctgcataacccagccaagaagtttaaggtggaggccaatgcaaaccaactgtacctt
actggcactgtggtactgcacaaagatgtcaacatcgtagtagtggagggaggacccaag
tcacagaagaagtttaaacgtctgatgttgaataggatcaaatgggatgagccgaattcc
aaaagagatgagcctcaagattcagatgatgagggttccaggaagaataataaatgcacc
ttggtttgggagggtacagcaaaggaacgtagctacggggaggttaagtttaagcagtgt
ccaacggaaagcatggctagggaacattttaagaagcatggcaccgagcactactgggac
ttggctctgagtcagagtgttctggagacaactgacgactga
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