Megalobrama amblycephala (Wuchang bream): 125243243
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Entry
125243243 CDS
T08212
Symbol
arid1aa
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125243243 (arid1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125243243 (arid1aa)
03021 Transcription machinery [BR:
mamb03021
]
125243243 (arid1aa)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125243243 (arid1aa)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Helix-turn-helix
ARID
125243243 (arid1aa)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125243243 (arid1aa)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125243243 (arid1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
125243243
NCBI-ProteinID:
XP_048008685
LinkDB
All DBs
Position
LG13:29987476..30010888
Genome browser
AA seq
2282 aa
AA seq
DB search
MAAQVASATSLNTSPPSELKKPDRDPKEESVPGEKQQENKEPGLESGSPARGELQDRADV
GNAGGGGESEMKNGNGNPSRVNNNQNETTGPEGNNHPGMVHHHAPGFQSASYSYAQHYGR
APFHQHGGQQSPGMAAAAGPGALSSSMMDPYQPNSHDHGFPNHQYNNYSPFGNRSPYPGQ
GYGMNSPRSAPQAQAVGGQSAKQQQPAAAASYSNQRYNMGNPQPTSTPTLNQLLTSPSGA
RGYPNYPPSDYNSQDGAKGPADIGSSSGQYGGGHPGWQQRTHHPPPMSPGSTGQPLGRNQ
TPGSMDQMGKMRGQPYGSGGPYSQQPHQGPPSGPQQGPAYPGQGYGPPGPQRYPMGMQGR
MQYGQQMPSYGQQGPGGYVQQGQQPYYGQHGQGPHSGQQQSPYPQPSSGQPGGQAPYSQQ
PHAAQSSGPHGQAGPPYQQPHMPQQTQGQMPGPSPGPSQSPYSQSSAASQSSQSPYPQQQ
VPQSQPSQQVSSQAPPASQAQPSYPPSQGPQQQQQQQPPPPSSQQPPQTPTPASQQPAGH
GQMPQGQPTSYSQNPPQQQQQQQQQSPYQRFPPPPQEISQESFSSQSSAPTSGPPLASKS
STEDMQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSP
PVGSPASASASRSGPLSPVTMPGNQMPPRPSSGQSDGIMHPSMNQPVMGQERGYMQRNPQ
MAPYGSPQSSSALSPRQSSGGQVHAGMVPYQQNNSVANYAPQGGGQYGPQGYPRQPGYSG
MPNASYPGPGMGGSMNPMSGQGGGPLFAGMASGRMPHGQMGARPFGPNMGPNMSPSMGPN
MGNMPPQVGTGMCPPPGLNRKPQDAAAMQHGPANSIHNRLPGYPNMSPGPGMMGSGPPYG
PSMNNMPGMMNTQGSPYPMGGNMSNNTSGMSPGPDFGMDGKINQAQKMNNKVEGTPKTES
KSKKSSSSTTTNEKITRLYELGPEPERKMWVDRYLAFIEEKAMGMSNLPAVGRKPLDLFR
LYMSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDP
PPDIMSGDSKKNQAKIQPPSPAGSGSLQGPQTPQSTSSSMAESGDLKPPTPASTPHSQMP
PMPSGRSSVNLQDPFADSDFSRRSTMTPNSGYQSGMSTPEMPVRMGPYEPNKDHFSGMRK
VGEQFISGGQGPNSSLSDQCNRGPQGPMGNMPMGQRHQYPYGPGYDRRPESGMGTDGSMG
PGVPQPNIMPSSAESGMYSPNRYPPQQQRHESYSNQYPGQGAPPGGTYPNQQPGMYPQQQ
LNYKRPGDGSYPPAKRHHDGEMFSGPYNAQQPQPPPQAPPSGPSSGQQEMFNQYNSSYPG
SERRPPGPQNQFPFPFGRDRMQAGTGPNSQGSMPPQMMGSPMQSGPDGPQGGMWQGRSDM
GYPSYPNRQGPPAGPGQGPSYHAMNRSEDMMSSEPRMNHDGQWPGPRQPPYGPGGAGPPM
SRPLQSNYQSPQTMQNHIPQVSSPTPMPRPMESRTSPSKSPYMPSNIKMQKVGPPVPASH
IVPPSVQPPMMRRDLSFPPGSIEATPPVLKSRRRLTMKEIGTPEAWRVMMSLKSGLLAES
TWALDTINILLYDDNSISNFNLIQLPGFLELIVEYFRRCLIEIFGILREYEVGDPGQRAL
LDPSVLKKDENTVEDEVLVEGMEEDGETEEEDEGEEMHRSKHQEQHSAPLQIKQEEKPRT
LEDSVKKEDCQGIEGESSAEPKTSEPPCLELAVTQEKPKQASKFDKLPLKIVRKKDPFVV
DCSNKLGRLQEFDSGLLHWSIGGGDTTEHIQTHFESKMDLLHQRKHLPAQVPDRKRGAQK
DSQAPSLPSSSEEHRKEVDRQPSPESSTEKVTNGISDLREDRPAVCLETASEGTSHVDKD
QEKKVSEVTTPENIRPAPPSPSLQGQHSIAILEDEPHSKDEAPLVTLSDWQDSLARRCIC
VSNIVRSLSFVPGNDSEMSKHPGLLLLLGRLLLLHHLHPERKQAPLTYEKEEEVDESLGS
KKDEWWWDCLELLRENCLVTLANISGQLDFSVYTESICLPLLDGLLHWAVCPSAEAQDPF
PSLGLNGALSPQRLVLETLCKLSIQDNNVDLILATPPFSRLEKLFGNLVRLVGERKVPVC
REMAVVLLANLAQGDSLAARAIAVQKASVGNLLGFLEDSLAATQFQQSQGSLLHMQGSHF
EPTSVDMMRRAARALLALAKVEENHSEFTLYESRLLDLSVSPLMNSLVSHVICDVLFLIG
QS
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgctacctctctcaacaccagcccgccttccgagctgaaa
aaaccggatcgagacccaaaggaggagtcggtaccgggggagaagcagcaggaaaataag
gaaccgggactagagagcggatctccggcacgcggggaactgcaggaccgggccgatgtg
ggaaatgctgggggaggaggggagtcggagatgaagaacggcaacgggaatccgtcgaga
gtgaacaataatcaaaatgagaccaccggaccggaggggaacaaccaccctgggatggta
caccatcacgcgcccgggtttcagtcagcttcctatagctacgcgcagcactacggccgg
gccccttttcatcaacatggcggacaacaaagccctggcatggcagctgcagcggggcca
ggcgcgctgtcgagcagcatgatggacccctatcaacccaactcccatgatcacggcttc
ccgaaccaccagtacaacaactacagtccgttcgggaaccgaagcccgtacccgggccag
ggctacggcatgaactctccgcgcagcgctcctcaagctcaggcggtaggggggcagtca
gccaagcagcagcagccagcagcggctgcatcttacagcaatcagcggtataacatggga
aacccgcagccaacatccaccccgactctcaaccagcttctcacctccccgagcggtgcc
cggggctacccgaattacccaccgagcgactacaacagccaggacggggctaagggacca
gcagatataggcagcagcagcgggcagtatggtgggggccatccgggttggcaacaaagg
acccatcacccgccacccatgagtcctggaagtaccggacagcccctgggtagaaaccag
actccaggctccatggatcaaatggggaaaatgcgcggtcagccgtatgggtcaggtggg
ccttactcccagcagccccatcaagggcctccttcagggccccagcagggccctgcttac
ccaggccagggctatgggccccctggcccacagagataccctatgggcatgcaaggacgt
atgcagtacggccaacagatgccatcatacggacagcagggaccagggggttacgtgcag
caggggcagcagccttattatggccagcacggtcaggggcctcactccggacagcagcag
tcgccgtacccccagccatcctctgggcaaccaggaggccaggcaccttattcacagcaa
cctcatgctgcccagtcatctggcccacatggacaggctggccctccttaccaacaaccc
cacatgccccagcaaactcaggggcaaatgcccggcccctcgccaggcccatcccagtcc
ccgtactcgcagtcctcggcagcatcccagtctagccagtctccctatccacagcaacag
gtgcctcagtcccagccctcacagcaggtgagctcccaggctcctcctgcatcccaggcc
cagcccagctacccgcccagccaaggcccccagcagcagcaacagcagcagccgccacca
ccatcatcacagcagccaccgcagacgcctacacctgcttctcagcagcccgcgggacac
ggacagatgccacagggacagcccacgtcatactcccagaatcccccacaacaacaacag
cagcagcagcaacaatcaccgtatcagcgatttcctcctcctcctcaggagatttcccag
gagtcatttagctcccagtccagcgctccaacctccggcccgcctttggcatcgaagagc
agcacagaggacatgcagggcagaccctccagtctaccagacctatccggttctatcgat
gacctacctactggtacggagggcgctctgagtcctggagtcagcacatctggagtatct
agcagtcaaggagaacagagcaatccagcacagtcgcccttctccccccacacctctccc
ccggtgggctcgcctgccagcgcctcagcatctcgctctgggccgctgtctcctgtcacg
atgccagggaaccagatgcctccccgcccttcaagtggacagtctgatgggatcatgcac
ccttcgatgaatcaacctgtcatgggacaagagagaggatatatgcagagaaaccctcag
atggctccctatgggtctccacagtctagttctgctttgtctcctcgtcagtcatctgga
ggccaggtgcatgctggaatggttccttatcaacagaacaactctgtagcgaactatgcg
cctcagggtggtggtcaatatgggccacaaggttaccccaggcagcctggttatagtggc
atgcctaatgccagttacccaggccctggcatgggcggatccatgaatcctatgtctggg
caaggaggagggccactgtttgcaggcatggcttctgggaggatgcctcatggccagatg
ggtgcacgtccctttggccccaacatgggtcccaacatgagtcccagtatgggccctaat
atgggtaacatgccccctcaagtgggaacggggatgtgcccacctccaggcctcaacaga
aagccgcaggatgcagcagcaatgcagcatggacccgccaactcgatacacaacagacta
ccaggttaccccaatatgtctcctggtcctggtatgatgggctcaggacctccgtatggc
ccctctatgaacaacatgcctgggatgatgaacacccagggttctccctaccccatgggt
ggtaacatgtctaacaacactagtggcatgtcccctggtccggactttggtatggatggg
aaaattaaccaagcccagaaaatgaataacaaagttgagggtacacccaagactgaatca
aaatccaagaagtcaagttcctccacaacaaccaatgagaagatcactcggttgtatgag
ctaggcccagagccagaaagaaagatgtgggtagaccgttacttggctttcatagaggaa
aaggccatgggcatgagtaacctgccagctgtgggtcgtaagccccttgatctcttccgc
ctctacatgtccgtcaaggagattggaggtcttacacaggttaataagaacaaaaaatgg
agggagctggccacaaatctgaacgtggggacctccagcagtgccgccagctctctgaaa
aagcagtacatccaatgtctgtatgcttttgaatgtaagattgagcgtggagaagaccca
ccacctgacattatgtctggagatagcaaaaagaaccaggccaaaattcagcctccctcc
ccagctggatctggctctctccaggggccccagacaccacagtccaccagcagctccatg
gcggaaagtggagacttgaagccccctactcctgcctccaccccacacagccagatgccc
ccaatgccaagtggcaggagcagtgtgaacttgcaagatccatttgctgatagcgacttc
tcacggagaagcactatgacccccaactctggctaccagtcaggcatgagcaccccagag
atgcctgttcgcatgggaccctatgaacccaataaagaccacttcagtggtatgcgtaaa
gttggagaacagttcatatctggtgggcagggtcccaacagcagtctcagtgatcagtgc
aacaggggaccacaaggccctatgggaaacatgcctatgggccagcgacaccagtatcca
tatggccccggttatgacagaagaccagagtcagggatgggcacagatggcagcatgggg
cctggagtgccacagccaaatataatgccttccagtgctgaatctgggatgtactcacca
aatcgttaccctccacagcaacagcgacatgagtcctatagtaatcagtatcctgggcag
ggtgcgcctcctggtggcacctatccgaatcagcagcctggaatgtacccgcaacaacaa
ttgaactacaaaaggccaggtgatggcagctacccaccagctaaacggcatcatgatggt
gagatgttcagtgggccatacaacgctcagcagccacagccaccaccacaggctccccct
agtggtccctcaagtggtcagcaggaaatgtttaaccagtataacagttcttaccctggt
tctgagcgccgtccacctggtcctcagaatcagttccctttcccctttggaagagatcgg
atgcaagcagggacgggcccaaactcccagggttccatgccacctcaaatgatgggcagt
ccaatgcagtctggtcctgacggtcctcaaggtggcatgtggcagggccgaagtgatatg
ggctaccccagttaccctaaccgtcaaggacctcctgctggtcctggccagggacctagc
taccatgcaatgaaccgatctgaagacatgatgtcgtctgaaccacgcatgaatcatgat
gggcagtggcctgggccacgacaacccccatatggccctggtggtgcaggtccaccaatg
agtagacccttgcagtccaactaccagtctcctcaaaccatgcaaaaccacattccacag
gtttcaagccccacacccatgcctcgccccatggaaagtaggacttcccccagcaaatca
ccctacatgcctagcaatatcaaaatgcagaaggtgggacctccagtccctgcatctcac
attgtacctccctcagtacagcctccaatgatgagaagagacctatccttccctccaggt
tccatagaggctacgccaccagttctcaaatcacgcaggcgtcttaccatgaaagaaatt
ggcactccagaagcatggagagtcatgatgtcccttaaatcaggactgttggcagagagc
acatgggctttagacaccatcaacatcttgttatatgatgacaacagtatttcaaatttc
aaccttatacagctccctggtttcctggaactaatcgttgaatatttccgccgttgcctc
attgagatctttgggattctgagggaatatgaagttggtgatccaggacaaagagctctg
ttggatcccagcgtgctcaaaaaagatgaaaacactgtggaagatgaggtattggtggag
ggcatggaggaagatggagaaacagaggaggaagatgaaggagaagaaatgcacaggtca
aaacatcaagaacaacattcagcaccgctccagataaaacaggaagaaaaaccaaggacg
cttgaagactctgtgaagaaagaagattgccaagggattgaaggagagtcatctgcagaa
cccaagacttcagagccaccatgtctcgagttggctgtgactcaagagaagcccaaacag
gctagcaagtttgataagcttcccttgaagattgtaagaaagaaggatccatttgtggtg
gactgctcgaacaagcttggccgattgcaggaatttgacagtggccttctgcactggagt
atcggtggaggtgatacaacagaacacatccagacacactttgaaagcaagatggacctg
ttgcaccaacggaagcatcttcctgcccaggtcccagacagaaagagaggagctcagaag
gacagccaggcaccttcactgccctcatccagtgaagagcaccgaaaagaagtggatcgg
cagccttctccagagtcatccactgagaaagtgaccaacggaatttcagatttgagggag
gacagacctgctgtctgcttagaaactgcctctgaggggacatcacacgtagacaaagat
caagagaagaaagtatcagaggtgacaactccagaaaacattaggccagcacctccaagc
ccatcattacagggtcagcactccattgccattttagaggatgagccacacagcaaggat
gaggctcctctcgtcacgctctcagactggcaagattcccttgcccgtcgctgcatttgt
gtctccaacatcgtccgcagcctctcgttcgtcccgggcaatgactcagagatgtccaag
cacccagggctgttgttattgctgggccgcttgttgcttctccaccatctgcatccagag
cgaaagcaggcacctttaacctatgagaaagaagaagaggtggatgagagtcttggtagc
aagaaagacgaatggtggtgggactgtctggagctactgcgggaaaattgcttagtcact
cttgccaacatctcaggccagcttgacttctcagtctacactgagagcatctgcctgcct
ctgctggatggcttgctccattgggccgtttgtccttcagccgaagcccaagaccccttc
cctagtctcgggcttaatggcgccttgtccccccagagactagtcctggagaccctctgt
aagctcagcattcaggacaacaatgtggacctcattctggcgacgccaccttttagtaga
ttagagaagctgtttgggaaccttgtgcgtctagttggagagcgaaaggtgcccgtttgt
cgggagatggcggtcgtgctgctggccaatcttgcacagggtgacagcctggcggcccgt
gccattgcggtacagaaggccagtgtagggaatctattgggcttcttggaggacagctta
gcggctacacagttccagcagagccaaggttccttactgcacatgcaggggtcacacttt
gagccaacaagtgtggacatgatgcggcgggctgctcgagctctgctcgccctcgctaaa
gtggaggagaaccactctgagtttacgctctatgaatcacggctactggacctttctgtc
tccccactcatgaactcattggtgtcccatgtcatctgtgatgtactctttttgataggc
cagtcatga
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integrated database retrieval system
