Megalobrama amblycephala (Wuchang bream): 125243249
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Entry
125243249 CDS
T08212
Symbol
nr1d2a
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2a isoform X1
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125243249 (nr1d2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mamb03310
]
125243249 (nr1d2a)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125243249 (nr1d2a)
Nuclear receptors [BR:
mamb03310
]
1. Thyroid hormone like
1D. Rev-Erb
125243249 (nr1d2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125243249
NCBI-ProteinID:
XP_048008698
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Position
LG13:41867619..41876490
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AA seq
539 aa
AA seq
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MQSTKQGGVIAYVCSSSSAPSPESFMSDSSNSRSPSSSPPLPTKPSRITDLPTAGLLSKR
LHPRDKTLAAKSSITKLNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKK
CLKTESCTIVRINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLLEMQTAMNNMM
NNSQLQHVLHGAQTVPCAIETSQSDSSSSSPSPPDSPRSSSDLSRDSESVVPMDTASSCS
SDSGEEDAASNGRVPREDLFTYSSSVSPASSETLSSSKEDEEPQRECWNRWNDNQRRSDC
EGGLQGPYREHVTQQCTRQPENLPYHRNSMNKLQTGGNRGHLVCPMSVSPFVDPCKPGHE
IWEEFSRSFIPAVREVVEFAKRIPGFQDLSQHDQVNLLKAGTFEVLMVRFVPLFDVNERT
VTFLSGRKYSVDLLRSMGAGELLNCMFEFSEKLMALQLNEEEMSLFSAVVLVSADRSAIE
NVSGVEALQEALIRALRNLIMKNHSNEAAVFTKLLLKLPELRSLNNMHSEELLAFKIQP
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcaacaaagcaaggaggcgtgatagcctacgtctgctcctcaagctccgccccc
agcccggagtcattcatgagcgacagctctaacagccgctccccatcatcctccccacct
ctgcccactaagccgagccgtatcacagacctgcccaccgctggactgctgtcgaagcgc
cttcacccacgtgacaagaccctcgctgccaagagcagcatcaccaagctcaatggaatg
gtgctactgtgtaaagtgtgtggagacgtggcctcgggcttccactacggtgttcatgcc
tgtgaaggctgcaagggcttcttcagaagaagcatccagcagaatattcagtataagaaa
tgcctgaagacggaaagctgcactattgtgcggataaaccgcaaccgctgccagcagtgc
cgcttcaagaagtgtttatctgtcgggatgtcacgagacgctgtgcgattcggacgcatc
cccaagcgggagaagcagcggatgctcttggagatgcagacggccatgaataacatgatg
aacaacagtcagctgcagcacgtgcttcacggtgcccagaccgtcccgtgcgccatagag
accagccagagcgactccagctcctcttctccgtcgccgccggattcgcctcggtcctcg
tcggatctctcccgggactcggagtcagtcgttcccatggacacggcgtcgtcctgttca
tcggacagcggagaggaagacgcggcgagcaacggacgcgttccccgcgaggacctgttc
acatacagctcgtccgtatctccggccagctccgaaacgctcagcagcagcaaggaggac
gaggagccgcagcgggaatgctggaaccgctggaacgacaaccagaggcgctctgactgc
gagggcggcctgcaaggaccttacagggaacatgtgacccagcagtgcacccgtcagcca
gaaaacttgccttaccacaggaacagcatgaacaaactccagacgggaggaaacagagga
catctggtatgtcccatgagcgtttcccccttcgtggacccctgcaagcccggtcatgaa
atctgggaggagttctccaggagttttatccctgctgtacgagaagtcgtggaatttgcc
aagcggatccctggcttccaggacctctcccaacacgaccaggttaaccttctcaaggcg
ggaaccttcgaggttctgatggtgcgcttcgtgcctttgttcgacgtgaacgagcggacg
gtgaccttcctcagcgggaggaagtacagcgtggacctgttgcgctccatgggcgccgga
gagctgctcaactgcatgttcgagttcagcgagaagctcatggccctgcagctcaacgag
gaagaaatgagcctcttctccgccgtggtgctggtgtctgcagaccgatcggccattgag
aatgtaagtggcgtggaggccctgcaggaggcgctgatcagagctttgaggaacctgatc
atgaagaaccactcgaacgaagccgccgtcttcaccaagctgcttctgaagctgcctgaa
ctgcgctcgctcaataacatgcactccgaggagcttctagccttcaaaatccaaccttaa
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