Megalobrama amblycephala (Wuchang bream): 125243285
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Entry
125243285 CDS
T08212
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125243285 (prdm1a)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125243285 (prdm1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2H2_6
DUF6761
zf-met
zf-C2H2_15
zf-C2HE
STL11_N
Motif
Other DBs
NCBI-GeneID:
125243285
NCBI-ProteinID:
XP_048008761
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Position
LG13:complement(1479342..1489250)
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AA seq
777 aa
AA seq
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MCGWDQSVLAASHHSSAMLTTEGAPYTADNEELKMDVEDVDMTKWTEDEFEEKCTYIVKD
HTWEGPLENTGLTRAEASLPRNLAFKHPADSKEVIGVVSREYIPKGTRFGPLVGESYTAE
NVPKDANRKYFWRIYSNGEFRHFVDGLDEEKSNWMRYVNPAHSQQEQNLAACQNGMSIYF
YTVKAIPADQELLVWYCPEFARRLNYPASGEIMMQKLKQSLIEAKQQATEVKHPVKREHS
VSEILKDVLQEPSRPLPTHPRCPNSPDRPLYPSAVYPLRPSLNEDFLKGTTVFGLPTRSH
RQCSATPSPSAHSSPERSPESSPAPASLEQRDSLLSFSPALYSRGLTHYHGYSPAGSMPF
YPNPHYSRYLMPHYPVSSLSGPPTLGGIFPHMYPFYSSLVPPHVPFPPGMLPSESGRQFL
LPPDSPAPRDILLPAATSAFSAATSLKDKPILGHGHPYAPAGGSPTAGSAASTGRVPTKP
TSAILSTSRTEDEAINLSKMKRGSAGYKSLDYPLKKQNGKIKYECNVCTKTFGQLSNLKV
HLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRL
HSGEKPYQCKICPAKFTQFVHLKLHKRLHTRERPHQCPHCHRNYIHLNSLRLHLKGYCLA
VSPSPSCSLDELNRVNEEIERFDISDNADRLEEMEGFDIEGMVEKQIFGLLWQEMDFKAS
YHTGSTGGDRHPPPPALSAYRLNDHGSESSVIKVHCSSPIQLLPIKVKKETEEAMET
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctgggaccagagcgtcctggctgcttctcatcacagctcggcaatgttgact
actgagggagcaccctacaccgctgacaatgaggagctcaagatggacgtagaggatgta
gacatgacaaaatggacggaggacgagtttgaggagaaatgcacgtacatcgtaaaggac
cacacctgggagggtcctctggagaacacaggactgacccgggccgaggcgtccttaccc
cggaacctggccttcaaacacccagcagactccaaagaggttattggtgtagtaagcaga
gaatacatccccaaaggcacacgctttggcccccttgtgggagaaagttacactgcagaa
aatgtccccaaagatgcgaacaggaagtacttctggcggatatactcaaatggagagttc
cgtcattttgtggacggactggacgaagagaagagcaactggatgcgttatgtgaatcca
gctcattcccagcaggaacagaacctcgctgcctgccaaaacggcatgagcatctatttc
tacaccgtgaaggccattcctgcagaccaggagctactggtgtggtactgccctgagttt
gcccgtcgtctcaactaccctgcctctggagagattatgatgcaaaagctcaagcagagc
ctgattgaagccaagcagcaagcgactgaagtcaagcacccagtgaaaagagagcacagc
gtttcagagattttaaaagacgtgctgcaagaacccagcagaccacttcccacccatccc
cgctgccccaacagcccggaccgacctctttaccccagtgctgtctatccactccgccct
tccctaaacgaggactttttaaagggcaccacagtatttggcctcccgacccgctcccac
agacagtgttcagcgacgcccagcccttctgcacacagcagtcccgagaggagtccagaa
agcagtcctgcacctgcatcccttgaacaaagagacagccttctctccttctctccagca
ctctacagtcgtggcctgacccactaccatggctactcgccagcaggctccatgccgttc
taccctaacccgcactactcacgctacctcatgccccactaccctgttagtagtttgagt
gggccacctactttggggggtatatttccacacatgtaccccttttatagcagcctggta
ccccctcacgtacccttcccacctggcatgcttccatccgagagcggtcggcaatttctg
cttccacctgactctccggctcccagggacatcctgctcccagcggccaccagtgccttc
tctgcagccacttctctgaaagacaaaccgatcctcgggcacgggcacccctacgctcca
gccggtgggtctccaacagccggctccgcagcctctacgggacgtgttcctaccaagcct
acctcagcgattctgagtaccagccgcacggaggatgaggcgatcaatctcagcaagatg
aaacgaggttccgcaggctacaaaagtcttgattatccacttaagaagcagaacgggaag
atcaagtacgagtgcaatgtttgtaccaagacttttggtcagctttccaatcttaaggtg
cacctgcgtgtccatagtggtgaacgaccctttaagtgtcagacctgcaacaaaggcttc
acccagctggcccacctacagaaacactatttggtccacacaggagagaaaccccacgag
tgccaggtgtgtcacaagcgtttcagcagcactagcaacttgaaaacgcatttgcggctg
cactctggtgaaaagccctaccagtgcaagatctgtccagccaagtttacacagtttgtc
cacctcaaactgcacaaacggctgcacacacgagagcgtccacaccagtgtccgcactgc
caccgcaactacattcacctcaacagtctgcggctccacctcaaaggctactgcttagcg
gtctccccttctcccagctgcagcctggacgaactcaaccgcgtcaacgaggaaattgaa
cgctttgacatcagcgataacgcggacaggctggaagaaatggaggggtttgatatagag
ggcatggtggagaaacagatctttggcctgctctggcaggagatggattttaaggcgtct
tatcacacaggtagcactggaggagaccggcaccccccgccacctgcattatctgcgtat
cgtctgaacgatcatggcagcgagtcctctgtcatcaaggttcattgcagcagccctatc
cagctcctacccatcaaggttaaaaaggagacagaggaggccatggaaacctag
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