KEGG   Megalobrama amblycephala (Wuchang bream): 125243420
Entry
125243420         CDS       T08212                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125243420 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mamb03400]
    125243420 (xrcc1)
DNA repair and recombination proteins [BR:mamb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     125243420 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT F5_F8_type_C
Other DBs
NCBI-GeneID: 125243420
NCBI-ProteinID: XP_048009024
LinkDB
Position
LG13:complement(37437765..37463759)
AA seq 618 aa
MPEIKLKHIVSCSSEDNTHKADNLLSSDTYRKWKAARPGEKQVSVILQLEKEEQIHSIDI
GNEGSAFIEVLVGHSTSVKDQDFEVLLVTSSFMSPTESRNGTNTNRVRFFGPSQLVKATA
QEKWDRLKIVCSQPYSKSIAYGITFIKLHSPPDGNDVPITTPPKLTKLGQFRVKDESPSS
GSNIQPGSLFFSRESTAKSSTGLKVSPQNERLSYAAAALKSDGSSTHSSPSSTSTQQAPV
KRKFEFSKERLEAAGPPPKKPSSSASAESNSATPKSKAKTSATASPISTASPGQKTSDKR
ESPKSKPEPKPKPKPKPKSAEPVAFNRIMEGVVFVLSGFQNPFRGDLRDKALAMGARYRP
DWTPDSTHLICAFANTPKYSQVKAAGGIIVRKEWVMDCHKTKQKISFKRYLMDGAESSSE
SEAEQDESEEETQKTKTPEKRHVTPKKKPIKEEEEDYGGSTDAEGAEDDASGMDTEDELN
RVEMESRRKKAAKESAGVVKDEDPYGGSTDENTDAEEEEDKPIPELPDFLKGKRFYLYGK
FPDNQKRQLQRYIIAFNGAVEDYMSEKVQFVITSEGWDESFEDALMENGSLSFVKPSWIF
AINDRQKMLPYQPYTVVP
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgcctgaaatcaaacttaagcatatcgtgtcttgcagcagtgaggacaatactcacaag
gcggacaacctcttgagctccgacacgtacaggaaatggaaagctgcaagacctggagag
aagcaagtttcggtcattcttcaattggaaaaggaagagcaaattcacagcatagacatt
ggaaatgaaggctctgctttcattgaggtccttgttggacactccacatcagtcaaagat
caagactttgaggttctgttggtcacgtcgtccttcatgtcacccacagagagccgtaac
ggcacaaacacaaaccgagtgcgcttcttcggacccagccagctggtgaaggccacggcg
caggagaagtgggaccgcttgaagattgtgtgcagtcagccttacagcaagtcaatagcg
tatggaatcacctttataaagctgcattctcctccagatggtaatgatgttcccatcacg
actccaccgaaactaacgaaactgggtcagttccgtgttaaagacgaatccccttcttct
ggctcaaatatccagccgggaagtctgttcttcagtagagagagcactgctaaatccagc
acaggactgaaagtgtctcctcagaatgaaaggttgagttacgccgctgctgctttgaag
tccgacggttcgtccacacattcatctcccagcagcaccagcacacaacaggctcctgtg
aagaggaagtttgagtttagtaaagaacgtctggaagccgcaggtccgccgcccaaaaag
cccagttcatctgcctctgctgaatcaaactctgccacgccaaaatctaaagcaaaaacc
agtgcaactgcaagtcccatctccaccgcttctccaggccaaaagacatcagataagaga
gagagtcctaaatccaagccagagcccaagccaaaacccaaacctaagcccaagtctgca
gaaccggttgctttcaaccgcatcatggagggagtcgtgtttgtcctgagtggcttccag
aaccccttccgtggagacctgcgggacaaagccctggccatgggagcccgatacagaccc
gactggactccagactccacacacctcatctgtgcgtttgccaacacgcccaagtacagt
caggtgaaagcggccggaggcattatcgtcaggaaggagtgggtgatggactgtcacaaa
acaaagcagaagatttccttcaaacggtatctcatggatggagccgagtccagctcggag
agtgaagcagaacaggatgagagtgaggaggaaacgcagaaaacaaaaacaccagaaaag
aggcatgtgaccccaaaaaagaagccgattaaggaagaagaagaggattatggtggttca
acggatgcggaaggcgcagaggatgacgcgtctggcatggacactgaagatgagctgaac
agggtggagatggagagcaggaggaaaaaagcagcgaaggaaagcgcaggtgtggtgaaa
gatgaagatccgtatggcggctctacagatgagaacacagatgctgaggaagaggaggat
aaacccatccctgaactgccagacttcctaaaagggaagcgcttctatctctacggcaag
ttcccggacaaccaaaaaaggcaacttcagcgctacatcatcgccttcaacggagctgtt
gaagactatatgagcgagaaggtccagtttgtcatcaccagtgaaggatgggacgaatct
tttgaggatgctttgatggaaaatggaagtctgagttttgtgaagccttcgtggattttc
gccatcaatgacaggcagaaaatgttaccgtaccagccctacactgtagtcccttaa

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