Megalobrama amblycephala (Wuchang bream): 125243489
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Entry
125243489 CDS
T08212
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125243489
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
125243489
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
125243489
NCBI-ProteinID:
XP_048009154
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Position
LG13:3695758..3706316
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AA seq
576 aa
AA seq
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MQSRCYHQSTGLGQDRTDHLDLQMKVDFFRKLGYSPEEVKAALRKLGFGTDTNAVLGELV
RSGAKAMPSSSSDSDDGGFSLPHRGGSSSRGQGSTLEDNGEPESDLKPIVIDGSNVAMSH
GNKEVFSCRGIELAVNYFLDRGHRNITVFVPSWRKEQPRPDVPISDQHILEELERKKFLV
FTPSRRIGGKRVVCYDDRFIVKLAHDLDGIIVSNDTYRDLQSERPEWKRCIEERLLMYSF
VNDKFMPPDDPLGRHGPNLDNFLRKKTTASLDHKRQLCPYGKKCTYGIKCKFYHPERTNQ
SHRSLADELRENARLSGSKEDSRITGRGIYPRNDPGFGSSSPSLEQELEQKLKLEAESSD
SRDVMLNYWDDILSMKKSLNTATVADRTSLQAPFSTNPSSIFSSDSGLGSYEMFSESSQS
TDDLHRMRLSHPQLSGIPSAPAGGQRYQSNMSPFTNFQPNYSAYSSLPLTNPVQSYSLPA
YGGWSYPLYLPQASSLPEPLPCPSSHRSPNAYASQQHSAVPQSNAFQEEREEVRKKLHAI
FNPHHVNKVMEMFPQLKDAQQLAAEVLKLKSRGVFF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaggtgttaccaccaatccactggcctgggccaggacagaactgaccacctt
gatctgcagatgaaggtcgacttcttccgtaagctgggttactctccagaagaggtgaag
gccgccctgaggaagctgggctttgggacggacaccaacgccgtactaggggagttggtc
cgttcaggggcgaaggccatgccctcttccagctctgacagtgatgatggtggcttcagt
ttgccccatcggggaggaagctcatctaggggacagggctcaacgctggaggacaacggt
gaacccgaaagtgacctgaaacctatagtcattgatggcagcaacgtggccatgagtcat
gggaacaaggaagtgttttcatgccgagggattgagctggcagtcaactacttccttgac
cgaggacacagaaatatcactgtgtttgtgccttcctggagaaaagagcagcccaggcct
gatgtacctatttcagatcagcatattttggaagagctggaaaggaagaagtttctggtg
tttacaccttcacgaaggatcggagggaagcgtgtggtctgctatgatgatcgctttatt
gtcaagttagctcatgatctggatggcatcatagtgtccaatgacacctatcgtgacctg
caaagtgaacgtccagagtggaagcgttgcattgaggagagattgcttatgtactccttt
gttaatgacaagttcatgccacctgatgacccactcggccgtcatggtcccaacttggat
aatttccttaggaaaaaaacaacagcgtcgcttgaccacaagcgccaactctgtccttat
ggaaaaaagtgcacatatgggatcaagtgtaagttctaccacccagagcgcactaaccag
tcacatcgctctctagccgatgagcttcgagagaatgccagactatctggttctaaagag
gacagcagaataactggtagaggcatttacccaagaaatgaccccgggtttgggtccagc
tctccctctttggagcaagaacttgaacagaagctcaaattggaggccgagagctctgac
agcagggatgtcatgctcaattactgggatgacattttgtccatgaaaaagtccttaaat
acagccacagtggctgacagaaccagtctgcaagcgccattctcaactaacccttcgtcc
attttcagttccgactctgggcttggatcctatgaaatgttttcagagtcatcccagagc
actgacgacttgcacaggatgagattgagtcatccacaattatccggtatcccttccgca
cctgcaggtggccagcgctaccagtccaacatgagtcctttcacgaactttcagcccaac
tatagtgcctacagttccctgcctctgaccaaccctgtccagagttacagtcttcctgct
tatggtggctggtcataccctctctacttgccacaggcgagcagtttacccgaaccttta
ccctgccctagctcgcacaggtctcctaatgcctacgcaagccagcagcactcagctgtg
ccacagtccaacgctttccaggaagaaagagaggaggtcaggaagaaacttcatgcaatt
tttaacccgcatcacgtaaacaaagttatggaaatgttcccacagctgaaagatgcacaa
cagctggctgcagaggttctcaaactcaagtccaggggagtgttcttctga
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