Megalobrama amblycephala (Wuchang bream): 125243882
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Entry
125243882 CDS
T08212
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03013
Nucleocytoplasmic transport
mamb03015
mRNA surveillance pathway
mamb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125243882 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
125243882 (rbm8a)
03015 mRNA surveillance pathway
125243882 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125243882 (rbm8a)
03041 Spliceosome [BR:
mamb03041
]
125243882 (rbm8a)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125243882 (rbm8a)
Spliceosome [BR:
mamb03041
]
Complex C
Other components
EJC/TREX
125243882 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
125243882
NCBI-ProteinID:
XP_048009702
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All DBs
Position
LG13:complement(30633291..30639766)
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AA seq
187 aa
AA seq
DB search
MLATHSRSLTSSIMADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGAR
SRVREDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDVHDKFAEFGEIKNLHLNLD
RRTGYLKGYALVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKSKRRGGRRRSR
SPDRRRR
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgacgcactctcgttcactcacaagcagcatcatggcggacgtactggatctt
catgaagcggggggtgaagactttcctatggacgaggatggcgacgagagcattcacaag
ttaaaagagaaagccaagaagaggaagggtcgtgggtttggatcagaggaaggagcgaga
tccagagtcagagaggactatgacacagtagaacaggatggagatgagcctggccctcag
agatctgttgaaggatggattctgtttgtgactggtgtacatgaggaggcgacagaagag
gatgtccatgacaagtttgcagagtttggagaaatcaagaacttgcatttaaatttggac
agaagaactggttaccttaagggctatgcactggtggagtacgagacttacaaagaagcc
caggctgcgatggaagggctgaatggacaagatcttatggggcaaccaatcagcgttgac
tggtgctttgtaaggggaccgccgaagagcaagaggaggggtggaaggaggcgcagcagg
agccccgacagacggagacgctga
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