Megalobrama amblycephala (Wuchang bream): 125243956
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Entry
125243956 CDS
T08212
Symbol
jarid2a
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125243956 (jarid2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125243956 (jarid2a)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
125243956 (jarid2a)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
125243956 (jarid2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
125243956
NCBI-ProteinID:
XP_048009791
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Position
LG13:24917838..24962913
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AA seq
1189 aa
AA seq
DB search
MSRERPKRNIIQKKFDDNDGIPWSEERVVRRVLYLSLKEFKTAQKSKVENGTGIVNGSFA
NGHLNGSGTKSGLFAGSCKSDRTQHAVQSKDCSHEYSIEGPVRKRPRLQAQRKFAQSHPC
SPNATPLKVLEAMPPSPAALLNHLTRRKPKTEDFLTFLCLRGSAALPSNMTYFGSAKDDE
DVDEEEDEEEEEDSASNAPASCQSTPRKSKGPNKCIANGHVFNGQTRAAEEHKSSLRARG
KDRVHGKEKNSVASARTSTTHNLRPNRAVPDQKQQPSKMNGTSGASAISSRKTRELRTPP
TKAVKYPKGHVTYTKARLLKEAKLSLSAHTHTRHTHTRHTHTHSNSGKAQTSHAKMQKQV
LSPAIAGRLSGTDTFPPRRNGLRQSKRQLELAGVSLTGAEVEVKRVKVQVVPLETRSRKA
AQETSARPRSQRPKRATAGKLMFTKQMHCKSTVLAKNSPTTSTRDILKPANTPKLSETPK
TSNALKQGNPSNATEPLNPAEPKERGRRSAEVTEVPVFYPGTREFHDPLAYMEFAQGQAE
AFGMYRVVPPAGWRPECKLKEEMRFVSYVQHVHKLGRRWGPNVQRLACIRRHLRTQGINM
EEPPLIGGCELDLARFFQILNEMGGMQQVTDLKTWGRLADLLGIPRSAQDRLAKLQEAYC
QYLLSYDSLSPAQRAQLEKEVLAEKDTLERRSGPLEGQGDISQHAALLLPRCEPKNGLVN
GALHRSGAREHLRELDPTAKTTRQRRLEKRGEEEGVINEQHKCIYRGKSFSLTTFYRAAR
NTMNMCFSKEPDTAEVEKEYWRLVEEKECHVAVHCGRVDTKTHGSGFPVGKSEPFSKHGW
NLTVLSNNSGSILRHLGAVPGVTIPWLNIGMVFSTSCWCRDQNSLPYIDYLHTGADCIWY
CIPAEEKSKLDKVVHTLLQANGTPGLEMLERNIMISPEVLRRKGVKVYRTVQQSGQFMVC
FPGTFVSKVCCGYSVSETVHFANPQWMKLGYEAAKDLKQRRIEEPFSTEKLLYQIATSER
DNKQLMNAVSSLIKDLRNAEISQRRDLFEAGLRLSARYGTNCESHADKKKQQRLRFTEDT
ADRRCQVCQHLCYLSMVVHESDNVVFCLECALRYIQKRRSPRGLKMMFRYTEEQINSLVN
RVCGRALEKGGVKQKAVGPSKTPAKRSPRNKSSALVPLSSSASKSSGRS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgagtagggaaaggccgaagagaaatatcattcaaaagaaatttgatgataacgatggg
atcccatggtcggaagagagagtggtccgccgggtgctctacctctcacttaaagagttt
aagactgctcagaagagcaaagtggagaatggcactggaatagttaatggctcctttgca
aatggtcatttgaatggttcgggaactaaatctgggctgtttgctggaagctgtaagtca
gacaggacacaacatgcagttcagagcaaagactgcagccatgagtactcaattgaaggg
cctgtcaggaagaggccaagactgcaggctcagcggaagtttgctcagtctcatccctgt
tctcccaacgccaccccgctgaaagtgctggaggccatgccaccaagcccagccgccctg
ctcaaccatctcacaagacgcaaacccaaaactgaagacttcctaactttcctctgtcta
agaggctctgctgcgttgcccagcaacatgacgtactttggtagtgctaaggatgatgaa
gatgtagatgaggaagaggatgaggaagaggaagaagacagtgctagcaatgcccctgct
tcctgccagtcaactccacgcaagagcaaaggacccaacaaatgcatcgccaatggtcat
gtatttaacgggcagacacgagctgctgaggaacacaaaagcagtttgagggccagaggg
aaagacagggtccatgggaaggagaagaactctgtagcatcagctaggacctccactaca
cacaatctacgacccaaccgggctgtaccagatcaaaaacaacagccctccaaaatgaac
ggaacatcgggagcctccgctatcagttctaggaaaacgagagaactccgtactcccccg
accaaagctgtgaaataccccaagggccacgtgacttacaccaaagccagactgctcaaa
gaggccaagctcagcctgagcgcgcacacacacacacgccacacccacacacgccacacc
cacacacactccaactcaggaaaagcccaaaccagccacgccaagatgcaaaaacaggtg
ctatcaccagcaattgctgggaggctgagtgggacggacactttcccacccagacgaaac
ggacttagacagtcaaagaggcagttggagttagccggggttagcctgactggagcagag
gttgaggttaagagggtcaaagtgcaagtggttcccttagagacacggagtaggaaagca
gctcaggagacgtcggcgagaccaagatcgcagcggcccaaacgggccacggcggggaag
ctcatgttcaccaaacaaatgcactgtaaatccaccgttctggccaagaacagccccact
acctcaacacgagacattttgaaaccagccaacacccccaaactatcagagacccccaaa
acaagcaatgctctaaaacaaggcaatccttctaatgcgactgagcccctcaacccagct
gagcctaaagaacgaggccggcgcagcgccgaggtcacggaggttcctgttttctatcct
ggcacacgtgagttccatgacccgctagcttatatggagtttgcgcaggggcaagcggag
gcgtttgggatgtaccgggttgttccgccagcgggctggcgtcccgagtgtaagcttaaa
gaggagatgcgctttgtctcatacgtgcaacatgtgcacaagctgggcagacgctggggc
ccaaatgtacagcggttggcctgcatcaggagacacctgcggacacaaggcattaatatg
gaagagcctccacttataggtggctgtgagctggacctagccagattcttccagatcctt
aatgagatggggggcatgcagcaggtgacagacctgaagacgtggggccggctcgccgat
ctgctgggcatcccgcgctcggctcaagataggctggccaagctccaggaggcgtactgc
cagtacctgctctcctacgactctctgtcaccagcccaaagggcccagttggagaaggaa
gtgctggcggagaaggataccctggagagaagaagtgggcccctagagggccagggagac
atatcccagcatgccgctcttctgcttccacgctgcgagcccaaaaatgggctggtgaac
ggagcgttgcaccggagcggagcgcgtgagcacctcagagagctggaccccacggcgaaa
accacccggcagagaagactagagaagagaggggaggaagaaggggtgataaatgaacaa
cacaagtgcatatacagggggaaatcgttctctttgacaacgttctacagggcagccagg
aatactatgaacatgtgcttcagcaaagagccagacactgctgaagttgagaaggagtac
tggagattggttgaggaaaaggaatgccatgttgctgtgcactgtgggagggttgacaca
aagactcatgggagtggatttcctgtgggcaagtctgagccattttcaaagcatggatgg
aatcttactgtcctttccaataactcaggatccatcttgcgtcatcttggtgctgtgcca
ggagtgaccatcccctggctgaacataggcatggtcttttctacctcatgctggtgtcgg
gaccagaacagccttccgtatattgattacctacacactggtgctgattgcatttggtac
tgtattccagctgaagagaaatcaaaacttgacaaagtagtacacacactgctacaggct
aacggcactccagggctggagatgctagagaggaacattatgatttctccagaggtgctc
cgtcgaaagggggtgaaagtgtaccggacagtgcaacagagtggtcagttcatggtatgt
ttcccagggacctttgtgtctaaggtgtgttgtggctacagtgtctcagagacagtgcac
ttcgccaacccccagtggatgaaactgggctacgaggcagctaaggaccttaagcagcgt
cgtatagaggagcctttctccacagagaaactgctctaccagattgcaacatctgagcgg
gacaacaagcagctcatgaatgcagtctccagtctcatcaaagatctcaggaatgcagag
attagccagcgcagggatctgttcgaggccgggctccgtctgtctgcgcgctacggcaca
aactgcgagtctcacgcagacaagaagaagcagcaacgcttgagatttacagaagacacg
gctgacaggcgctgccaagtgtgccagcatctgtgttacctctccatggttgttcacgag
agtgataatgtcgttttctgtctggaatgtgctcttcgatacatccagaagcgcaggtcc
ccccgtggcctcaagatgatgtttcgttacactgaggagcagatcaacagtctggtaaat
cgagtgtgtggcagagcattggagaagggtggagtgaagcagaaagccgtcggccccagc
aagacaccagcaaaacgaagccccagaaacaagagctccgcactggtccccctatccagc
tctgcctcaaaaagcagcggccgctcctaa
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