Megalobrama amblycephala (Wuchang bream): 125245217
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Entry
125245217 CDS
T08212
Symbol
cfap54
Name
(RefSeq) cilia- and flagella-associated protein 54 isoform X1
KO
K25553
cilia- and flagella-associated protein 54
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mamb03037
]
125245217 (cfap54)
Cilium and associated proteins [BR:
mamb03037
]
Motile cilia and associated proteins
Sperm associated proteins
125245217 (cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
Motif
Other DBs
NCBI-GeneID:
125245217
NCBI-ProteinID:
XP_048011694
LinkDB
All DBs
Position
LG14:16101693..16131659
Genome browser
AA seq
3016 aa
AA seq
DB search
MDPSPASYYGPLDKSNPVLYAFQSDLKEFKAHIKKLSCSPNDDYRSYSRGSIKLFETWNK
YKSRLPPSYFEERLLQTADFLLDTKLYRLALWQGYRLHLQQFGTQSLESIRDVEHFKQSF
FSDGFDSKRAQLTFRALQGECQCIFHLEREKSALPDQRGVQKLLSILGFVRILMQAVLPD
ESLCWILYNGSLHMYNICRFLMSAGHSSQVLEYLLWACTCLETSVTLLTANFLPWRATLY
CAVCECYFHDSASVQAEVFARRALSKISELAKLEEMTGSQVSSETQQAYKEATIKLAVMV
FKRSVFEPRRKPKGLFKPKQKGTLKELQLTPWPRTPTERILMEMFEGNAARFLAVLEALR
DSSVRPLQTGMPEEFEVQDVILELISAGTSLLSGFGDSEHTFDESMPPSVNAVTPTSSLF
DTAVAGNSKIAVDAAVKFVKQLFRYEQWSTFSSLSSALMSALANMDGRPFRKYEQELRLL
EAVERLFSTQRVKFTMKDAAFDGQADKNIGPAIMTEEFFNLIQTLHTCVCRTDKDIQPDA
DLVLDIVLFFWAKCKTVFQRAQMRYYDPVHYRGRMANQDQWVETLLLLCEVAHEHQLAEV
DFLLVAEMTLRIAMVLESSMDAPQSGRKTATTVDSEESIPVRKSASSLFMRSRTEQLQTA
LDLVERGVDCVSRGRARSLYGDSAVFDELFMQKFGNYKSSKSSRVPENSSTTDLTALSMD
LHLELLVVQHRLALKLSDSWPEEMSLMENKKSHTNRMKTSETNRPVEDSAVLEKITKNKI
SKSVFLAQKALLTFKKDQTSRETKKILEETITLMEKAELEERRLASCTFPSESSLGLPEK
RQPPPTPLLLTRSNHSMIFTPAPYALEEEVSWYCIYARDAEGVNLKVRLKDCYLCGTGEM
IPAKGECLLHVSGLKPDKTYIFAVAAFDAQGKMVGGAIGETTRPLLASLPLPLLTTWAHI
AQVAYQTGLHSLAKRACNELWSHFTLPSSSNPEVPELEQEASLERLAQTRLRPETLQLSS
PLLQQLFFSTIFIQTDIHIQEGALFCDSLCDRGPLIWGQEARLAECERMLVAIDLALHLN
DSAGTLQAVVNCYGLLAPLIFNQIPSEPVIEVLLKCFSVLLEIPEVLKQKRPAATTESLQ
HMVACMTYYLTKSLRSTQESAMASSVFESGKKLLQELIEPPLQPAKQTSSTEQDGKKTAP
TYDEEPIDQLKFLEAIVMKNMQAETLGNYGVTSCNKTDSHGCELTGQEDPVVLYMVIENS
PLQHAFKEVMKLKQKSCFLEFVVHLLQKALLEDELDLVLRWEQNILNWLSRRDEVLFGLK
KHSGLPGEELKDFTTSVIEYNTEKKKVGTFWGARKLLQKRLLITFKSQNSEREIKAVDTL
LNQLAALIRRHQHLWKLRQMRSEDSLWRCHVNLSLARAHLGILRRNMGPPPQLCFSHLSQ
SFFSLAHCGMLIMWKNIPQQITPPELTLPRPKSVPRPGRTAYKIKVKRKVKHTNQGASNT
SDEELNSADSEVEGEVDSTFRHTRSPKADDAPADQNTFQLLDTLEKASIYMRRAMVLAHR
WSHWTTLQWACRILWDQTSTLALMIERAQGPDARARQLTIEQLYTVITPLLLLASDLLMD
MMEKLKLWNVYDDEDRELEASLYFSAPVDDGTVIDLRWLRTLILHTLELLYYQAKWESLA
HLALLFNAYTRERYSHMVTPVLVHAQRRLLDRISCFGGPPAPQPHFTYTEMISGEKVTCR
NYASRQLLFPCGEGQIMITANDTNPESKELADVKRAMCLVCVPLDVEDTLECFRETLERR
HHALLTFQHSRTLLLLLLADTQHLYVEVPFSKETSGVLQEKVKFNMAASILPGVSPPDLS
TEDFSSLGSIYSTTLSPSQLQTVFSSYNNSIKYLQANKYNSLQVQALHDLGNLHFYNGNR
RSAHYFWSKALDCVLQSSGVLESWDGDSWGCSSSQETLRHAGIWGCLQGALLSAKIAQHI
LTSNINQRTKCCLLSAKLFKCLLMASMPHPMADLSYSTYCVEMDLIPGIDLFSEPDRGNL
GTTVACLSFLCHWLYTSGHLLKSLPVLALYLYIAKTVCRDPHLTVRCRILKIKVLTQLGA
FSQAVKELSSLTFGEEIPVPHGCHHRVEKPSWANEKFIEGKPLLDPYNLQALEEVVNRRP
SKDIMALYGSRLTRWILMARVHLILAICSTIQDLPEPPPPELSESQEKSSSTPCLPDASS
SDESRGLQLSARKLTLGEVKAILLKEAHALVSPELSTPHPLSVDPEEMELAVEIRLLMSN
INMQQGRMAASADMSVSALRLLQSSPVFQSDFRPLPPPKPPSSALRRSRAKTYQSSSGDA
KSVFDLHTGDLPEEVEARERMDIIFWLRCRLAVVRSLVGHIPGTAIYSGADSSAEALRLL
KEGLAEAEAWGDPDTKALLLLQGVQLNTYRGRPREDSTAMLQEIVSLLSGRSALSLRSQM
TLAEAALLLSELRGTGSQTLHLLTQKLLQQQLCATGEFIGLKKGGEVELQGLRNIYLPQL
ALLAKTTMRIGRSLALQALSGSSEGGEEPWRPLIFAQEVLHSALSISQASANRDCQLEAD
ILYYTGVVGRHLISMQKSGPQEVLEALFGCLTTFKHTHCQSLRLAHRCYLEMALIYLQEI
EQITTPPGHLTPPPSPTPDETSKETVRETCQLLYWICLRIALKISEVIGKYGLSHGFTGV
TEGPVPLSSIKALPDFALNDLFHPCGGLENPENCIPSPEAFMDAEREKNSRKCPQLTWVH
MSRYYMHLMNLLQVSSQPGTMHGVDGLLSTSGDTKLALRLSQLHTFFSRHQPSYREEWTI
PDPPAALILKPQQIQHDQPLPDLFPWANTDIQELIIQWYRPCSEDNTILLLFTVNKAPIS
ATNSTADTMAALQAGQRTICLDRMKAVHALLSSTCVEADGHVSYFTSSASSFSSEEQNRK
ATSTPHHQDMLLEKAKHVCTEIRNLLKPDFNSAPVTEKPFDSSMQTLQNLERCFNPATGG
MLQDTVLITWFLSLLS
NT seq
9051 nt
NT seq
+upstream
nt +downstream
nt
atggacccttcaccagcatcctactacggacccctggataaaagcaaccctgtactgtac
gcttttcaaagtgacttaaaagagtttaaagcgcatataaagaaactttcatgctcgccg
aacgacgactaccgatcctactccagagggtccataaaactgtttgaaacatggaacaag
tataaatctcgccttcctccctcttatttcgaagagcgcctgttgcaaactgcagatttc
cttcttgacaccaagctatacaggcttgctctctggcaggggtacagactccatctgcag
cagtttggcacacaaagcctggaaagcatacgagatgtggagcacttcaagcagtccttc
ttctcagacggctttgattcaaagagagcccaacttacgtttcgtgctcttcagggagaa
tgccagtgcatcttccatttggagagagagaaaagtgcactgccagaccagagaggggtt
caaaagttgctgagcatcctgggatttgtgcgcattctgatgcaggctgttctgcctgat
gaaagtttatgttggatcctgtacaatggctcgttacacatgtataacatatgcaggttc
ctgatgtcagcaggccattcttcacaggttttagagtacttactttgggcatgcacatgt
ctagagacctctgttactctgctgactgccaacttcctgccatggagggccacactttac
tgtgctgtgtgtgaatgttactttcatgactctgcttctgttcaggcagaggtgtttgcg
cgccgtgcccttagcaagatcagcgaattggccaagctggaggagatgactggctcccaa
gtgtcatctgagacccagcaagcttataaggaggccacaataaaacttgcagtgatggtg
tttaagcggtcagtgttcgaaccccgcaggaaaccaaaaggcctcttcaaacccaaacag
aagggcactttgaaagagctacagctaactccatggcctcgcacaccaaccgaacgtatc
ctgatggagatgtttgagggaaatgctgctcggtttctggctgtgctggaagctctacgg
gacagctctgtcaggcctctgcagaccggcatgcctgaagaatttgaggtccaggatgtg
atactggagctcatttcggctggcactagcttgttgtccggatttggtgattctgaacac
acttttgatgagagcatgcctccctctgtgaatgcagtcactcctacttcctctctcttt
gacacggctgtcgctggaaatagtaagattgcagtagatgctgcagtgaagtttgtgaag
cagctcttcagatatgaacagtggagcacgttcagctcgctgtcttctgcacttatgtca
gcgttagctaacatggatggccgcccgtttaggaagtatgagcaggaactgaggcttttg
gaagctgtggagcgtttgttttccactcaaagagtaaaattcaccatgaaagatgctgct
tttgatggtcaagctgacaagaatattggtccagcaatcatgacagaagaatttttcaat
cttattcagacacttcatacttgtgtctgcaggacagacaaggatatccagccagatgca
gacttggtgttggacatcgtgctcttcttttgggctaaatgcaaaacagtttttcaaaga
gcgcagatgagatactatgaccctgtgcactaccggggaaggatggcaaaccaagaccag
tgggtggagaccctgctcttgctgtgtgaagtggcccatgagcaccagctggctgaagta
gacttcttattagtggctgaaatgactctcagaattgccatggtgttggaaagcagcatg
gatgccccgcagtccgggagaaaaacagccaccactgtagatagtgaagagtccatccct
gttagaaaatctgcaagctccctgttcatgaggtcccgaactgaacagctgcagactgca
ttggatttagtggaacgaggtgtggattgtgtgtccagaggcagggccaggtcactttat
ggggattctgccgtctttgacgagttgttcatgcagaagtttggtaactacaagagttcc
aagagcagcagagttccagagaacagcagtaccactgaccttactgccctttccatggat
ttacacctagaactactggtcgtccagcacagactcgctctcaaactatcggactcctgg
ccagaagagatgagtctgatggagaataagaagtcacatactaatcgaatgaagacctca
gaaacaaacagacctgtagaagactctgctgtacttgaaaaaatcacgaagaacaagatc
tctaagagtgttttcctggcgcagaaggccttattgacattcaagaaggatcagactagc
cgagagaccaagaaaatacttgaggagaccataacgctgatggagaaagctgagctggaa
gagaggaggctggctagttgtacatttccttcagagagcagcttaggactgccagagaag
agacagccaccaccaaccccattactcctgacacgatccaaccactccatgatcttcaca
cctgcaccatacgctctggaggaggaggttagctggtattgtatttatgcaagagatgca
gagggtgtcaacctaaaagtacgacttaaagactgctacctatgtgggactggagaaatg
atacctgccaaaggtgaatgtttacttcacgtaagcgggttgaaacctgataagacgtac
atttttgcagtggctgcttttgatgctcagggcaaaatggtgggcggagccattggagag
accaccaggcctctactggcctccttgcctctaccactgctaacaacctgggcccacata
gctcaggtggcttatcaaacaggacttcacagtcttgccaaaagagcttgtaatgagcta
tggagccactttacccttccttcaagctcaaatcctgaggttccagagctggaacaagaa
gccagtcttgaaaggctggctcaaacaagactccgcccagagaccctacagctttcttct
cctctcctacagcagctgtttttctccactattttcatccagacagatattcacatccaa
gagggggcattattctgtgacagtctctgtgatagggggcctttgatctggggccaggag
gccagacttgcagagtgtgaacggatgctggtggccattgatcttgctctgcacctcaat
gacagcgctggcaccctgcaggctgtagtaaactgttacggccttctcgctccattaatc
ttcaatcagatcccttcagagcctgtcatagaggtgctgttgaagtgcttttcagtactg
ctggagattccagaagtcctcaagcagaaacgccctgctgccaccacagagtccctgcag
cacatggttgcctgtatgacatattatttaaccaagagcttgcgctccactcaggagagt
gccatggcatcatctgtgtttgagtcgggaaagaagctgcttcaggagctcattgagcct
cctctgcaacccgccaaacaaacatcatcaacggagcaggatgggaagaagacagctccc
acatatgatgaggagcccattgatcagctaaagtttttagaggccattgtcatgaaaaac
atgcaagcagaaacattaggaaactatggtgtcacttcctgtaacaaaacggactctcat
ggatgtgagctcactggacaggaagaccctgttgtactctacatggtgattgaaaacagc
cccctccagcatgcctttaaagaggtgatgaagttgaagcagaagtcttgttttctggag
tttgttgtgcacttgctccagaaagccctgctggaagatgagctagatctggtgttgcgg
tgggagcagaacattttgaactggctcagcagacgtgacgaggttctgttcgggctaaag
aaacactcgggtctaccaggagaggagctgaaagatttcacaacctctgtgatagagtac
aacaccgagaaaaaaaaagttggcaccttttggggtgccaggaagttgctacagaaaaga
ctactgattacattcaagagccagaactctgaaagagagatcaaagctgtggacaccctg
ctaaatcaactggctgctcttatcagaagacaccagcacctctggaagctgaggcagatg
cgctctgaggattcgctgtggcgttgccatgtcaatctgagcctagctcgtgcccaccta
ggcatactgaggaggaacatgggaccacctccccagctctgttttagtcatctatcgcag
tctttcttctctctcgctcactgtggaatgttgattatgtggaagaacattccacagcaa
atcacgccacctgaattgactcttccacgtcccaaatcggtaccccgtcctggacgcact
gcttacaaaataaaagtgaaacgcaaagttaaacacactaatcaaggagcatcaaacacc
agtgatgaggagctgaactctgcagacagtgaagtggaaggtgaagtggactctacgttt
cggcacacccgcagccctaaagctgacgacgctcctgctgaccaaaacacctttcagtta
ctggacacacttgaaaaagcctctatatacatgcgcagagctatggtgctagcacatcgc
tggagtcactggacaactttacagtgggcatgtcggattctgtgggaccaaaccagcaca
ctagccctgatgatagagcgagcccaaggccctgatgcccgtgccagacagctgacgata
gagcagctgtatacagtgatcactcctctactgttgcttgcctcagatcttctcatggac
atgatggagaagcttaagctgtggaatgtttatgatgatgaagatagggagcttgaggcc
agcttatacttctctgctccagtggatgatgggacagtgatcgatctgcgctggctgagg
actctgattctgcacacattagagcttctgtactaccaggccaagtgggagagtcttgcc
caccttgccctacttttcaacgcatacactagggagcgctactcacacatggtaacacct
gttctggtgcatgcacagaggaggctgttggacagaatcagctgtttcggtggtcctcca
gcccctcaacctcacttcacctacactgagatgatctctggagagaaggtgacctgcagg
aattatgcaagcagacagttgctgtttccctgtggagaaggtcagattatgattactgca
aatgatactaacccagagtccaaggaacttgcagatgtaaagagagccatgtgtctggtg
tgtgtaccattggatgtggaggacacactggagtgtttcagagagactctggagagaaga
catcacgcactgctgacctttcagcacagccgaactctgctcctgcttcttctggctgac
acacagcacctgtatgttgaggtgccattctctaaagagaccagtggcgttctgcaggag
aaagtgaaattcaacatggcagccagcatcctgccaggtgtcagtcctccagacctgtcc
acagaagacttcagctctctgggctccatctacagcaccaccctgtctccatcacagctc
cagactgttttctcctcctacaacaattcaattaaatatctacaagcaaataagtacaac
tccctccaggtgcaagcactccatgaccttggaaacctgcatttctacaatggaaatcga
agatctgcacactatttctggagtaaggctctggactgtgttctgcaaagctctggagtt
ctggaatcttgggatggtgactcttggggctgcagctcctctcaggaaaccctgcggcat
gctgggatatggggttgtctccagggagctttgctttccgccaagattgcacagcacatc
ctgacttctaacatcaatcagcgcacaaaatgctgccttctctctgccaaactcttcaag
tgcctactgatggcctctatgccccatccgatggcggacctgtcatactccacatactgt
gtggagatggatctgatcccaggcatcgacctcttctctgagccggatcgagggaatctc
ggcaccactgttgcctgtttgtcttttctctgccactggctgtatacctcaggacacctt
ctcaagtctctccctgtgctggctctgtacctgtatattgccaaaaccgtgtgtcgggat
ccacatcttactgtcagatgcagaatcctaaagataaaggtattgacacaattaggggcc
ttctctcaagcagttaaagaactcagcagtctcacatttggcgaggaaatccctgtgcct
catggatgccaccacagagtggagaagccatcttgggcaaatgaaaaatttattgaaggg
aaacccctgttggatccttacaatcttcaagctctggaagaagtggtcaataggaggcca
agtaaagacatcatggctctttatggctcaagattgaccaggtggatcctgatggccaga
gttcatctcatcttggctatatgtagtactatacaagacctgcctgagccaccgccaccg
gagttatccgaatctcaggagaaaagctctagcactccctgcttgcctgatgcctccagc
agtgatgagtccaggggtctccagctcagtgccaggaaactcacattaggagaagtcaag
gccatactcctaaaagaagcacatgctctggttagtcctgagctctccaccccacatcca
ctgagcgtcgatcctgaagaaatggagctggcagtggagatcagactgttaatgtccaat
atcaacatgcagcagggcagaatggctgccagtgcagatatgtcagtgtctgctttgagg
ctcctccagagttctcctgtgtttcaaagtgatttccgcccgctgcctcctcctaaacca
ccctcctctgctctcagacgatccagagccaaaacatatcagtcaagttccggggatgca
aagtctgttttcgatctccatactggagatcttccagaagaggtggaagcgagagaacgc
atggatatcattttctggctgcgctgtagactggcagtggttcgctctctcgtaggccat
atccctggaactgcaatctactctggtgcagacagtagtgcagaggcgctccggctgctg
aaagagggtctggcggaggccgaggcctggggagaccctgacactaaagccctcctgctc
ctccaaggcgtccaactcaacacataccgtggcagacccagagaagacagtacggccatg
ctacaggagattgtgagcttgttgtctgggcgtagtgctctatctctgcgctctcaaatg
actttagctgaagctgcgttactacttagtgaactgagaggaacaggaagccagactctc
cacctgctcacacagaaactactgcagcaacagctctgtgctactggagaatttataggt
ctcaaaaaaggaggcgaggtggaattacaaggccttaggaatatttatcttccacagctc
gccctgctggccaagacaaccatgcggattggtcgctctttggcattgcaggccttgtca
ggttcctctgagggaggtgaggagccctggaggcccttaatatttgctcaagaagttctg
cattctgcactcagcatctctcaggcctctgccaacagagattgccagctcgaggctgat
atcctctactacacaggagtggtgggaagacatctaatttccatgcaaaaatctggaccc
caggaagtcctagaggccctgtttgggtgtttaaccacatttaagcacactcattgccaa
agcttacgattggcacataggtgctacctggaaatggcattgatatacttacaagagatc
gagcagattaccactcctcctggacatctgactcctcccccatcaccaacacctgacgag
accagcaaggaaacagtcagagagacctgccaactgctctactggatttgtttgagaata
gctttaaagatctcagaagttattggcaagtatggcctttcgcatggattcactggagta
actgaaggccccgtccccctttcttcaataaaagccctgcctgactttgcattgaatgat
ctcttccacccctgtggggggctagaaaaccctgagaattgtatccccagtcctgaagca
ttcatggatgctgagcgtgagaaaaacagcaggaaatgccctcagctgacctgggttcat
atgtcccgctactacatgcacttaatgaaccttctacaagtctcctcacagccaggtaca
atgcatggtgttgatggactactgtccacgtccggtgacaccaaacttgctctcagactc
tcacagttgcacaccttcttcagccgtcaccagccatcttacagggaggagtggaccatt
cctgatccccctgcagctctaatactgaagcctcagcaaatacagcacgatcagcccttg
ccagatctgttcccctgggccaacacggacatccaggaactgatcatccagtggtacaga
ccctgctcagaggacaacacgattcttcttctgttcactgtgaataaagctcctatatca
gcaacgaactctactgcagacacaatggctgcactacaggctggacagagaacaatctgt
ttggacaggatgaaggctgttcatgccctactgagctcaacatgtgtagaggctgatggg
catgtttcatacttcaccagctcagcctcctccttcagctcagaagagcagaacagaaag
gctacctccaccccacatcatcaggacatgcttttggagaaggccaaacatgtctgcact
gagatcaggaatttattgaagcctgatttcaattcagcacccgtcacagagaagcccttt
gactcaagcatgcagactcttcagaacctggaacgctgctttaatcctgcaacaggtggc
atgctacaagatacagtcctcatcacatggttcctctctcttctgagttaa
DBGET
integrated database retrieval system
