Megalobrama amblycephala (Wuchang bream): 125245485
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Entry
125245485 CDS
T08212
Symbol
ngs
Name
(RefSeq) notochord granular surface isoform X1
KO
K07610
desmin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04519
Cadherin signaling
mamb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
125245485 (ngs)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125245485 (ngs)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mamb04812
]
125245485 (ngs)
Cytoskeleton proteins [BR:
mamb04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
125245485 (ngs)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF677
DUF848
FKBP15
DUF1664
Motif
Other DBs
NCBI-GeneID:
125245485
NCBI-ProteinID:
XP_048012023
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Position
LG14:complement(2865458..2871446)
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AA seq
547 aa
AA seq
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MSEDRTLLSHLWRRARTITFTMSHSPERMSSYRRHFEGGLTSSSTLQVRVSSPSPTRGAA
RHRSASYTRSGTMGRRTLSGSRKSRMTSSVSMGTLCLGMGFGVAGGAVDLDAAAAENQAF
LSTRTSERKEMVALNDRLAVYIEKVRSLEQSNKLLETEIDAIKGHYVKPSGLRLLYEEQL
RELIRIADQMKVQRDLAVAAKDAMAGQLEMLKVKYEEALEARKKAELEIEAFRPDVDAAT
SARIALEKRLENLEVELEFLQRIHKKEIEELMAQIYGSVAKVDVAFSLPDLASALKQIQA
QYDSIAAQNLQEMDAWYKSKFQDLNKATSRHMETARSVREEITASKREIQNKQRELDALK
NRNEALLLQIKEAQEKYKQEEEELLIRIETLKEELKSIKGKIALLLREYQDLLNIKMSLE
IEITTYRKLIEGEDSRLSSMVDGLSLLCVSAGMVSSVSGAALSSTGAHSQGLTAAVSSAA
SEKMVSSSSIVNHNHHESVEEFSHEEAVEMTERKTVLIRTVKTDEDTIQRDTEERTITIS
GAADEND
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggacagaacgcttctgtcgcatctttggagacgcgcaaggaccatcaccttc
accatgagtcacagcccagaaaggatgtcatcttaccgccgtcactttgagggtggcctg
acctcgtcttccactctccaggtccgggtgtccagtccttcgcccacccgcggggccgct
cgccaccgctccgccagttacacccgcagcggcactatggggcgcaggacgctctccgga
tcccgcaaatcacgcatgaccagcagtgttagtatgggaacactgtgtctgggcatgggt
tttggggttgcaggaggtgctgtggatctggatgctgccgcagctgagaaccaggctttc
ctcagcacacgcaccagtgagagaaaagagatggttgccctgaacgaccgcctggctgta
tacatcgagaaggtacgttctctggagcagagcaacaagctactggagacagaaattgat
gccatcaagggtcactatgtgaagccgtctggcctgcgtctgctctatgaggagcagctg
agggagctgatcaggattgctgaccagatgaaagtccagcgggacctggcagtagcagca
aaggatgccatggcaggtcagctggaaatgctgaaggtcaaatacgaggaagctttggag
gccagaaagaaggcagagcttgagatcgaagccttcagaccggatgtggatgcagccaca
tctgcccgaattgccttggaaaaacgactggaaaacctagaagtggagcttgagttccta
cagaggattcacaaaaaggaaatcgaggagttgatggctcagatttatggatctgtggct
aaggtggatgtggctttctctttgcccgatctggcctccgctctcaaacagatccaggct
caatatgacagcatcgccgcccaaaacctgcaggaaatggatgcctggtacaaatcgaag
ttccaagatctaaacaaagcaacatcacggcacatggaaacagcaaggagcgtcagagaa
gaaatcacagcttctaagagagagatccagaataaacagagagaactagatgctcttaaa
aacaggaatgaagcactgctgctccagatcaaagaagcccaggagaaatacaagcaggag
gaggaggagctactgatccgtatagagactctgaaggaggaactgaaatctattaagggg
aagattgcactgttgctgagagaatatcaggatctgctcaacattaagatgtcgctggag
attgaaatcaccacatacaggaagctgatagagggagaagacagtcgattatccagcatg
gtggacggtctgtctctcttgtgcgtgagcgcaggaatggtcagcagtgtttctggggca
gcactcagctcgacaggagcccacagtcaagggctaactgcagcggtgagctcagccgcc
tcagagaagatggtctccagcagctcaatagtcaaccacaaccatcacgagtctgtggag
gagttcagccatgaagaggctgtggagatgacggagaggaagacggtcctcattagaaca
gttaagacagatgaggacacgattcaaagggacacagaagaacgcaccatcaccatctct
ggcgccgcagatgagaacgattga
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