Megalobrama amblycephala (Wuchang bream): 125245597
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Entry
125245597 CDS
T08212
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125245597
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125245597
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Ferlin_C
Motif
Other DBs
NCBI-GeneID:
125245597
NCBI-ProteinID:
XP_048012223
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All DBs
Position
LG14:761154..770320
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AA seq
729 aa
AA seq
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MGVSELWSILDPVRQSVPLYSLSGKTLAVDLSLWVCEAQHVQGMMGKVTKPHLRNLFFRV
SSLTLMGVKLVFVMEGDAPKIKAETMSKRSEVRFGSLKAKSVPKPAAAKNTSRGRFKAVL
RECAEMLDCLGVPWVTAAGEAEAMCAFLDSQGVVDGCITNDGDAFLYGARTVYRNFNMTS
KDPQVDCYRMSRVQAELGLSRETLVGLAIFLGCDYIPKGVAGVGKEQTLKLIQSLRGQTL
LQKFDEWSSDRSERSEVAVKKVTHCLVCRHPGSAKSHERGGCVFCQSERFCSPQDYDSQC
PCDWHRTEHSRQASSVEANIRKKTLACEQFPFTEIISEFLVTKDKPVPPFRRRKPNLSLM
QAFALEKMDWPKHYSSEKILPLVTYTELMNRQRGRDSHSLIQPIRIYKPRIKNGVSCFEV
IWTKPDHYVFADGCEEQTEVRTVEEESLFSLAFPEILQDFHRERAEAQENKTKKKKPKAK
KEKPADSHDAVSDLFAQMSLQTDTDPDAVLSSETSQKPPQPDSPPSPEIPAQRSPASQNS
PSVSALIGQLHLSSIDWDSSSFTASPSSSDKTDPRPAESSTRSLKERIMVKNTRTQHPKS
PESLRSIPSAAGATTKTNLEQNPSKKPAAKTAGGTVCKTSRISDDSDVENRPGSQKPRSK
VKVTSKPQRPQIPQKSPNRDQMRSFPAKTPEKPATLVQVHHGKIEDEDSDASVDSPRPLA
ERLKMRFAK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgggggtttctgagctctggtccattctggatccggtccggcagtccgtcccgctctac
agtctttcaggaaagaccctcgccgtggatctcagcctgtgggtctgtgaggcccagcat
gtgcagggcatgatgggaaaagtcacaaagccgcatctcaggaatctgtttttccgcgtg
tcctcgctcactctgatgggtgtgaagctggtgtttgtgatggagggagacgctcctaag
atcaaagccgagaccatgagcaaacgctctgaggtgagattcggcagtctgaaggccaag
agcgtcccgaaaccagcagctgccaaaaacaccagcagaggccgattcaaggccgtcctg
agagagtgtgcggagatgttggactgtctgggcgtgccgtgggtgacggcggccggtgaa
gcggaggccatgtgtgcgttcctggactctcagggcgtggtagacggctgcattacgaat
gacggcgacgccttcctgtacggcgctcggaccgtttacaggaacttcaacatgacttct
aaggatcctcaggtggactgctatcggatgtctcgcgttcaggctgaactcgggctgtcc
agagagacgctcgtgggtctggccatcttcctgggctgcgactacatcccgaagggcgtc
gctggagtcgggaaagaacaaacactgaagctgattcagagtctgagaggacaaactctc
ctgcagaagttcgacgagtggagctcagacagatctgaaaggtcagaggtcgcggtgaag
aaggtcacccactgtctggtctgtcgacaccctggctctgctaaatctcacgagcgcggc
ggctgtgtgttctgtcagagcgagcgcttctgctcgccgcaggactacgattcccagtgt
ccctgtgactggcatcgcactgaacactctcgccaggcctcctccgtcgaagccaacatc
aggaagaagacgctggcgtgtgagcagttcccgtttacagaaatcatcagtgagtttttg
gtgacgaaggacaaacccgtgccgcccttccggaggaggaaacccaacctgtcgctgatg
caggcgttcgctctggagaagatggactggcccaaacactacagcagcgagaagatcctc
ccgctcgtgacctacactgaactgatgaaccgacagagaggcagagactctcacagcctc
atacagcctataagaatatataaacctcgtataaagaacggcgtctcctgcttcgaggtc
atctggacgaaaccagatcattatgtgttcgccgacggctgtgaggagcagacggaggta
cggacggtcgaggaagagtctctcttcagcttggcgtttcccgagatcctccaggacttc
catcgggagagagccgaggctcaggagaacaaaacgaagaaaaagaagccgaaagcgaag
aaagagaagccggccgattcccacgatgccgtgtcggatctgttcgctcagatgtctctg
cagacggacacggatccagatgccgttttatccagcgaaacttcccagaaaccaccacag
cctgattcccctccgtcccctgagatcccagcccagcgctctcctgcttcccagaattcc
ccttcggtgtctgctctgattggccagctgcatctcagcagtatagactgggactcttcc
tcgttcacggcctctccttcctcgagcgacaagactgacccgagacctgcggaaagctcg
actcgttctctcaaggagcggataatggtgaaaaacacccggacgcaacatcccaagagt
cctgaatccctccgttcaatcccatcagctgcaggtgcaacaaccaaaacaaacctcgag
cagaatcccagcaaaaaacctgcagcgaaaaccgccggaggaacggtgtgtaagacgagc
cgaatcagtgacgacagcgatgtggagaaccgacccggatcacagaagccgagaagcaaa
gtcaaggtcacgtccaaaccacagagaccccaaatcccccagaaatcccccaatcgtgac
cagatgaggagctttcctgctaaaaccccagaaaaaccagccaccctcgtccaggtgcat
catgggaagattgaggacgaggattcggacgcttcggtggacagtcctcgaccgctggcc
gagaggctgaaaatgagattcgcaaagtga
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