Megalobrama amblycephala (Wuchang bream): 125245714
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Entry
125245714 CDS
T08212
Symbol
trim24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mamb01001
]
125245714 (trim24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125245714 (trim24)
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125245714 (trim24)
Protein kinases [BR:
mamb01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
125245714 (trim24)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125245714 (trim24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
zf-C3HC4
PHD-1st_NSD
zf-C3HC4_2
PML_CC
PRANC
Motif
Other DBs
NCBI-GeneID:
125245714
NCBI-ProteinID:
XP_048012386
LinkDB
All DBs
Position
LG14:complement(43402886..43433578)
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AA seq
978 aa
AA seq
DB search
MMDGSEKIESDDVVIIVENEAESKRDDQDQGSVRMMMMALMDVCPVCKLSFSSREPKLLP
CLHSFCKRCLPAHNTPASTASNVKQLNMIRCPVCQQECMDVEVLDNFFVKDSVEVPSSTM
EKSCQLCMSCDDNTEATGFCVECAEFLCVTCIDAHQRVKFTRDHTVRQITEMSSEAMGAS
TQKPVFCDIHRQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYKNHKEHLENMTCQ
LQEKKKAIEDVSNTINNGLQQVDENRKTVANEIKKSICNLIMEINRKGKLLVNQLEAITK
DHETLLKKQQQDVMSLSTHLEHVINFTKWATASNSGTALLYCKRLITCQIQYLMRAKCNI
SYVPQSLVRFQCRSAFWASNVDLGSLVVEKTPVRHPSGPQPFPFQQMNPGPRPDGLQAGF
QSLQSQQQQQQQQQQQRQSTLAQLQMQVEKLSQHANRHQQPNQWSWYHGMRLPGPPPHRP
LQGGSPSQTLPSMPQHGRRYGARTPPPILQPSSLPPQTLRGLINNPSFHPKPMEVLPRSR
YPHSAALSSGASLPSPHTLHQQNMQATSYLNRRCEPSTLLSAQRPSYPPSHLSTPTDRTG
MLNWQKHMSGIAQGRQFSQMSITSSEPKTSSVSWKRAEAPQSGPSNPSTKRRRRSSPGPV
IVIKDEPEDDDEVHFVNTSAKASLPDSTGVQSQTPQQGEQQSEKTPEADEDPNEDWCAVC
QNGGELLCCDKCPKVFHLSCHIPILTASPSGEWYCTFCRDLTSPEMEYNINSSGETNSVK
QDPDSEAFTPVDRRKCERLLLRLYCNELSTDFQDPVTPSSMPEYSEIIKTPMDLSVIRSK
LENGSYKSTEDFVADVRLIFKNCATFHKEDTEMASVGANLESYFEELLKLLYPDRTFPGV
KEEGIAALCPDEASPLSKTPPQDPSPAEETARPSGEDLPQGEPRTKDIEEKPENLSSPAV
SSPVNAETDSKATKDPTS
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgatggatggaagtgagaagattgaatcggatgatgtggtgattatcgtggagaatgag
gcggagagtaagcgtgatgatcaagatcagggcagtgtgaggatgatgatgatggctctg
atggacgtgtgtcccgtgtgtaagctcagcttcagcagcagagaaccgaaactgctgccc
tgcctgcactccttctgtaagagatgtttacctgctcacaacacacctgccagcacagcc
agcaacgtcaaacagttgaacatgatccgctgtccagtctgtcagcaggagtgtatggat
gttgaggtcttggataacttctttgtcaaggattctgtggaagtgccgagcagcacgatg
gaaaagagctgtcagctctgcatgagttgtgacgataacaccgaggccaccggtttctgc
gtggagtgtgcagagtttctgtgcgtcacctgcatcgatgctcatcagcgtgtgaagttc
accagagatcacacggtccggcaaataacggaaatgtcctcagaggcgatgggcgcttcc
acacagaagcccgtcttctgcgacatccacagacaggagccgttgaagctgttctgtgaa
acctgcgatcgcctcacctgcagagactgtcagctactcaaacacaaggaccataattac
caatttctagaagatgcgtataagaaccacaaggaacatctggaaaatatgacctgccaa
cttcaagaaaagaagaaagctatagaggacgtgtctaataccattaacaatggccttcag
caagtggatgaaaatcgcaagactgtggctaatgagattaaaaaatccatctgcaatctc
ataatggagatcaacaggaaggggaagttgttagtcaatcaacttgaggcaattacaaag
gaccatgaaaccctcctgaaaaagcagcaacaggatgtgatgtcactctccacacatctt
gaacatgtgatcaactttacaaagtgggccacagccagtaacagtggaactgccctcctg
tactgtaaacgtttgataacatgtcaaatccagtacctcatgcgagcaaagtgcaacatc
tcatacgttccccagagcttggttcggttccaatgtcgatctgctttttgggcctcaaat
gtggatcttggttctttagtcgtagagaaaactccggtccgtcatcccagcggtccacag
ccattccctttccagcaaatgaacccaggccccagaccagatggtcttcaggcagggttc
caaagcttacagtcccagcagcagcaacagcagcagcagcagcagcagcggcagagcaca
ctggcccagctgcagatgcaagtggaaaaactctcccagcacgccaaccgccaccaacag
cccaatcagtggtcatggtaccacggtatgcgcttaccagggccgccaccacatagaccc
ctacagggtggatcgccatctcagacgttacccagcatgcctcagcacgggcgcagatat
ggcgcacgaacccctccacctattcttcagccctctagcctgcctccacagactctgagg
ggtctcatcaacaatcccagcttccatcctaaaccaatggaggtgctgccaagaagccgc
tatccacacagtgctgctctttccagtggagcttcacttccctctccacacacgctccat
cagcaaaacatgcaggcaacatcatacctgaacaggagatgtgaacccagcacgcttctg
tcagctcaaaggcccagttatccacccagtcacctctccacaccaacagatcgaactggt
atgcttaattggcaaaagcatatgtctggaattgcacaaggaagacagttttctcaaatg
tccatcacctcatcagaaccaaagaccagttctgtctcctggaagcgtgcagaagccccc
caaagtggcccatcaaacccctccaccaaaagaaggcgcaggtcgtctccagggccggtc
atcgtcatcaaagatgaacctgaggatgatgatgaagttcattttgtaaacacgagtgct
aaagccagtcttccagacagcacgggggttcagtctcaaacgccacagcagggtgagcag
caatcagagaagacaccagaagcagatgaagaccccaatgaggactggtgtgctgtgtgc
cagaatggaggagaactgctctgctgtgacaaatgtcccaaagtcttccatcttagctgc
catatccctattcttactgcatctccaagtggtgagtggtattgtacattctgccgtgac
cttacctcacctgaaatggagtataacatcaatagtagcggagaaacaaacagtgtgaag
caggatccggattctgaggctttcactcctgtggatagaagaaaatgtgagcgactgctg
cttcgtctttactgcaatgagctcagcacagattttcaggaccctgttacgccatcgtcg
atgccagaatacagtgaaataataaagacgccgatggacctgtctgtgatcagaagcaaa
ctggagaacggcagctataagagcacagaggactttgttgcggacgtcaggttgattttc
aaaaactgtgcaactttccacaaggaagatactgagatggccagtgtgggtgctaatcta
gagagttactttgaggaactgttgaagctcttgtatccagaccggacatttcctggcgtg
aaggaggagggcattgctgctttgtgtcccgacgaagcaagtcccttatcaaagacgcct
ccacaagacccatccccagcagaggagactgcgagaccctctggtgaagatctccctcag
ggggaaccacgcactaaagacattgaggagaagccagagaacttgagctcacctgcagta
tccagtcctgtaaatgctgaaacggacagtaaagcgactaaagatccaacttcctga
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