Megalobrama amblycephala (Wuchang bream): 125246230
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Entry
125246230 CDS
T08212
Symbol
cald1a
Name
(RefSeq) caldesmon 1a isoform X1
KO
K12327
caldesmon
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
125246230 (cald1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mamb04812
]
125246230 (cald1a)
Cytoskeleton proteins [BR:
mamb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
125246230 (cald1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
125246230
NCBI-ProteinID:
XP_048013101
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All DBs
Position
LG14:4257644..4323639
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AA seq
616 aa
AA seq
DB search
MDDDFERRRELRRQKREEMRLEAERMAYRRNEEDEEEAARERRRRARQERLRSKDSEEVA
YKPETPELNNSHSVTVTESVSTSVMSSSGTGEGDEEEQALLERLAKREERRQKRMKEALD
RQEQEDTSQTSESSAGLRRGRSYEVEEEHNSKEVEKEEEKPVEEEEEEEEEEEVVIPREE
VVVEEKPRRSYLREQESVEEISKIPDEDNNEQDAVPSSEIREVILNEDVDDSAVVSGTDE
ENGTAELTAGVHEEKSEIEELTKNGVDEMREAENFEKYETEISENDQSLMEDEDVMRKNK
QPNGGVCEDSPPKHKKAERTFSRGSLRSPEAPEADEADGEDARLEAERKLEELKRRRDEM
ESEEFERMRQKQQEAEVELEELKRKREERRKVLEEEERLRKQEEAERKAREEEEKRRMKE
EIEKRRAEAAEKRQKVEDSVDGETKKPFKCVSPRGSSLKIGERAEFLNRSAQKSSVKASH
APVVSKIDNRLEQYTTAVQSHKEVRSPRSAAIDLPMVTDGIRNIKSMWEKGNVFSSGGSP
ASTNKDAAGIKVGVAGRINDWLNKTPETGKMSGGRPADLKPGDVTSKRSLWENKGSSATK
VASRGETKSVTNGMGH
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgattttgaacggcgcagggagctcaggagacagaaacgggaggagatgcgt
ctggaagctgagaggatggcgtatcgccggaatgaggaggatgaggaggaggccgctcgt
gagcgcagacgaagagcgcgacaggagagactgcgcagtaaggacagtgaagaggtggcc
tacaaacctgagaccccggagctcaacaacagccacagcgttacggtgacagagagcgtg
tccacctcagtgatgtcctccagcgggacgggagagggggacgaggaggaacaggccctg
ctggagcgcctggctaagagagaggagcgcaggcagaagaggatgaaggaagcgctggac
agacaggagcaggaggacaccagccaaacctcagagagcagcgctggtctgcggcgcggc
cggagctacgaggtagaggaggagcacaacagcaaggaggtggagaaagaggaggagaaa
ccggtggaggaggaggaggaggaggaggaggaggaagaggtggtcatccctagggaggag
gtggttgtggaggaaaagccacggaggtcttatttgagagaacaggaatccgttgaggaa
atatctaaaatacctgatgaggacaataatgagcaagatgctgtgccttcttctgaaata
cgtgaggtgattttaaatgaagacgtagatgattccgcagttgtttcggggacggatgag
gaaaatggcaccgcagaactcactgcaggtgtacacgaggaaaagagtgagatagaggaa
ttgacaaagaatggagtggatgaaatgagagaggcagaaaactttgagaaatatgagaca
gagatttcagaaaatgaccagtctttgatggaagatgaagatgtgatgaggaagaataaa
cagccaaatggaggagtgtgtgaggacagccctcccaaacacaagaaagccgagaggact
ttcagccgaggcagcttacgctctcctgaggcgccggaagcggacgaggcagatggcgag
gatgctcgcttggaggccgagagaaagctggaggaactgaagaggagaagagatgagatg
gagagcgaggagttcgagaggatgaggcagaaacagcaggaggctgaagtggagctggaa
gagctgaagagaaagagggaggagaggaggaaggtgctggaagaggaggagcggctgagg
aagcaggaggaggccgagaggaaagccagagaggaggaggagaagaggaggatgaaggag
gaaatagagaagagaagagcggaggcggctgagaagaggcagaaagtggaggattctgtg
gacggagagaccaagaagccctttaagtgtgtcagtcccagaggatcctctctgaagatc
ggtgagagggcagaatttctcaacagatcagcacaaaagagttctgtgaaggcatctcac
gctcctgtggtgtctaagattgataacagattagagcagtacaccaccgcagtgcagagc
cacaaggaggtcagatctcccagatcagcagccatagatcttcctatggtgacggacggt
attcgcaacatcaagagcatgtgggagaaggggaatgtcttcagctctggtggaagccca
gcgtccaccaataaggatgcagctgggataaaggtgggcgtggctggccgcattaacgat
tggttgaataaaactccagagacgggcaaaatgtcaggaggaagacctgcggacctgaaa
ccaggtgacgtgaccagcaaacgcagtctatgggaaaacaaagggtcctctgctaccaag
gtcgcaagcagaggagagaccaaatccgtcaccaatggaatgggccattaa
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