Megalobrama amblycephala (Wuchang bream): 125246795
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Entry
125246795 CDS
T08212
Symbol
prdm11
Name
(RefSeq) zinc finger protein 862 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125246795 (prdm11)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125246795 (prdm11)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
Zn_ribbon_PRDM4
FOG1-like_PR
DUF7822
Motif
Other DBs
NCBI-GeneID:
125246795
NCBI-ProteinID:
XP_048013789
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Position
LG15:complement(27131132..27142607)
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AA seq
1137 aa
AA seq
DB search
MTRTEEYVEVKRGTQESLLPAQMADSCAVPDHSPMETEAECSTSASNKKSTEEPNKKLKV
DHEHCTSFWFCEECKKYFLEECPTHGPPVFVPDTPVASGVPNRAALTVPSGIDVRRDGDK
VDVCCKDENIPKGALFGPYQGQIMTSDKPSGPYSWMIVDKDNKYKFIDGSDETTANWMRF
IKISSDESEKNLSAFQHGDQIYFRVCQRLKVGEKLRVWYSSEYMRRLQSVSRDSIDRNLD
TGVKLEEHDEPKGPVLRSAMHGRRTLSKHGSDEAENQPQAKKKKIDLIFKDVLEASLEAN
QSQNNPLNSTLSFPRARTNVCHVFSQPDGECKVSVFASGLASMEHHESGFDAKCIKMEDT
EEDATLTGEGPSTSFCPNCVRLKRRIRELEAELLRLRGQGHAEIKPVAPSEPLPSEDLRD
AMTPIPAVLEEDDQDVDSADESISADLMVAADESSKLSVGSGRRIRRFKQEWLKKFWFLR
YSPTLNEMWCHVCRQYTVQSSRTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHP
EKTEEMCRNMMTLFNAAYHLALEGRPFSDLRPLAELLKKCDLKVVDQYMNENDCQILIQH
IARTFKEDLAEKIRLSPFLSIIMDGQNDDLLADTVAVYVQFTTTDGLPVTEFLSLQRLCG
GNVEGYLQAVDRAFGVLGLRLQDMLVVGLGIDGSNISSSLRANLYVAIRKTIPWVLCLPV
MIHRPHLEVLDAISGKELSCLEDLENNLKQLLSFYRYSPRMMAELRSTAPTLSEEAEFLG
DIRAVRWIIGEPNVLNALIKDYLEVVAHLKSISSQTQRGDAAAIALSLLQFLLDYQSVKL
IYFLLDIIAVFSRLAFIFQGDYLLASQVDAKIEDAIHEIGQLVDSPGEYLQEFEDNFRES
FNGVDLKNLRVAESKFQSIREKICQRSQGILAQRFDPRSRTVVQACQVLDLASWPLNRDV
LGAYGEEEILVIFDHLETIPSSGRELSQERVDARGSLVVEWRDLKADYCSVNGFKEVVSH
IFRYKQRFPLLNHILQVVRVLPTSTTCCDKGRGSLQKVRRNSRSRLTLDQINDLLTLAIN
GPPIGSFDGKRALDSWFEEKSGNSYSLSAEVLSRMSTAEQKSVLHNMDINAEYYPDI
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaacagaagaatatgtcgaagtgaaacggggcacacaggagtctctccttcct
gcccagatggcagattcctgtgctgttccagaccattctcccatggagactgaggccgaa
tgcagcaccagtgcctcaaataagaagtcaactgaagagccaaacaaaaaactaaaagtt
gaccatgagcactgtaccagtttttggttctgtgaagagtgcaagaagtatttcttggag
gagtgccctacccatgggccacctgtctttgtgccagacactcctgtggcatcaggggtg
cccaatcgggcagctctcactgtaccctcaggcattgatgtccgcagagatggtgataag
gtggatgtctgctgcaaggatgaaaatataccaaagggggcactgtttggtccttatcaa
ggccaaataatgacctcagataaaccttcagggccatactcttggatgattgttgataag
gacaacaaatataaattcattgatgggagtgatgaaactacagctaactggatgaggttt
attaagatttcttcggatgagagtgaaaagaacctgagtgcatttcaacatggcgatcaa
atctacttcagagtgtgtcagagactgaaggtgggcgagaaactacgtgtgtggtacagc
agcgagtacatgaggcgactgcagagtgtgtctcgggacagcattgatcgcaatctagac
acaggagtgaaattagaagagcatgatgagcccaaaggtccagtgttaagatctgcaatg
cacggtagaaggaccctaagtaagcatggaagtgatgaggcagaaaaccagccccaggcc
aagaaaaagaagattgacctcattttcaaagatgttctggaagcatctctggaggctaat
caaagtcagaacaaccccctgaacagcaccttgtcttttccaagagcaagaacaaatgtc
tgccacgttttcagccagcctgacggtgagtgtaaagtgtcagtctttgcctctggattg
gcttccatggagcaccacgagagtggctttgatgccaaatgtattaaaatggaagacacg
gaagaagatgccaccctgaccggtgaaggaccatcgacatctttctgcccaaactgtgtg
aggctaaaacgacgaatacgtgagctggaggctgaactgctccgtctcagaggacagggg
catgctgaaattaaacctgtagcaccatctgagccccttcctagtgaggatctcagagat
gccatgacacccatcccagctgtgcttgaagaggatgaccaggatgttgattctgctgat
gaatccatttctgctgacctcatggtggctgcggatgagtcttcaaaactctctgtgggc
tcaggtcgtcggattcgccgcttcaaacaggagtggctgaagaagttctggtttctccgt
tattcacccacactgaatgagatgtggtgccacgtgtgccgacaatacaccgtccagtcc
tcccgtacttctgcttttatcatcggctccaagcaattcaagatccacaccattaaactg
cacagccagagtaatctgcacaagaagtgtttgcagctttacaaacttcgcatgcaccca
gagaagactgaagagatgtgtcgtaatatgatgacactcttcaacgctgcctaccatctg
gctttggaagggcggccattttccgatctgcgacccttggcagagctcctcaagaagtgc
gacctcaaagtggtggatcagtacatgaacgaaaatgactgtcagattctaatccaacac
atcgctcgaacattcaaagaggatctggctgagaagattcgcctttcgccctttctaagc
atcatcatggatggacagaatgacgatctcctggctgacactgttgcggtttacgtccag
ttcaccaccactgatgggcttcctgtcaccgagttcctctccctgcaaaggctttgcgga
ggcaacgtggaaggctaccttcaggccgtggatcgtgcctttggtgtcctcgggctaaga
ctccaggacatgctagttgttggcttgggaatagatggctcaaacatttcctctagtctg
agggcaaatctttacgtagccattcgaaagacaatcccttgggtgttgtgtctacctgtg
atgatccatcgtccccatttagaggttctggatgccatcagtggtaaggaactgtcttgc
ttggaggatttggagaacaatttgaagcaactgctcagtttctaccggtattctccacgt
atgatggctgagctgaggtctacagcaccaactctctctgaggaagccgaatttcttggg
gatataagggctgttcgttggatcataggggaacccaatgttctcaatgccctaattaag
gactatctggaggtggttgctcacttgaagagcataagcagccaaacccagagaggtgat
gctgctgccatcgctctgtctctcctacagttcctgttggactatcagtccgtgaagctg
atctattttctgttggacatcattgctgtcttttcacgacttgctttcatctttcagggg
gactatctgttggcgtcacaggtggacgcaaaaattgaggatgccattcatgagattggc
caattggtggattccccaggggagtacctacaggagtttgaagacaactttcgagagagt
ttcaatggagtggacctcaagaacttgcgggttgccgagtccaagtttcagtccattcga
gaaaagatctgtcagcgaagtcaaggcatccttgcccaacgttttgatccacgcagtcgc
acagtggtccaggcttgtcaggttcttgacctggcctcatggccacttaacagggatgtt
cttggcgcatatggagaggaggagatccttgtgatttttgaccacctggagactattcct
tcatccggacgtgagctctctcaagaaagagtagatgccagaggaagccttgtggttgaa
tggagggatctgaaagctgattattgtagtgtgaatggttttaaagaagtcgtcagccac
atcttcagatacaagcaacgttttcctcttctcaatcacatcctgcaggttgtcagggtc
ttgccaacgtcaacaacatgctgcgacaaaggaagaggctcgttgcaaaaagtgcgccga
aatagccgttccagactgactctggatcagatcaatgatctgctcaccttggccattaat
ggaccgcctattggtagctttgatggaaagcgagcattggacagctggtttgaagagaaa
tctgggaacagctattcgctctcagcagaggtgctgagcagaatgtccaccgccgaacaa
aagtctgtgttgcacaatatggatataaatgcagagtattatcctgatatttga
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