Megalobrama amblycephala (Wuchang bream): 125246971
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Entry
125246971 CDS
T08212
Name
(RefSeq) LOW QUALITY PROTEIN: neogenin
KO
K06766
neogenin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04350
TGF-beta signaling pathway
mamb04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125246971
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125246971
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mamb04515
]
125246971
Cell adhesion molecules [BR:
mamb04515
]
Immunoglobulin superfamily
DCC/UNC5 family
125246971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
fn3_SORL1
fn3_2
Sp38
FAM176
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
125246971
NCBI-ProteinID:
XP_048014090
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All DBs
Position
LG15:34156706..34316378
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AA seq
1434 aa
AA seq
DB search
MAERGARLLAFYTSLVVLRFGGADKGSDIQGFTPFRFSVEPIDTLAVRGLPAVLNCSAVS
DAPVRVEWKKDGTFLNLVADDRKRQLADGSLLISTVVHSKHNKPDEGVYQCVATIDNLGT
ISSRTARLTVAGLPRFLSQPEGVSVRMGGTEMLSCEVTEELVPFTRWERDSRAVELDGRV
IQLPSGALVISNASQTDGGLYRCTIDGLGPPKNTEEAELQVSADSGVEEKLETLQGPVAV
AKVVGESVLLPCVMKGYPVPVIRWTFNDRPIDEGHERVAVIGGGSLQIVNLTEEDAGIYV
CQADSGNMTSEIQAELTVHVPPRFLTRPSNTYAQESMDIIFECDVTGSPPPTVKWMKDGD
TVIPSDYFRIVKQHNLQVLGLVKSDEGFYQCLAENDAGNVQASAQLIILAIDVALPSTVP
SLTDATTDHVASSPAERSGPTPSAPRDVVASLVSTRFIKLTWRLPAEPHGENITYSVFYS
LDGTNRERVENTSGPGEMQVTIQNLVPDTKYTFRVVASNTNGPGESSAPLTVATQLEVQV
PGPAPNLQVVSVGATSVALSWERPATGNGDIQTYKLFYSEKGQDSEQDMDVTGLSYTMTG
LKKFTEYSFRVVAYNKHGPGVSTEDVTVRTLSDVPSAPPQNLTLEVLNSTSIMVRWQPPP
PGTLNGELTGYKLRYRKGLRRADAIEISTSQLFQLIDGLEKGKVYTVRVSATTVNGTGPT
TEWIAAETFENDLDESQVPGVPSSLHVRPLVNRIVVSWTPPENQDILVRGYKIGYGIGSP
HAHTVTLDYKQRFYSIDNLDPSSHYVITLKAFNNMGEGIPIYNSATTRPQSDPIDPDIDF
YELFNNPYTPAPDPTPMLPPVGVQATVLSHDTVKVSWADNSLAKNQKITDSRYYTIRWKT
NIPANTKFKTANTTSLFHTVTALKPNTLYEFSVMVTKSRRSSTWSMTAHGTTFESIPGSA
PKDVTVISKEGNPRIININWQPPTEANGKITGYIIYYSTDVNAEVHDWVVEPVVGNRLTH
QIQGLTLDTAYYFKIQARNSKGMGPMSDAVQFRTPKAEPSDKMSSDQGLQVKPGHPTLPE
HGIGSNMDKPGITGSQENHILVIVVIVSVGVFTIIAVVVGAVLCTRRSNSHQKKKRAACK
SSTGSHKYKSSSKDLKPPDLWIHHERLELKPMDKSPDPNPVMTETPIPRTAQDPVVEPAH
QRRGHEVEESVSTMAGRRGVRPKMMMPFDSQPPQPVISAHPIHSLDHLHHHHHHYHLPPR
GYLHHQISLRAPATPNTYLDRAPSAESVRNQPPAPEPPVAPSQPITTAELQKTEAVIEEE
EPPSINPPTAHVRPTHPLKSFAVPAVTVSAHNPPTYETALPSTPLLAQPASGVKTASIGT
LNRARAPMAVTVPSAPDQSETSKMLDMTYETDELSEEMAHLEGLMKDLNAITTG
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggggcacggctgctcgcgttttacacaagtctcgtcgttctccggttc
ggcggtgcggataaaggttctgacattcaaggttttaccccgttcaggttctcggttgaa
cccatcgacacgctggccgtacgtggccttcccgctgttctgaactgctcggccgttagt
gacgctccggtaagggtggaatggaagaaggatggaacgttcctgaacctggttgcggac
gacaggaagcggcagctagccgacggctctttgctcatcagtacggtggtccactccaaa
cacaataagcctgatgagggggtgtaccagtgcgtggccaccatcgacaatctgggtacc
atcagcagccgaaccgcacgactcacagtggcaggacttccgcggttcctcagtcagccg
gagggcgtgtctgtgcgcatgggcggcactgagatgctgagctgtgaggtgacggaagag
cttgtgccgttcacccgctgggagagggacagtcgggccgtggaactggatggcagagtg
atacagctgcccagcggagctctggtcatcagcaacgcctcccagactgacggtggactc
taccgctgcacaatagatggtctgggaccgccaaaaaacacagaggaggctgaactacag
gtgtccgcagattcgggtgttgaagaaaaactagagactcttcagggcccggttgccgtg
gcgaaggttgtcggggagagcgtgttgttgccatgcgtcatgaagggatacccggtacca
gtgattcgctggacgtttaacgaccggccgattgatgaaggccatgagcgtgttgctgtg
attggcgggggaagcctgcagatcgtcaacctgactgaagaggatgctgggatatacgtc
tgccaggcggacagcggcaacatgaccagcgagatccaggcggagctcacggtgcacgtt
cctccacggttcttgacgagaccctccaacacttacgcccaggagtccatggacatcatc
tttgagtgtgacgtcaccgggtcgccgccgcccaccgtcaaatggatgaaggatggagac
acggtcatccccagtgattatttcaggatagtgaagcagcataacctgcaggttttgggt
ttagtcaaatcagatgaaggtttttatcagtgtttagcggagaacgacgccgggaacgtc
caggccagcgctcagctcatcatactggctatagacgttgcccttccttctactgtccct
tcattgaccgatgccactactgaccatgtagcgtccagcccggccgagcgcagcggcccc
accccctctgccccgcgtgatgtcgtggcgtctctggtgtccacccgattcatcaagctg
acgtggcgtcttcctgccgagccgcacggggagaacatcacctactctgtgttctacagt
ctggacggcactaacagggagcgtgtggagaacactagcggaccgggagagatgcaggtc
accattcaaaacctcgtccccgacaccaagtacacctttcgggtggtcgcgtccaacact
aacggccctggcgagagttctgccccactcacggtggccacccagctggaggttcaggta
ccgggtccagccccgaatctgcaggtggtctctgtcggcgccacctcggtcgctctgagc
tgggagagaccggccaccggaaacggggatattcagacctacaaactcttttacagtgag
aagggacaagactcggagcaggacatggacgtcacgggtctgtcctacaccatgacgggg
ctcaagaagttcacagagtacagtttcagggtggtggcgtacaacaaacacggccctggc
gtctccaccgaggacgttactgtccgaacgctatctgacgtgccgagcgcccctccgcag
aacctgactctggaggtcctgaactcaacgagcatcatggtccgatggcagccgcctccc
cctggtaccctgaacggagagctgacggggtataaactacgctaccggaaagggctgagg
agggcggacgcaatagagatctcaacctcacagctctttcagctcattgatggcttggag
aaaggaaaggtgtacacggtgagagtgtcggccaccactgtgaacggaaccggaccaacg
acggagtggatcgcagcggagaccttcgagaacgacctggacgagtctcaggtaccagga
gtcccgagctctcttcatgtccgtccgctcgtaaaccgaatcgtggtgagttggactcct
ccagaaaaccaggacattttagtccgaggttataaaatcggatatggaatcggcagccct
catgcccacacggtcactctggattacaagcagcgtttctacagcatcgataacctcgat
cccagttcccattacgtcatcactctcaaggcgttcaacaacatgggcgaaggcattccc
atctacaacagcgccaccaccagacctcagtccgaccccatagaccctgatattgatttt
tatgaactcttcaataacccatacaccccagcacccgaccccactcccatgctgcccccg
gtgggcgttcaggccactgtcctcagccacgacaccgtcaaagtcagctgggccgacaac
tctctcgcaaagaaccagaagatcaccgattccagatattacaccatccgatggaagacc
aacatccccgccaacaccaaattcaagacggcaaacaccacgtctctgtttcatacggtg
acggctctgaaacccaatacactttatgagttctctgtaatggtgaccaagagccgcagg
agcagcacatggagtatgacggcccacgggaccaccttcgagtccattcccggatctgct
cccaaagatgtgacggtgatcagtaaagagggaaatccacgaatcatcaacatcaactgg
cagcctccgactgaagccaacggcaaaatcacagggtacatcatctactacagcaccgat
gtgaacgctgaggtccatgactgggtcgtggagcccgtggtgggaaacagactgacccat
cagattcagggtttgacgctggacaccgcctactactttaagatccaggccagaaactcc
aaaggcatgggacccatgtcggacgcggtgcagttcaggacccctaaagctgaaccatct
gacaaaatgtcgagtgatcaagggctgcaagtcaaacccggtcacccgaccctgccggag
cacgggattggatccaatatggataaaccaggcatcacgggcagccaggagaatcacatc
ctggtgatcgtggtcatcgtttctgttggagtgttcaccatcatcgctgtggtcgtgggg
gccgtcctgtgcacacgccgctccaactcccatcagaaaaagaagcgagcagcctgtaag
tccagcaccggctcccacaagtacaagagttcgtctaaagacctgaaaccacctgacctc
tggatccatcacgagcgtctggagctcaaacccatggacaaatcacctgaccccaacccg
gtcatgacggagacgcccatccctcgcaccgcccaggacccggtcgttgagcccgcccat
cagagacggggtcatgaggtggaggagagcgtgtccactatggccggtcggaggggagtg
agacctaaaatgatgatgccattcgactctcagccgcctcaacctgtgattagcgctcac
cccattcattccctcgatcatcttcatcaccatcatcatcactatcacctcccgccgcgc
ggctaccttcatcaccagatcagcctgagagcgcccgccacccccaacacatacttagac
agggctccgtctgcagagtctgtgaggaatcagccccctgctcccgaacctccggttgcc
ccgagtcagcccatcactacagctgagctccagaagacagaggcggtgatcgaagaggaa
gagccgccgagcataaacccgccgacggcccacgttcgaccgacacacccgctcaagagc
ttcgctgtgccagctgtcactgtttccgcccataacccgcccacctacgagaccgcctta
cccagcacccctctgctggcacaaccagcgtccggcgtgaaaaccgcgtctattgggaca
ctaaatcgagctcgagctccaatggcagtaacagtcccgagtgctcctgaccaatcagaa
accagcaagatgctggacatgacgtatgagacggacgaactctccgaggaaatggcccat
ctggagggattgatgaaggacctgaacgccatcaccacaggctga
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