Megalobrama amblycephala (Wuchang bream): 125246979
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Entry
125246979 CDS
T08212
Symbol
rfx1a
Name
(RefSeq) MHC class II regulatory factor RFX1a isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125246979 (rfx1a)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Other basic domains
RF-X
125246979 (rfx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
RecC_C
Motif
Other DBs
NCBI-GeneID:
125246979
NCBI-ProteinID:
XP_048014127
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All DBs
Position
LG1:complement(1805530..1837066)
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AA seq
1027 aa
AA seq
DB search
MATPAYVRELQQTSQPQGGGVTPTSGQAATVTAAPQQFLAELQTTGATPSAAPSTGQTTP
PPSQAQKSQAIVQAPPAQAPPTQTQYVTAEIQSSPTQSSNAQNTPQYIVVTVTEGSLHSS
DSVSDSSPPAAVVQTGVPTQVVQQVQTAQQRSVVQATSQTTKTEPSPQLNVTSLQSVHLT
QENPFLRQRGSDAQRESELKRQRQIGDWMEHRAAAVVLLEKCTNPFGESLSYAAVNGGLL
DCSSCFPPSLPVAYSPVTFSLPVMSVGWETDRVSYNSAAVPDVQSFLYEMPSAHSVQQQL
QQVPVQHVYTNQVQYVEGGDANYTTSTIRSSSFPYTETPLYTQTTAGQYYETTPASGSEA
TSPGTPLTVSVTTGSPGVSMFVAGTGQIVANPTTVAGGGVTAVVAATGTAANGSGDSGSD
ANGSSGSYVIQGGYMLAGSGTGNSGNGHGYPHPTRASPTTVSINEGEDNSVPSADKKLSS
GPQVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRR
LGTRGNSKYHYYGLRIKASSSLLRLMEDQQHLAMRQQPFSQKQRLKPVQKVEGITNGMSS
GSGQQQQQQQSSGLSDISTQVQQYQQFLDASRALPEFPDVDLQGKALPEGIELEHLKSFQ
LLYREHCEAILDVMVNLQFPLVETLWKTFWRFSESQAGDSATLAVHDESEKRLPKSCLVL
LCKYEPVLRWSRDCDNTLYQGLVEMLIPDVLRPIPSALTQAIRNFAKSLESWLTNAMMNI
PEEMVRVKVTSASAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQ
ASWVCRCEDRVVQRLEQDFKLTLQQQNSLEQWAAWLDGVVSQVLKPYQSSSAFPKAAKLF
LLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEF
ASLGRSLNPLDPDKEEEEEEEEDSEDECQELSLQSDVGAIGDESLEPPAKLARTDQRVLF
TTGSMDN
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggcaactccagcttatgtgagagagctgcagcagacctcgcagcctcagggaggaggt
gtgactcccacatcagggcaggctgccaccgtcacggcagctccccaacaattcctggct
gaacttcagactacaggggccacaccttcagcggccccgtccaccggccagaccacgccc
cctccttcacaagcacagaagagccaggcaatcgtccaggcaccacctgcacaagccccg
cccactcagactcaatatgtcacagctgagattcagagctcacctactcagtccagcaat
gctcagaatacaccacagtacattgttgtcacagttacagagggttctcttcattccagt
gactctgtgtcagattctagtcctcctgctgctgtagtccagactggagttcctacacag
gtggtgcagcaggttcagaccgcacaacagagatcagtagttcaagccacatcccagaca
acaaaaactgagccgagcccccagctgaatgtcaccagcctacagtctgtgcacctgaca
caggagaacccttttctcagacagagaggaagtgatgcacagagagagagtgaattgaag
agacagagacagataggagactggatggagcatagggcagcagcagtagtactactagag
aaatgcactaacccgtttggagagagtttatcttacgcagctgttaatggaggtttgctg
gattgctcatcttgtttccccccatctctacctgtcgcttattcaccagtcaccttctcc
ctacctgtcatgtctgtgggctgggagacagacagggtctcctacaactctgctgctgtg
ccagatgtgcagtctttcctctatgagatgccctctgctcatagcgtacaacagcagctc
caacaggtgccagtccagcacgtgtatactaaccaggtgcagtatgtggaaggaggagat
gctaactacaccaccagtaccattcgttccagcagtttcccctacacagagacccctctg
tatacccagaccactgctggacagtactatgagacaacccccgcctccggttctgaggcc
acgtcccccggcacccctctcaccgtctctgtgacaacagggtcccctggggtgtccatg
tttgtggcggggacagggcagatcgtggccaatcccacaacggtggctgggggcggagtc
acagctgtagtggcagccacggggacagcagccaacggttctggagattccgggagcgat
gctaacggtagcagcgggagctacgtgattcagggcggttatatgctggccggcagcggg
accggcaacagtggaaacggtcacggttatccgcaccccacccgtgcctctccgaccacc
gtgagtataaacgaaggcgaggacaatagcgtgccgtcggcagacaaaaagctgtcctct
ggccctcaggtgcagtggttgttggataattatgagacagcagaaggggtgagtttgccc
cgctccactctctactgccactacctgctgcactgtcaggagcaaaagctggaacctgtc
aacgcggcatccttcggaaaactcatccgctcggtgttcatggggttgaggaccagacgc
ctcggcacacgagggaattccaaatatcactactatggactgcggatcaaagcgagctca
tctctgctccgactgatggaggaccagcagcacctggccatgaggcagcaacccttctcc
cagaaacagaggttgaagccggtacagaaggtggagggaatcactaacgggatgtcgtca
ggatctggacagcaacagcagcagcagcagagctcgggtctatcggacatcagcacccag
gtccagcagtaccagcagtttctagatgcgtccagagctctccccgaattccctgatgtt
gacctgcagggtaaagctttaccagagggcattgagctggaacatctcaagagctttcag
ctgctatacagagaacactgcgaagccattcttgatgtaatggtcaaccttcagttccct
ttggtggagactctttggaaaacattttggaggttcagtgaaagtcaggcaggagactca
gcaacactagctgtgcatgatgagtcagagaagaggctgcccaagtcatgtttggtgctg
ctctgtaaatatgaaccagtgcttcgctggagtcgtgactgcgacaacacactgtaccag
ggcctggtggagatgctcatcccagacgttctgagacctattcccagtgccttaacacaa
gccatccgaaactttgccaagagtcttgagagctggttgactaacgccatgatgaacatt
cctgaagagatggttcgtgtcaaggtgacgtctgcaagcgcgttcgcacagaccctgcgc
aggtacacctctctaaaccacctggcccaggcagctcgtgctgtcctgcaaaacacagca
cagatcaaccagatgctcagcgacctcaacagagtggactttgccaatgtgcaggaacag
gcctcttgggtgtgccgatgtgaggatcgggtggtgcagcggctggagcaggactttaaa
ctgacccttcagcagcagaactctctagagcagtgggcagcctggctggatggtgtggtc
tcacaggtcttaaaaccgtaccagtccagctctgcctttccaaaagcagctaaactcttc
ctgctaaagtggagtttttacagctcgatggtgatcagagacctgactctccgcagtgct
gcaagcttcggctcatttcacctaatccgcctgctctatgatgagtacatgtactatctg
atagagcacagagttgcccaggccaagggtgaaactcccattgctgtcatgggagagttt
gcaagtcttggccgaagtctgaacccactcgatcctgataaagaagaggaagaggaggag
gaagaagacagtgaagatgagtgtcaggagttgtctctgcagtctgatgtgggcgctatc
ggggatgaatctctggaaccgcccgccaagctggctcgaaccgaccagagggtgctgttc
accacaggaagcatggataactga
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