Megalobrama amblycephala (Wuchang bream): 125247398
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Entry
125247398 CDS
T08212
Symbol
fanci
Name
(RefSeq) Fanconi anemia group I protein
KO
K10895
fanconi anemia group I protein
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
125247398 (fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125247398 (fanci)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
125247398 (fanci)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
CSTF2_hinge
Motif
Other DBs
NCBI-GeneID:
125247398
NCBI-ProteinID:
XP_048014628
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Position
LG15:23723589..23744227
Genome browser
AA seq
1336 aa
AA seq
DB search
MSKMKVSVDKIISLSESDGVDELQKHLTLLSDDQLTTMLTNSALKGKDTGVLIKAIFKGS
PVSVSHGANRRLLVYKHCIPLCESGDLQTEVASDIIGLLMLETHSLPGSALATLASLYVD
AIKVGEMNSGRSLELFPTILTALAATETLAYGKGELSGDEYKKQLINSLCSSRWDPQCVI
HLTTMFRDVPLSAEELQFLIEKILRMFLKLDLQEIPPLVYQLLLLSAKGCKKLVLEGIIS
YFKKQDQLQKEEQRNAESEDVEVQTIPQDQLRHVEGTVILHIVFAVRLDHELGREFFKNL
KVAQSDPLCPFSIALLLSVARIQRYEEQVFEFLKSAITKNFKDDQIQHSSKFLQELLPQC
NSVSNMILDTVKNSVFGWDHVTQGLVQLGFILMDSFGPKAGAFGKVTEGTSTTKTPNQQA
CRLGGQVLLESFKMHEPIRGEILEQVLNRLVTKTASPVTHFIDLLSSIVMSAPMILLESS
SKVTETFDQLSYLPLSTVQGLLKAVQPLLKVSMSMKDALILVLRKAMFSSHLDGRKSAVA
GFLLLLKNFRILGSLASSQASQAITSSQVQADVHSRYNTAANEAFCLEILSSLRRCLNQQ
ADVRLMLYEGFHDVLRRNSQLASSIMQTLLSQLKRYFEPEQDLLPPLKLESCISAHGDQV
FLQEPLAHLLCCTVHCLLWNQNVQSGCSVSDDDDDDEDEEGGVQSELHTILESITKRMIK
SELEDFELDKCAEFSTSSSVGVKNSIYAVLVMGLNEVLMEYNFITANYNKNHFEDILELF
KRYHKVSEILRERAGKGRPTSSSKTPRSLLSLGFISMLLTALFRDSTQSREESLSVLRSS
GDFLRYCVSVALQKIQQLEETGHTDGPEGQSPDKTFRHLCDITSVLMWRYTNVPSTVEDA
GKKEKGQSVSLLCLEGLLRVFTTVLQRYPTRMSNFLSSLDVSGEAEGEAEGEGSDLTAQT
AFYIRQFQRALMNQLSGGEEEFNSKEAQLLVSILSVLSRQLSPSSQQFTQMLTWTVKICK
ETNFEDISLTKGLLSLLFNLHVLHKSPVSLLWEMCQDIHSQLGDIDQDVEVEKQSHFAII
SMKTAASTTLLVLSQVGKVLDEVDWLIAKKKGQISSDRTISGNTQQPLGQQDPIEKAFTV
QLGTLLTALHELVQTALPTGPCTDTLMRELSRTYSILTTLTKYYIQLCATQPGQLPARVE
KLVKLSGSHLTPQCYSFITYVQSGELTAGGPEKLKKKKKEDEAVAAASAKVLRETKAIPN
LVFNIEQYEKFLILLSKKSKVNLMQYMKLSTSRDFRINAATLEAALQEQQQDESQQTEAS
QPSEESQAPKKKRRKQ
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatgaaggtttctgtggataagatcatatcattatcggagagtgatggtgta
gatgagctacagaagcatctcactttattgtctgatgatcagctcaccaccatgcttacg
aatagtgctctgaaagggaaggatacaggcgtcctgatcaaagccatatttaaaggttca
ccggtaagtgtatcacatggcgctaaccgaagactgcttgtgtacaagcactgtattcca
ctgtgtgaatctggagacctgcagacggaggtggcctcggatatcattgggcttctgatg
ttggagacacacagtctacctggttccgcattagccacgttagcatctctatatgtggat
gccatcaaagtgggtgagatgaacagtggcagatcgctggaacttttccctacaatccta
acggctcttgctgctacagaaacattggcttacgggaaaggtgagctgagtggagatgaa
tacaagaagcagctgatcaacagtctttgctctagcagatgggatccacagtgtgtgata
caccttacgaccatgttcagggatgttccgttatctgctgaggagcttcagtttttgatt
gagaagattctacgaatgttcctcaagttggatctacaggagattccacctctggtctat
cagctgctgctgctgtctgccaagggctgtaagaagttggttctagagggaatcatcagt
tacttcaagaagcaagaccaacttcagaaagaggagcagagaaatgcagagagtgaagat
gtggaggtgcagaccatccctcaggatcagctgcgacacgtggagggaaccgtcatcctc
cacatagtgtttgccgttcgtcttgaccatgagctcggaagggagttttttaaaaaccta
aaggtggcccagagtgatccattgtgtcccttcagtatcgctctactgctctctgtggct
cgtatccaacggtacgaggagcaggtatttgagttcctgaagagtgccatcacaaagaac
tttaaggatgatcaaattcagcacagctcgaagtttctgcaggaactgctgcctcagtgt
aacagcgtctccaacatgattctggacaccgtcaaaaacagtgtgtttggctgggatcat
gtcactcaaggtctggtgcaactgggatttatacttatggactcatttgggcctaaagct
ggagcatttgggaaggtcacagaaggaacatccaccactaaaacgccaaaccagcaagca
tgtcgacttggtggacaagttcttcttgagagcttcaagatgcatgaaccaatcagagga
gagatcctagaacaagtcttgaaccgattggtgactaaaacagcctcgcctgtcacccat
ttcattgaccttctttccagcattgtgatgtctgctcccatgatccttttggaatcttcc
tccaaggtcacagaaacatttgatcagctctcctacttgcccctcagcactgtacagggg
ctcctcaaagctgtgcagcccctgctcaaagtgagcatgtctatgaaggatgccttgatc
ctggtcctccggaaggccatgttctccagtcatttagatggcaggaagtcagcagtggcg
ggattcctgttgctactgaagaacttccgtattctggggagtttagcttccagccaggcc
agtcaggccattacatccagccaggtccaggcggacgtccactcacgctataacactgcc
gctaatgaagccttctgcctggagatcttgagcagtctacgccggtgccttaaccagcag
gctgacgtccggctcatgctttatgaaggtttccacgatgtccttcgtcgtaactctcag
cttgcaagttccatcatgcagaccctcctgtcacaattgaagcgatactttgaacctgag
caagatctgcttccgcctctgaagctggagtcgtgtatcagcgcacatggagatcaggtg
ttcctccaggagcctctggcccacctgctctgctgcacggttcactgcctgctgtggaac
cagaatgtacagtcgggatgcagtgtgagcgatgatgatgatgatgatgaagatgaggag
ggcggagtccaaagtgaactgcacactatactagaaagcataacgaagcgcatgattaaa
agcgaactggaggattttgagttggataagtgtgctgaattttccacgagttccagtgtc
ggagtaaagaacagcatctacgccgtgttggtgatggggctgaacgaggttctcatggag
tacaacttcatcactgctaattacaataagaaccattttgaggacattctggagctgttc
aagcgctatcataaggtgtctgagatcctgagggagcgggcagggaagggccgccccacg
tcgtccagcaaaacccctcgcagcttgctgtctctaggattcatctccatgttactcact
gctctcttcagagacagcactcagagccgtgaggagagcctgtctgtgttgcgttccagt
ggggacttcctgcggtactgtgtgagcgtggctctgcagaagatccagcagctggaggag
accggacacacagacggaccggagggacagagccctgacaagaccttccgccatctctgt
gacatcaccagtgtgctaatgtggcgctacactaacgtgccgtccaccgttgaggatgct
gggaagaaggagaagggccagagtgtatcgttactatgtctggagggtctgctgcgagtc
ttcaccacagtgctacagcgatacccgacacgcatgagcaacttcctgtcttctttggat
gtttcaggggaagcagagggagaggcagagggcgaggggtctgatctgacagcgcaaacg
gctttctacatccgccagtttcagcgagcgctgatgaaccagctcagtgggggagaggag
gagttcaacagtaaagaagctcagttattggtcagcatcctcagcgttctgtcacgacag
ctcagtccttcctctcagcagtttacgcaaatgctcacctggactgtgaaaatttgtaag
gaaaccaacttcgaggacatctctctcactaagggcttgctgtccctgctcttcaacctg
catgtcctgcataaaagcccagtgtctctgctctgggagatgtgccaggacatacacagc
cagctgggagacatcgaccaggacgtagaggtggagaaacagtctcattttgccatcatc
agcatgaaaacggctgcatccaccacgcttctagtcttgtctcaggttggaaaggtgctg
gatgaagtagactggctgatcgccaagaagaaaggccagataagctcagacagaaccatt
tcaggaaatacccagcagccactaggccagcaggacccgatcgagaaggccttcacggtt
cagttaggcacactgttgacggctctgcatgagctggttcagaccgctctgcccacggga
ccctgcacggacaccctaatgagagagctcagccgaacctacagcatcctcactacactt
accaaatattatattcagctgtgtgcgactcaacctggccagctccccgcacgtgtggag
aaactggtgaagctgtcagggtctcatctcactcctcagtgttacagtttcatcacgtat
gtacagagtggagagctgacggctggaggcccggaaaagttgaagaagaagaaaaaagaa
gatgaggcagtagcagctgcttcagctaaagttcttcgggagaccaaagccatccctaac
ctcgttttcaacattgaacagtatgagaagtttctcattcttctttccaagaaatccaag
gtcaatctgatgcagtacatgaagctgagcacttccagagacttccgaatcaatgctgcc
acgctggaagctgcactgcaggaacagcagcaggatgaaagccaacagactgaagcttct
cagccttcagaggaaagtcaagcaccaaagaaaaagaggaggaagcagtga
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integrated database retrieval system
