Megalobrama amblycephala (Wuchang bream): 125247467
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Entry
125247467 CDS
T08212
Symbol
acanb
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mamb00535
]
125247467 (acanb)
00536 Glycosaminoglycan binding proteins [BR:
mamb00536
]
125247467 (acanb)
04091 Lectins [BR:
mamb04091
]
125247467 (acanb)
Proteoglycans [BR:
mamb00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
125247467 (acanb)
Glycosaminoglycan binding proteins [BR:
mamb00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
125247467 (acanb)
Lectins [BR:
mamb04091
]
C-Type lectins
Lecticans
125247467 (acanb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
EGF_C8A_B_C6
I-set
PGDH_inter
Motif
Other DBs
NCBI-GeneID:
125247467
NCBI-ProteinID:
XP_048014741
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All DBs
Position
LG15:complement(19589855..19600465)
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AA seq
1291 aa
AA seq
DB search
MSLIWLLLYACIHAIYGMILFGDMADQDSTISVSIPVEQTLRPLLGGSMVIPCYFQDNTV
QDPGAPTIAPLSQRIKWSYIYKGRISLILVASDGLVQVETDYLDRVHMVNYPMVPTDATI
EISELRSSDSGSYRCEVMQGIDDNYDSVGMQVQGIVFHYRAISTRYTLTFEMAKAACIQN
SAVIATPAQLQAAYDDGYHQCDAGWLSDQTVRYPIHEPREPCYGDKENFPGVRTYGVRDI
NETYDVYCFAEKMSGRVFYSMSVEKFTFAEAEDQCAKLGAQLATTGQLYLAWKTGMDVCN
AGWLADRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPYPDSRYDAICYGEETEKVLT
NTSPFPEIYTTTDSMFTVATATSSPSDYTEDMTTVGEARGQLVTDEPLEVTSIESPLTLP
YNITEVEEEVIKVAMALPNLGYEIPKDNVTAETKGVVFHYRAALSRYAYTFEEAQVACQK
LGAVIATPELLQAAYEAGLHQCSAGWLQDQTVRYPIVHPRKNCSGDQEDTPGVRSYNVRP
AYERYDVYCYMDQIKGEIFHVSSLAGFTYYEAVAHCRKLGSTLASTGELYAAWNQGFHEC
SPGWLADRSVRYPVRNPDFGCGDNKTAVHTIYAQPNQTGFPNPYSRYDAYCFKANLSILL
DEDTVNATRTEEDLNMTDITELLRPVRPIVPPLIVDLSGSGSGSASGDPDSISGYMSGSG
IPSGSISGSGQSGDGSGHLVRLHEGADTLMWQTSASGSTLEAKEGSGSGSGFSITSGIGS
LDQGSGEESGLFQEQSGASGLPSGLGSGISGSGTSGFFSGGESSGSGFFDVSFIDSEMTD
LTARSSGKQELSGITPFGLTDISGSGSAIDFGSASGFGSGSGSASGFGSGSASETSSFIP
SGHPSGEVSVHNQKHDEEIVILTDNEVIELTFGSTFGPEQGRGSVEISGEGSSQEHYAED
ISLSSSTLHEDYWNANETDDPLPERDEQINVTTQVFDVSDQSPLNTTPPTTSVLTTSPSA
LLQMPKAIEEPSVIDASANPCDPNPCGQGLCSLQDGFAVCQCHSGFSGENCSTPIQGCAE
GWTEFMGSCYIHFDERETWTSAEQHCQELNSHLVSISSRQEQEFVRNQAHDYQWIGLNDR
NVQNQFHWTDGSPLEYENWRPNQPDNYFNTGEDCVVMIWHEDGQWNDVPCNYHLPFTCKS
GPVTCSSPPEVKNARMLGNSKDRYPVNSIVRYQCDSGFIQRHLSVVRCLPNGQWEEPQVE
CIGGKTINRLRKRSVKTHPKPVYSRTWRKVL
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgatttggcttctgctgtatgcatgcatccatgccatttatggcatgatatta
ttcggagacatggctgatcaggacagcaccatcagtgtgagcatccctgtggaacagaca
ctgcgccctctacttggggggagcatggtcataccctgctactttcaggacaacactgtc
caggaccctggtgccccaaccatcgccccactgtcccagcgtattaagtggagctacatc
tacaagggcagaatatcgcttattctggttgccagtgatggcttggtgcaggttgagaca
gattacttggaccgggttcatatggtaaactaccccatggtgccaactgatgctacaatt
gagatctcagaacttcgctctagtgactctggctcctaccggtgtgaggtcatgcagggg
attgacgataactatgattcagtgggaatgcaagttcaaggtattgtgtttcactatcga
gcaatttctacccgatatacattgacatttgagatggcgaaagcagcctgcatccagaac
agtgctgttattgcaactcccgcacagttgcaagctgcctatgatgatggataccatcaa
tgtgatgccggctggctttcagatcaaactgtgaggtatcctattcatgagccaagggag
ccttgctatggagacaaagaaaatttcccaggggtacgaacatatggagtccgagacatc
aatgagacctatgatgtgtactgttttgcagaaaaaatgtcaggcagagttttctactcc
atgtctgtggagaagttcacctttgcagaggctgaagaccagtgtgcaaagttgggagcc
caattggccaccacggggcaactgtacctggcatggaagactggcatggatgtgtgcaat
gctggctggctagcagacaggagtgtacggtaccccattaacatagctcgaccccagtgt
ggtggggggcttttgggagtgcgaacggtttacctgtttccaaatcagactggatatcca
tacccagactcccgctatgatgcaatctgttatggagaagaaacagaaaaggttttaaca
aacacctcaccatttcctgaaatatacactaccaccgattccatgttcactgtggctaca
gccacctcaagcccatcagactatactgaagacatgaccacagtaggagaggcccgtggg
caactggttacagatgagcctcttgaagtcacaagcatagaaagtcctctgacactacct
tacaacataactgaggttgaggaggaagtcatcaaagtggccatggctctacctaatcta
ggatacgagattcccaaggacaatgtcactgctgaaacaaagggagtagtattccactat
cgcgctgccttgagccgctatgcttacacctttgaggaagcacaagtggcgtgtcagaaa
ctgggagcagtcatagccacccctgagctccttcaggctgcttatgaagctggccttcat
caatgcagtgcaggttggctacaggaccaaactgtcaggtatccaatcgtgcatcctcga
aaaaactgctctggagatcaggaggacacccctggtgtgcgctcctacaatgttaggcct
gcatatgagcggtatgatgtctactgttacatggaccaaataaagggggagatcttccac
gtgagttcactagcaggcttcacctactacgaagctgttgcccattgcagaaaactgggt
tctactctagcctcaactggagaactctatgctgcatggaatcagggtttccacgagtgt
agtcctggctggctggctgatcgcagtgtccgctatcctgtccgcaacccagacttcggt
tgtggtgataacaagactgcagtccacactatttatgctcaaccaaaccaaacaggcttc
ccaaacccatactccagatatgatgcatattgcttcaaagcaaatctgtctatactcctc
gatgaggatacggtgaatgctacaaggacggaggaggatcttaacatgacagacataaca
gagctgctgagacctgttcgtccaattgtccctcccttgattgtggacctgtctggttct
ggatcaggctcagcatcaggcgatcctgattccatttctggatacatgtcagggagtggc
atacccagtgggagcatatcaggttctggccaaagtggtgatggatcaggtcatcttgtg
agactccatgaaggtgctgatacactgatgtggcagacttctgcctcaggcagcactttg
gaggctaaagaaggtagtggcagtggtagtggttttagcataacttcaggaataggatca
ttggaccaaggatctggagaggagtctggactcttccaagaacaaagtggagctagtggc
cttccatcaggactcggcagtggaattagcggttcaggaacaagtggattcttcagtggt
ggggaatcgagtgggtcaggcttcttcgatgtgtcatttatagactcagaaatgactgat
ctgactgcaagatcttctggaaaacaggaattgtctggtataaccccatttggcttgact
gatattagtggttctggttctgccattgactttggatctgcctctggctttggatctgga
tctggctctgcctctggctttggatctggctctgcctctgaaacctcaagttttatccct
tcaggtcatccctcaggagaggtgtctgttcacaatcagaaacacgatgaagagattgta
attctaacagacaatgaggtcattgagttgacatttggctctacctttggaccagaacag
ggtcgtggatcagtggaaatcagtggagagggcagtagtcaggaacattatgctgaggac
atatctctttccagtagtactttacatgaagattactggaatgccaatgaaacagatgat
cctctaccagaaagagatgagcaaattaatgtcaccacacaagtgtttgatgtgtctgat
cagtcgcctctgaacaccacaccacccaccacttctgtactcaccacttcaccttcagct
ttactacaaatgccaaaagctatagaggaaccatctgttattgatgcttctgctaacccc
tgtgatccaaacccctgtggtcaaggtttatgctctctacaagatggctttgctgtatgt
cagtgtcattcaggatttagtggggaaaactgctcaacaccgattcagggatgtgccgag
gggtggacagagtttatgggcagctgttacattcattttgatgagcgagagacctggacc
agtgctgagcagcactgtcaagagctaaactctcacctggttagcatatcctcccgacaa
gaacaagagtttgtaagaaatcaagctcacgactatcaatggattgggctaaatgacagg
aatgtgcaaaatcagtttcactggacagatggaagtcctttggaatatgaaaactggaga
cccaaccagccagataattatttcaacacaggagaagactgtgttgttatgatatggcat
gaggatggccagtggaatgatgtaccctgcaactatcatcttccttttacttgcaagagt
ggacctgtcacatgctcatcacctcctgaagtgaaaaatgccagaatgttaggcaacagc
aaagatcgctaccctgttaactccatcgttcgataccagtgtgacagtggattcatacag
cgccacctttctgtagtacgctgcttacctaatggtcagtgggaggagcctcaagtggaa
tgcataggaggcaaaacaatcaacaggctacggaaaagatccgtcaagacacatcccaag
ccagtatatagtcggacgtggaggaaggtcctctaa
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