Megalobrama amblycephala (Wuchang bream): 125247508
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Entry
125247508 CDS
T08212
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125247508 (lrrc4ca)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
LRR_9
Ig_2
LRRNT
DUF7617
Ig_6
Sp38
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
125247508
NCBI-ProteinID:
XP_048014808
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Position
LG15:complement(24489561..24674066)
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AA seq
648 aa
AA seq
DB search
MINKMTSSLMQQTMRGPRWNRALSDPLFVLSLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVRLDELEMSGNQLSIIRPGSF
KGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCASPTSHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRANSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETTEASHDEGHPTVQQKGGPT
PSSGIWETLPPSFTTTTTTTARTPMSTKATDKTYTIPVTALIDGSLNTLDEVMKTTKIII
GCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPTMEGHLALPP
LEHEHLNHYTAYKTVYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaagatgacctcctccctgatgcagcagacgatgagaggtcctaggtggaac
cgggccctgtccgacccattgttcgtgctgtcactggccctgcagcttctggtggtggct
ggcctggtgcgagcgcagacctgcccctccgtctgctcttgtagcaaccagttcagcaag
gtcatttgtacgcgacgtggccttcgagatgtacctgatggtatttccaccaacacaagg
tacctgaaccttcaggagaacctcatccaggtgattaaggttgacagcttcaagcatttg
aggcacctggagatcctacagctcagcaaaaaccatatccgcaacattgaaatcggagct
ttcaatgggctggccaacctcaacactctggagctcttcgataaccgtttaaccacaatc
cccaatggggctttcgagtacctgtccaaacttaaggagctttggttgaggaataaccct
attgagagtataccctcttatgccttcaaccgtgtaccatcgctgcgaaggctagacttg
ggtgagttgaaaaggctctcttatatctcagaaggtgcctttgaaggcctaagcaacttg
cggtacctgaacctgggcatgtgcaacttgaaggagatccccaacctcattcctcttgtt
cgtttggatgagttggagatgtcaggaaaccagctctctataattaggccagggtctttc
aaaggcctcgtccacttacagaaactgtggatgatgcatgcgcagatccagacgatcgag
agaaatgcctttgatgatctccagtcccttgtggagctcaatttggcccacaataacctt
accctcctgcctcatgacctcttcaccccactacatcacttggagagggtacacttgcac
cacaacccctggaattgcaactgtgacatcctctggctcagctggtggctaaaggaaatg
gtgccggccaataccagttgctgcgcccgctgtgcgtcacctactagccacaaagggcga
tacatcggcgaacttgaccagaactatttccattgttatgcaccggtgatcgtggagcca
ccggcggacctgaacgtgactgagggaatggcagcagaactgaaatgtcgagcgaattct
ttgacctcagtcagctggatcacgcccaatgggtcaatcatgacgcatggggcgtacaag
gtacgcatttccgtgctcaacgatgggacgttaaactttaccaatgtcacgatgcaggac
actggaacatacacttgtatggtgagcaactccgcaggcaacacaacagcctcggctacg
ctcaacgtgtcctcgacagagaacagcagcttcagttacttcactacagttaccgttgag
accacagaagcgtcacatgatgagggccacccaacggtacagcagaaaggcggccccact
ccttcttctggaatttgggagactttaccaccttccttcaccaccactaccaccaccaca
gcacggacgccaatgtccacaaaggccaccgacaagacctacaccatccctgtcacggcc
ctgatcgacggctccctcaacaccctggatgaggtcatgaagaccactaagatcatcatc
ggttgctttgtggccatcacactgatggccgccgtcatgctgatcatcttttataaaatg
cgcaaacagcatcaccagcagaaccaccacgcaccgacacgaaccattgagattatcaac
gtggatgaggattgcgtaacgggtggacctaccatggagggccatcttgcccttccccca
ctggagcatgagcacctgaatcattacactgcttacaagactgtgtacaaccatgcctcc
accatcaattctatacacagctctgcccacgaacctttgctaattcgggccagctcaaaa
gacaatgtacaagaaacccagatctga
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