Megalobrama amblycephala (Wuchang bream): 125247517
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Entry
125247517 CDS
T08212
Symbol
myo5c
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vc
KO
K10357
myosin V
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125247517 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125247517 (myo5c)
04131 Membrane trafficking [BR:
mamb04131
]
125247517 (myo5c)
03029 Mitochondrial biogenesis [BR:
mamb03029
]
125247517 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mamb04812
]
125247517 (myo5c)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125247517 (myo5c)
mRNA cycle factors
P-body specific factors
125247517 (myo5c)
Membrane trafficking [BR:
mamb04131
]
Others
Actin-binding proteins
Myosins
125247517 (myo5c)
Mitochondrial biogenesis [BR:
mamb03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
125247517 (myo5c)
Cytoskeleton proteins [BR:
mamb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
125247517 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
ATG16
nSTAND3
Csm1_N
AAA_16
Myosin_N
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
125247517
NCBI-ProteinID:
XP_048014816
LinkDB
All DBs
Position
LG15:complement(30793799..30823741)
Genome browser
AA seq
1742 aa
AA seq
DB search
MALSELYTKYNRVWIPDAEHVWKSAEILTDFKPGDTELELLLEDGTELQYPLEGGEKLPP
LRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKIIYTYCGIILVAVNPYKQLPIYGD
AVIHAYSGQNMGDLDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFA
MVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDKRYQIIGANMRT
YLLEKSRVVFQSENERNYHIFYQMCACANQPEFKGLRLLGANKFNYTRLGGETEIEGVDD
RADMAETRRTFSLLGLKDSFQADVFKVLAAILHLGNVVIKENSSEKSSIGSRDPHLAIFC
DLMGVNMENMCRWLCHRRIVLSAETVVKPQPKERAINARDALAKQIYAHLFDWVIHKINQ
ALMVPGKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKED
IPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDKNWLQKLYNFLGSNPLFEKPR
MSNDSFMIQHFADKVEYQCKGFLEKNRDTLYEELVDIMRTSQFALLADFFKEEEPNSVHK
MIKVKPAQARVKASNKQLRTTVGDKFRSSLYLLMETLNATTPHYVRCIKPNEEKQPFEYD
SKRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSQSELKLGEKKQTCRTVLQ
KLIPDSNQYKFGXTKIFFRAGQVAYLEKLRLDHLRGACVTIQKHVRGWRQRRRFLHMRQA
AITIQQYVRGKKQIRRTVTALALKQGWAAVVIQRHCRGYLVRKIYQLVLRAAIIIQAYTR
GWMARKRFRKMMAEHKALVLQKYARAWLVRRRFQTMRRLVINVQLSYRVQQLRKKVEEQN
KENRGLMERVTSLSNARAQGLEKIQALEAELGKLTNEMAALEERARTNSEEANQAIALLR
NDKEKLVQVNKALEQKLKDTTLQMQDQFEDVKRKLMEDLEREARLRKVAEHNGELQKEDA
DKEIVALKEESRRLKEERIRLQTQVEEDMKVNAELQEQLLQLTKHVKVIPDLRKEINSLQ
MQRAEADKAMRAQSLQARAKMGLIMRQLLSNTTEEVLIQRLNEDIDDGADLLTAFDGMEK
AAKVMETQLREQKEAYGSQLETLVFKNEHLNKENEQLQALFQEKSNVNQSIGQEVARLTA
ENMAIPELKQQVSELNRHKHELETQLQDQSAEMSAKIKQLSNELQLTVEEERSQRRLLEE
KITESERRREEMERQMADLQEENEQLQKAQLSESEAKNKLRQETSHLTAENMDFEEQLDM
KDRLIKRLQDQIKALQTHVTANQKAVPAVPKEYLGMLEYKKEDENRLIKALILELKPRGV
GVQMIPGLAAHLLFMCVRHADYLNDGNKLKSLMHGIIIAIKEVIAGQQENFEVLSFWLSN
TYHFLNCLKQYSGDEEFMKHNTPRQNKNCLKNFDLSEHRQILSDLAINIYHQFISVMEDT
LYPMIIPGMLEHESLQGISSMKPTGFRKRSNSVFEDGGDLSGAEPFSVTSILQQLGTFHT
SMAQQGMEPQLQGQVIRQLFYLIGSTSVNSILLRKDLCSCRKGMQIRCNISYLEEWLREK
GLQSSCAMETLGPLSQVAWLLQVNKTTDEDAAEIKQRCSELSSVQIVKILNSYTPIDDFE
KRVTPSFVRKVQALLQERESSSQLMMDSQYRFQVTFPFCSSPQALELLQVPSSLRLGFAT
RI
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtcggagttgtatacaaagtataacagggtgtggatccctgacgcggaacat
gtttggaaatctgcggagattctgacagatttcaagcctggagatactgagctggaacta
ctgctggaggatgggacggagttgcagtatcctctggaagggggtgagaagttgccaccc
ctccgaaacccggacatcctggtgggtgagaatgacctcacggccctcagctaccttcac
gagccggccgtgctacacaacctcaaagtccgatttgtcgagtccaaaatcatctataca
tattgtggaattatcctggtggcagtcaatccatacaagcagcttcccatctatggagat
gcagtcatccatgcgtattctggtcaaaacatgggtgacctggaccctcatatatttgct
gtggctgaggaggcctacaaacaaatggccaggaataacaagaatcagtccatcattgtg
agcggagagtccggagctggaaagaccgtatcagctcggtatgctatgagatacttcgct
atggtcagcaaatctggcagcaaaactcgcgttgaggataaagttttggcatccaatccg
atcactgaggccattggaaatgcaaaaacaaccagaaatgacaacagcagtcgattcggg
aagtacactgagatcagcttcgacaaaagataccaaatcattggtgccaacatgaggacg
tacctcctggaaaagtcaagggttgtgtttcagtcagagaatgagagaaattatcacatc
ttctaccaaatgtgtgcttgtgcaaatcagccggagttcaaaggcttgagactgttgggt
gcaaacaagtttaattacactcgtttgggcggagagacggagatcgagggtgtggacgac
cgcgctgacatggcagaaacacgcagaaccttcagtctactgggtcttaaggacagtttt
caggctgatgtgtttaaggtgctcgctgcaattctgcatttaggaaatgtagtcatcaag
gagaacagctctgagaaatcatccatcggttccagagacccgcacttggccatattctgt
gacctgatgggcgtgaacatggagaacatgtgccggtggctatgtcacagacggatagtc
ttgtcagcggagacggtggtgaaaccgcagcccaaggaacgtgccatcaatgctcgtgat
gccttggccaaacaaatctacgcccatctgtttgactgggtcatccacaagatcaaccag
gcactaatggtccctgggaagcaacattcatttattggagtgttggatatttatggattt
gagacatttgaagttaacagtttcgagcagttctgcattaactacgccaacgagaagctg
cagcagcagttcaacctgcacgtgtttaaactggagcaggaggagtacatgaaagaggac
atcccatggacgctgatcgatttctacgacaatcagcctgttattgatctcatcgaggct
aagatgggcatcctggaccttttggatgaggagtgtctgttcccacagggcactgataaa
aactggctgcaaaagctgtacaattttcttggttcaaacccactatttgagaaacctcgt
atgtcaaatgactcttttatgatccagcattttgctgataaggtagaatatcagtgtaaa
ggttttttggagaagaacagagacacgctttatgaagagctagtcgacatcatgcgcact
agtcagtttgctctcttggcagacttttttaaagaggaggaaccaaattctgtccacaaa
atgatcaaagttaaaccagcacaagccagagtcaaagcttcaaacaagcagctgagaacc
accgtaggagacaagtttcgaagttccttgtacctgttaatggagacgctgaacgctact
acacctcattatgtgcgctgcattaaacccaatgaggagaaacagccatttgagtacgac
tcaaagcgtgtggtgcagcagctgagggcctgtggtgtgctggagaccattcgcatcagt
gcccagagttacccatccaggtggacgtatatagagttttacagccgttacagtatcttg
atgagccagtctgagctgaagcttggagagaagaagcagacgtgcaggacggtcctgcag
aaactcattcctgattccaaccagtacaagtttgggncgactaagatcttcttccgggcg
ggacaggtggcgtacctggagaagctgcgtttggatcatcttcgtggggcttgtgtgacc
attcagaagcacgtgaggggctggaggcagagacgcaggttcctgcacatgagacaagct
gcaatcacgatacaacagtatgtgcgtggaaagaaacagatcagacgcactgtgacagct
ctggcgctgaagcagggctgggctgctgtggtgattcagagacactgtcgtgggtatctg
gtacggaagatttaccagctcgtcctgagggctgcaatcatcatacaggcctacaccaga
ggatggatggcccgcaagcgctttagaaagatgatggcagagcacaaggctctggttctg
cagaagtacgctcgagcttggctggtgcgccggcggtttcaaacaatgcgacggctggtc
atcaacgtccagctgtcgtacagagtccagcagctgcgaaagaaggtggaagaacagaat
aaggagaaccgtggcctcatggaaagagtcaccagtttgtccaatgcacgtgctcaagga
ctagagaagattcaggctctggaggcggagcttggaaagctaaccaatgagatggcagct
ttagaggagagggcgagaacaaactcagaagaggccaatcaggcaatcgctctgctcagg
aatgataaagagaaacttgttcaggtgaataaggctttggagcagaaactgaaagacacg
accctgcagatgcaagatcaatttgaggatgtaaagagaaaactgatggaagatctggaa
agagaggcgaggctcagaaaggtggcagagcacaacggtgaactccagaaagaagacgcg
gacaaagagatcgtagcactgaaagaggaaagccgtagactgaaagaggagcgaatcaga
ctccagacgcaagtggaggaggacatgaaggtcaatgcagaactgcaagaacaacttctg
cagctcactaaacacgtcaaggtcataccagatttacgtaaagaaatcaacagcctgcag
atgcaacgagctgaagctgataaagccatgagagctcaaagtctacaagccagagctaag
atgggtttaatcatgaggcagctgctcagtaacaccacagaagaagttctcatccagagg
ctgaatgaagatattgatgatggagctgatcttctcactgcttttgacggcatggagaaa
gctgcaaaggtgatggaaactcagctgcgggagcagaaagaagcttatgggagtcaactg
gaaactctggtcttcaaaaacgaacatttaaacaaagagaacgagcagcttcaagctctc
tttcaggagaaaagtaacgtcaaccaaagcatcgggcaggaagtggcccgcctcactgct
gagaacatggcgattccagaactgaagcagcaggtgtcagaactgaaccgccacaaacat
gagcttgagacccagttacaagatcagagcgctgagatgagcgcaaaaataaagcagtta
tcaaatgagcttcagctcactgtcgaagaggagcgatcacagcgcaggctcctggaggag
aagattacagagagcgagagaagaagagaagagatggagagacagatggctgacctccag
gaggagaacgaacagctacagaaagctcagctctcagagagcgaagccaagaacaaactc
agacaggagacgtcacacctcacagctgagaatatggactttgaggagcagttagacatg
aaggacagattgataaaacgactccaagaccaaatcaaagctcttcaaacacatgtgaca
gccaatcagaaagcagtaccggctgtgcccaaagagtacttgggcatgttggagtacaag
aaggaggatgaaaacaggctgatcaaggcgctcatactcgagctgaaacctcgaggtgtg
ggtgtgcaaatgatccccggtctggctgcacatctcctcttcatgtgtgtgagacacgcc
gattacctcaacgatggaaacaagctcaagtccctcatgcacggcatcattatagccata
aaagaggtgatcgcgggccaacaggagaattttgaagttctgtccttctggctctccaac
acgtatcactttctcaactgtctcaaacagtacagtggggatgaggagttcatgaagcac
aacacgcctcgtcagaataagaactgcctgaagaacttcgacctgtcggagcaccggcag
attctcagcgacctcgccatcaacatctaccatcagttcatcagcgtgatggaggacacg
ctctatcccatgatcatccccgggatgttggagcacgaaagtctccagggaatctccagc
atgaagcccacgggtttccgtaagcgctcgaatagcgtgttcgaggatggcggggacctc
agcggggccgagccgttcagcgtgacctccatcctgcagcagctcggcacgttccacacc
agcatggcacagcagggcatggagccgcagctgcagggtcaggtcatacgacagctgttc
tacctcatcggatccacgtcggtgaacagcattctgctccgtaaggacctgtgctcctgc
cggaagggcatgcagatcaggtgtaacatcagttatctagaggagtggctgcgagagaag
ggtctgcagagcagctgcgccatggaaacgctggggccgctgtctcaggtcgcctggctt
cttcaagtcaacaagaccacagatgaagacgcagccgagatcaagcagaggtgctccgag
ctctcgtccgtgcagattgtgaaaatccttaactcctacacacccattgatgatttcgaa
aagcgagtgactccgtcctttgtccgtaaagtgcaggcgttgctgcaggagcgcgagagc
tcgtctcagctgatgatggactcacagtatcgtttccaggtcacctttcccttttgctcc
tcgcctcaagcactggaactcctacaggtgcccagcagcctccgtctgggattcgccact
cgtatttga
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integrated database retrieval system
