KEGG   Megalobrama amblycephala (Wuchang bream): 125247544
Entry
125247544         CDS       T08212                                 
Symbol
wdr61
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    125247544 (wdr61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mamb03019]
    125247544 (wdr61)
Messenger RNA biogenesis [BR:mamb03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     125247544 (wdr61)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_EML_2 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WD40_Gbeta WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N eIF2A Beta-prop_EIPR1 Beta-prop_VPS8 WD40_RFWD3 Beta-prop_NWD2_C Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR41 Tricorn_2nd Ge1_WD40 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_NUP159_NUP214 PROPPIN Cytochrom_D1 Beta-prop_WDR75_2nd Beta-prop_LRRK2 WDR54 WD40_like Beta-prop_RIG_1st Beta-prop_DCAF12 Vgb_lyase Beta-prop_IFT122_2nd Beta-prop_pof12 DUF2415 Nucleoporin_N Chorion_S16
Other DBs
NCBI-GeneID: 125247544
NCBI-ProteinID: XP_048014858
LinkDB
Position
LG15:complement(29086757..29093762)
AA seq 305 aa
MSTQYSILFKQEHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTL
EGHQLGVVSVDISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWAVAFSPDSKY
IATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKHLATGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAF
SPDDTHFVSSSSDKSVKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHI
YDCPK
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagcacacagtacagtatactattcaagcaggagcatgctcatgaagatgccatctgg
acggcggcatggggtcgcagcgagaaagatgggtcagaaaccattgtgaccggctctttg
gacgacctggtaaaagtgtggaaatggtcggatgaaaagctggagctgcagtggacgcta
gagggtcaccagctgggcgtggtgtcggtggacatcagtcagaacggagcgatcgccgcc
tccagctctcttgacgctcacattcggctctgggacctggagactggtaaacagatcaag
tccatggacgcaggcccagttgatgcctgggcggtcgccttttctcctgactccaaatac
atcgccaccggcagccatctagggaaggtcaacatctttggcgtggaaagcgggaaaaag
gagcattcactggacaccagagggaaattcattctgagcatcgcctatagtccagatgga
aagcacttagccactggtgcaatagacggaatcattaatatctttgatattgcgactggg
aaactcctgcacacgctggaaggtcatgcgatgcctatcaggtctctgaccttttctcca
gactctcagctgctggtaaccgcgtcagacgatggctacatcaagatttatgacgtgcag
cacgctaacctggccgggacactcagcggtcacggatcctgggtgctgaacgtggccttt
tcacccgacgacacgcactttgtgtccagttcgtccgataagagtgtgaaggtgtgggac
acaagcagcagatcatgtgtgaacacgttctttgatcatcaggaccaggtttggagtgtg
aaatacaaccccacgggctcaaaaatcgtctctgcgggtgatgaccgagccatccacatt
tatgactgtccgaaatga

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