Megalobrama amblycephala (Wuchang bream): 125247549
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Entry
125247549 CDS
T08212
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04110
Cell cycle
mamb04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125247549 (smc1b)
04114 Oocyte meiosis
125247549 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125247549 (smc1b)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
125247549 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
125247549 (smc1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_13
Motif
Other DBs
NCBI-GeneID:
125247549
NCBI-ProteinID:
XP_048014864
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Position
LG15:complement(17847806..17860776)
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AA seq
1235 aa
AA seq
DB search
MGFLKQLDVENFKSWRGKQTIGPFKRFNCIIGTNGSGKSNVMDALGFVMGERAVNLRVKH
TRDLIHGAHIGKPVSNSATVTMIYCGDNNEEMTFSRCISGESSEYRVNGKQMTLAKYTGE
LAKIGIVVKAKNCLVYQGAVESIAMMNAKERTKMFERISGSGELSAEYDAKLAVLQKAKE
DTQFHFNRKKAATAEKKQVFKDKTEAEKYQALVDELRESKLQLTLFQLFHNEKNIDAQSD
SLRDVQEAAAQQKNSMDVWEQTVKARKKEHGRLNRELQQLEKEIRSQEQILNQQRPQYIR
AKVNTSHHEHKVEEARRSLQKNQNQQAKKEQELEELKRERTELEKAWKASERQMEEEEAQ
RGAGVQLEESQVERYKELKELARKKGAILNQSAEKLHWEVKADREKLQFDLRRKSEIQAN
IKHTQTRLEDFSVRAEKLEEYANTTKKVLEQQHQQEEQLAEELSTGFIRMEEVNEELAQV
LIKLQNARLDSQENRRQQKRDEVLESLRRLYPDTVYGRLVDLCQPIHKKYQLAVTKLFGK
NMNAIVVTSATVAHDCIRFLKEERAEPETFLPIDYIDVHPLNERLREVQGAKMVVDVVQC
AQNAPQLKRVIQYVCGNSLVCETLKDARRIAFDGPERLQTVALDGSLFRKSGVISGGSLD
LSKKARRWDEKDMNKLKEEKDKLSSELRALMKLKRKEVDLNQIRAQSQGNQTRLKYSNSE
LDSIRRKSIPACQAEISKLRSELSNLEAQIEIQTESVELKDNEMKATRDKIHQMEDVVFA
DFCGEIGVANIREYEQDYLRLQQELEKKRLQFESQHTRLNTQLEYEQAQLEKLVKQMKKI
EETIEKEENIVISLKEMEDRLLITVEQTQSNLLELNNQLSKKTTLVNNAKAELDKTLKGL
QERNRVLVKLQKETICAEAALEQLRLSRHNLLLGCKIDSLPLTLISGALDDISDIQLDSE
SQSISTLDIYEREAQMVFDYSTLDMGLKALTDESELEAQLEKLKEGISSMESMIMMSRAP
NLKALEKIREVKDSYREVMDAFETSTHTTKKCSQEFEQVKAKRFHLFSQCFERVSIVIDQ
IYKNLCRNASAQAILSAENPNEPYLDGINYNCVAPGKRFMAMDNLSGGEKAIAALALVFA
IHSFRPAPFFVLDEVDAALDNTNIGKVTGFFRMMSRESCQIIVISLKEEFYSRADALLGV
YSMFDECMFSRLLTLDLTPYPLNDENGTDGDGQMI
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcttaaaacaattagacgttgaaaatttcaaatcctggcgaggaaagcaaact
atcggcccatttaaaaggtttaattgcataattggcactaatggatcaggcaaatctaat
gtcatggatgctcttggatttgtgatgggagagagggctgtaaacctccgtgtcaagcac
accagagatctcatccacggtgcccacatcggcaaacccgtgtccaactccgccaccgtg
accatgatctactgtggagacaataatgaggaaatgacgttcagtagatgcatttcaggg
gaatcttctgagtatcgagtgaatggtaaacagatgactttggcgaagtacactggagag
ctggcgaagatcggcattgtggtgaaagcgaagaattgtctggtctatcagggtgctgtg
gagtcaattgccatgatgaatgccaaagaacgaacaaagatgtttgaacgaatcagtggc
tccggagagctgagcgctgaatatgatgctaagctggcggtcctgcagaaagccaaagag
gacacgcagttccactttaaccgcaagaaagcggctacagctgagaagaaacaagtcttc
aaggataagactgaggcggaaaaatatcaggcactggtggacgaactcagagaaagcaag
ctccagctgaccctttttcagctcttccacaatgagaaaaacatagatgcacagtcagat
tcactaagggacgtacaggaggccgcagcacagcagaagaacagcatggacgtctgggaa
caaactgtgaaggctcggaagaaagaacatgggcgcctgaaccgggaacttcagcagttg
gagaaggagatcagatctcaagagcagattcttaaccagcagaggcctcagtacatcaga
gctaaagtgaacacctcccaccatgagcacaaagtggaggaggcacgcagatcgcttcag
aagaaccagaatcagcaggccaaaaaggaacaggagctggaggagctaaagagagagcgg
actgagctggagaaggcctggaaggcctctgagaggcagatggaggaggaggaggctcaa
agaggagctggagtgcaactagaggagtcccaggtggagcggtataaggaactcaaagag
ctggccaggaaaaagggagccattttaaaccaaagcgcagagaagctgcactgggaggta
aaagcagaccgtgagaagctccagtttgacctgaggaggaaaagtgagatacaggcaaat
attaaacacactcaaactcggttggaagatttcagtgtaagggcagagaagctggaggag
tatgccaacactactaagaaagttctggagcagcagcatcagcaggaggaacagctggca
gaggagctgtcgacaggcttcatacgaatggaggaggtgaacgaggagctggcgcaggtg
ctgatcaagctgcagaacgctcgcctggacagccaagagaatcgacgacagcagaaacga
gatgaagtccttgaaagcctcaggagactctaccctgatacagtgtatggccgtctggtg
gacttgtgccagcccatacacaagaaataccagctcgccgtcaccaagctgtttggcaaa
aacatgaatgcaattgttgtgacatctgccacagtggctcatgactgcatccgatttctg
aaagaggaaagagctgaaccagagacatttcttcctattgactatatagatgtacatcct
ctgaacgagcgtctgagggaagtgcagggagccaagatggtggtggatgtggttcagtgc
gctcaaaacgcccctcagcttaagagagtgattcagtatgtgtgcggaaactccctggtc
tgcgagaccctgaaagacgcccgtcgcattgccttcgatggccctgagcgccttcagacg
gtggctcttgatggctccttgtttcgcaagtctggggtgatctctggaggctccttggac
ctgagcaagaaggctcgacgctgggatgagaaggacatgaataaactgaaagaggagaag
gataagctgtcatctgagctgcgtgccctgatgaagctgaagcgtaaggaagtggatttg
aatcagatcagggctcagtctcaaggaaaccagactcgcctcaaatactccaactcagaa
ctggactccattcgcaggaagagcatcccagcttgtcaggctgagatttccaaactcagg
agtgagctttccaacctcgaggcccagattgagatacagactgagagtgtagaactaaag
gataatgagatgaaggccaccagggacaaaattcatcagatggaggacgtggtgtttgcg
gatttctgcggagagatcggtgttgctaacatccgtgagtacgagcaggattatctgcga
ctgcagcaggagcttgagaagaagcgcctacagtttgagtcccagcatacccggctaaat
acccagctagagtatgaacaggctcagttggagaaactcgtcaaacagatgaagaagata
gaagagaccatcgaaaaagaggagaacattgttattagcttgaaagagatggaggacaga
cttttgataactgtagagcagacacaatcaaatcttctagaactgaacaaccagctgtca
aaaaagacaactttagttaacaacgccaaggcagagcttgacaagactcttaaaggcctc
caggagagaaacagggtactggtgaagcttcagaaggaaacaatctgcgctgaggcggcc
ctagaacagctgagactgagcagacacaacctgctgctgggctgtaagatagacagtcta
ccgttgaccctgatttcaggagcgctggatgacatcagtgatatacagctggactcagag
tctcagagcatcagcacactggatatttatgaacgagaggcgcagatggtgtttgactat
tcgacactggacatgggccttaaggccctcactgatgagagtgaattggaggctcagttg
gagaaactaaaagagggcatctcttctatggagtccatgatcatgatgtccagagctccc
aacctgaaagctctagaaaagatcagagaggttaaggacagctaccgggaagtaatggat
gcatttgagaccagcacacacaccactaagaaatgcagtcaggagtttgagcaagtgaag
gccaaacgcttccatctctttagtcagtgctttgaacgcgtgtctatcgtcatcgaccag
atctacaagaatctctgcagaaatgccagcgctcaggccattctcagtgcggagaatcca
aatgagccctacctcgatggcatcaactataactgtgtggctccggggaaacgattcatg
gccatggacaacctgtcaggaggagagaaggccatcgctgctctcgctttggtctttgcc
attcacagctttcgtcctgccccgttctttgtgctggatgaagtggatgctgccctggac
aacacaaacattggcaaggttacaggatttttccgaatgatgtccagagagagctgccag
atcattgtgatctccctgaaggaggagttctactctcgggcagacgctcttcttggagtc
tattccatgtttgatgaatgcatgttcagccgtcttctcactctggacctcaccccatac
ccactgaacgacgagaacggcacagacggagatggacaaatgatttaa
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